RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 NLGN2Q8NFZ4 835 aa24.74■■□□□ 1.55
LRRC23-204ENST00000428946 ATG3Q9NT62 314 aa24.74■■□□□ 1.55
LRRC23-204ENST00000428946 UTRNP46939 3433 aa24.73■■□□□ 1.55
LRRC23-204ENST00000428946 ATP6V1AP38606 617 aa24.72■■□□□ 1.55
LRRC23-204ENST00000428946 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
LRRC23-204ENST00000428946 KDRP35968 1356 aa24.7■■□□□ 1.55
LRRC23-204ENST00000428946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.7■■□□□ 1.54
LRRC23-204ENST00000428946 AMOTQ4VCS5 1084 aa24.7■■□□□ 1.54
LRRC23-204ENST00000428946 FLAD1Q8NFF5 587 aa24.7■■□□□ 1.54
LRRC23-204ENST00000428946 DCAF5Q96JK2 942 aa24.7■■□□□ 1.54
LRRC23-204ENST00000428946 HSP90AB1P08238 724 aaKnown RBP24.69■■□□□ 1.54
LRRC23-204ENST00000428946 GPR162Q16538 588 aa24.69■■□□□ 1.54
LRRC23-204ENST00000428946 VIRMAQ69YN4 1812 aaKnown RBP24.69■■□□□ 1.54
LRRC23-204ENST00000428946 SCN11AQ9UI33 1791 aa24.69■■□□□ 1.54
LRRC23-204ENST00000428946 COL5A3P25940 1745 aaPredicted RBP24.69■■□□□ 1.54
LRRC23-204ENST00000428946 ERVV-2B6SEH9 535 aa24.68■■□□□ 1.54
LRRC23-204ENST00000428946 GNPATO15228 680 aa24.68■■□□□ 1.54
LRRC23-204ENST00000428946 HMGB2P26583 209 aaKnown RBP24.68■■□□□ 1.54
LRRC23-204ENST00000428946 C1orf141Q5JVX7 400 aa24.68■■□□□ 1.54
LRRC23-204ENST00000428946 RBM42Q9BTD8 480 aaKnown RBP24.67■■□□□ 1.54
LRRC23-204ENST00000428946 HMOX1P09601 288 aa24.66■■□□□ 1.54
LRRC23-204ENST00000428946 CABP4P57796 275 aa24.66■■□□□ 1.54
LRRC23-204ENST00000428946 SLC4A9Q96Q91 983 aa24.66■■□□□ 1.54
LRRC23-204ENST00000428946 ZNF831Q5JPB2 1677 aa24.66■■□□□ 1.54
LRRC23-204ENST00000428946 SSFA2P28290 1259 aa24.65■■□□□ 1.54
LRRC23-204ENST00000428946 DIAPH1O60610 1272 aaKnown RBP24.64■■□□□ 1.54
LRRC23-204ENST00000428946 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
LRRC23-204ENST00000428946 MYH14Q7Z406 1995 aaKnown RBP24.62■■□□□ 1.53
LRRC23-204ENST00000428946 TJP1Q07157 1748 aa24.61■■□□□ 1.53
LRRC23-204ENST00000428946 COL3A1P02461 1466 aaPredicted RBP24.6■■□□□ 1.53
LRRC23-204ENST00000428946 GOLGB1Q14789 3259 aaKnown RBP24.6■■□□□ 1.53
LRRC23-204ENST00000428946 YBX3P16989 372 aaKnown RBP eCLIP24.6■■□□□ 1.53
LRRC23-204ENST00000428946 PPP2R1AP30153 589 aa24.6■■□□□ 1.53
LRRC23-204ENST00000428946 DDX10Q13206 875 aaKnown RBP24.6■■□□□ 1.53
LRRC23-204ENST00000428946 ZNF784Q8NCA9 323 aaPredicted RBP24.6■■□□□ 1.53
LRRC23-204ENST00000428946 NFATC2IPQ8NCF5 419 aa24.6■■□□□ 1.53
LRRC23-204ENST00000428946 C4AP0C0L4 1744 aa24.6■■□□□ 1.53
LRRC23-204ENST00000428946 PTCD1O75127 700 aaKnown RBP24.59■■□□□ 1.53
LRRC23-204ENST00000428946 RTCBQ9Y3I0 505 aaKnown RBP24.57■■□□□ 1.52
LRRC23-204ENST00000428946 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
LRRC23-204ENST00000428946 AKAP4Q5JQC9 854 aa24.56■■□□□ 1.52
LRRC23-204ENST00000428946 CD2APQ9Y5K6 639 aa24.56■■□□□ 1.52
LRRC23-204ENST00000428946 CNTNAP4Q9C0A0 1308 aa24.56■■□□□ 1.52
LRRC23-204ENST00000428946 LGR6Q9HBX8 967 aa24.55■■□□□ 1.52
LRRC23-204ENST00000428946 WWC3Q9ULE0 1092 aa24.55■■□□□ 1.52
LRRC23-204ENST00000428946 MRC1P22897 1456 aa24.54■■□□□ 1.52
LRRC23-204ENST00000428946 MTHFSDQ2M296 383 aaKnown RBP24.54■■□□□ 1.52
LRRC23-204ENST00000428946 CFAP53Q96M91 514 aa24.54■■□□□ 1.52
LRRC23-204ENST00000428946 CICQ96RK0 1608 aaPredicted RBP24.53■■□□□ 1.52
LRRC23-204ENST00000428946 TRAPPC3LQ5T215 181 aa24.53■■□□□ 1.52
LRRC23-204ENST00000428946 ADAMTS7Q9UKP4 1686 aa24.53■■□□□ 1.52
LRRC23-204ENST00000428946 MMP10P09238 476 aa24.52■■□□□ 1.52
LRRC23-204ENST00000428946 ARHGEF1Q92888 912 aaKnown RBP24.52■■□□□ 1.52
LRRC23-204ENST00000428946 RNMTO43148 476 aaKnown RBP24.51■■□□□ 1.51
LRRC23-204ENST00000428946 RC3H1Q5TC82 1133 aaKnown RBP24.51■■□□□ 1.51
LRRC23-204ENST00000428946 SLC52A2Q9HAB3 445 aa24.51■■□□□ 1.51
LRRC23-204ENST00000428946 CRKLP46109 303 aaKnown RBP24.5■■□□□ 1.51
LRRC23-204ENST00000428946 RPS6KA4O75676 772 aa24.49■■□□□ 1.51
LRRC23-204ENST00000428946 SLC39A6Q13433 755 aa24.49■■□□□ 1.51
LRRC23-204ENST00000428946 N4BP2Q86UW6 1770 aaPredicted RBP24.49■■□□□ 1.51
LRRC23-204ENST00000428946 KIF13BQ9NQT8 1826 aa24.49■■□□□ 1.51
LRRC23-204ENST00000428946 ADRA2BP18089 450 aa24.48■■□□□ 1.51
LRRC23-204ENST00000428946 RFC4P35249 363 aa24.48■■□□□ 1.51
LRRC23-204ENST00000428946 KCPQ6ZWJ8 1503 aa24.48■■□□□ 1.51
LRRC23-204ENST00000428946 KIAA1551Q9HCM1 1747 aa24.48■■□□□ 1.51
LRRC23-204ENST00000428946 GRIN3BO60391 1043 aa24.47■■□□□ 1.51
LRRC23-204ENST00000428946 GYS1P13807 737 aa24.46■■□□□ 1.51
LRRC23-204ENST00000428946 DNAJC10Q8IXB1 793 aa24.46■■□□□ 1.51
LRRC23-204ENST00000428946 NUDCQ9Y266 331 aa24.46■■□□□ 1.51
LRRC23-204ENST00000428946 UBR2Q8IWV8 1755 aa24.46■■□□□ 1.51
LRRC23-204ENST00000428946 SRP68Q9UHB9 627 aaKnown RBP24.45■■□□□ 1.5
LRRC23-204ENST00000428946 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
LRRC23-204ENST00000428946 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
LRRC23-204ENST00000428946 NLGN1Q8N2Q7 840 aa24.43■■□□□ 1.5
LRRC23-204ENST00000428946 SIPA1L3O60292 1781 aaPredicted RBP24.43■■□□□ 1.5
LRRC23-204ENST00000428946 PXDNLA1KZ92 1463 aa24.43■■□□□ 1.5
LRRC23-204ENST00000428946 C10orf71Q711Q0 1435 aa24.43■■□□□ 1.5
LRRC23-204ENST00000428946 INTS5Q6P9B9 1019 aaKnown RBP24.42■■□□□ 1.5
LRRC23-204ENST00000428946 RSPH6AQ9H0K4 717 aa24.42■■□□□ 1.5
LRRC23-204ENST00000428946 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
LRRC23-204ENST00000428946 RALBP1Q15311 655 aa24.41■■□□□ 1.5
LRRC23-204ENST00000428946 PHACTR3Q96KR7 559 aa24.41■■□□□ 1.5
LRRC23-204ENST00000428946 CCDC87Q9NVE4 849 aa24.4■■□□□ 1.5
LRRC23-204ENST00000428946 USP42Q9H9J4 1324 aaKnown RBP24.39■■□□□ 1.5
LRRC23-204ENST00000428946 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.49
LRRC23-204ENST00000428946 FKBP8Q14318 412 aa24.38■■□□□ 1.49
LRRC23-204ENST00000428946 PARP3Q9Y6F1 533 aa24.38■■□□□ 1.49
LRRC23-204ENST00000428946 SOS1Q07889 1333 aaPredicted RBP24.37■■□□□ 1.49
LRRC23-204ENST00000428946 BRCA1P38398 1863 aaKnown RBP24.37■■□□□ 1.49
LRRC23-204ENST00000428946 CYP19A1P11511 503 aaPredicted RBP24.37■■□□□ 1.49
LRRC23-204ENST00000428946 IL17REQ8NFR9 667 aa24.37■■□□□ 1.49
LRRC23-204ENST00000428946 ZBTB1Q9Y2K1 713 aa24.37■■□□□ 1.49
LRRC23-204ENST00000428946 A0A0G2JLW4 131 aa24.36■■□□□ 1.49
LRRC23-204ENST00000428946 GNAT3A8MTJ3 354 aa24.36■■□□□ 1.49
LRRC23-204ENST00000428946 FCHSD2O94868 740 aa24.36■■□□□ 1.49
LRRC23-204ENST00000428946 ATP10DQ9P241 1426 aa24.35■■□□□ 1.49
LRRC23-204ENST00000428946 DDR1Q08345 913 aa24.35■■□□□ 1.49
LRRC23-204ENST00000428946 TEFQ10587 303 aa24.35■■□□□ 1.49
LRRC23-204ENST00000428946 COL15A1P39059 1388 aa24.34■■□□□ 1.49
LRRC23-204ENST00000428946 TTC5Q8N0Z6 440 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms