RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 STAP2Q9UGK3 403 aa9.67□□□□□ -0.86
LRCH3-204ENST00000428136 EPB41L2O43491 1005 aaKnown RBP9.67□□□□□ -0.86
LRCH3-204ENST00000428136 ATP8B2P98198 1209 aa9.67□□□□□ -0.86
LRCH3-204ENST00000428136 FOXD4L1Q9NU39 408 aa9.66□□□□□ -0.86
LRCH3-204ENST00000428136 LMBRD1Q9NUN5 540 aa9.66□□□□□ -0.86
LRCH3-204ENST00000428136 AMOTL2Q9Y2J4 779 aa9.66□□□□□ -0.86
LRCH3-204ENST00000428136 AOX1Q06278 1338 aa9.66□□□□□ -0.86
LRCH3-204ENST00000428136 MIS18AQ9NYP9 233 aa9.66□□□□□ -0.86
LRCH3-204ENST00000428136 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-204ENST00000428136 GNAI3P08754 354 aa9.65□□□□□ -0.86
LRCH3-204ENST00000428136 CCDC30Q5VVM6 783 aa9.65□□□□□ -0.86
LRCH3-204ENST00000428136 ANAPC15P60006 121 aa9.65□□□□□ -0.86
LRCH3-204ENST00000428136 ZDHHC9Q9Y397 364 aa9.65□□□□□ -0.86
LRCH3-204ENST00000428136 MED1Q15648 1581 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-204ENST00000428136 GNAT3A8MTJ3 354 aa9.65□□□□□ -0.87
LRCH3-204ENST00000428136 F6X3S4 739 aa9.65□□□□□ -0.87
LRCH3-204ENST00000428136 MCM2P49736 904 aa9.65□□□□□ -0.87
LRCH3-204ENST00000428136 FLIIQ13045 1269 aa9.65□□□□□ -0.87
LRCH3-204ENST00000428136 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 STK31Q9BXU1 1019 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 SRCIN1Q9C0H9 1055 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 ESPNB1AK53 854 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 CCDC173Q0VFZ6 552 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 CUL4AQ13619 759 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 MAP3K5Q99683 1374 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 AK9Q5TCS8 1911 aa9.64□□□□□ -0.87
LRCH3-204ENST00000428136 HOXC9P31274 260 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 DDX49Q9Y6V7 483 aaKnown RBP9.63□□□□□ -0.87
LRCH3-204ENST00000428136 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 AMPHP49418 695 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 PKP1Q13835 747 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 SLC4A10Q6U841 1118 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 ARXQ96QS3 562 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
LRCH3-204ENST00000428136 PNMA6EA0A0J9YXQ4 647 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 MX1P20591 662 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 CHMLP26374 656 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 TAF7Q15545 349 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-204ENST00000428136 ZGPATQ8N5A5 531 aaKnown RBP9.62□□□□□ -0.87
LRCH3-204ENST00000428136 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
LRCH3-204ENST00000428136 PHRF1Q9P1Y6 1649 aaKnown RBP9.62□□□□□ -0.87
LRCH3-204ENST00000428136 CRYBG1Q9Y4K1 1723 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 NUTM2FA1L443 756 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 MCTP1Q6DN14 999 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 SSH3Q8TE77 659 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
LRCH3-204ENST00000428136 POLA2Q14181 598 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
LRCH3-204ENST00000428136 USP44Q9H0E7 712 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 EXOC6BQ9Y2D4 811 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 APBB1O00213 710 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 ZSCAN23Q3MJ62 389 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 RAB11FIP3O75154 756 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 NASPP49321 788 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-204ENST00000428136 HS1BP3Q53T59 392 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
LRCH3-204ENST00000428136 PLEKHG5O94827 1062 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 BRD1O95696 1058 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 HOXB7P09629 217 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 FKBP5Q13451 457 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-204ENST00000428136 GPT2Q8TD30 523 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 PLPPR3Q6T4P5 718 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 NFAT5O94916 1531 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 MCCP23508 829 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 NLRP6P59044 892 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 PDLIM2Q96JY6 352 aa9.6□□□□□ -0.87
LRCH3-204ENST00000428136 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
LRCH3-204ENST00000428136 TRIM44Q96DX7 344 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-204ENST00000428136 LRRFIP2Q9Y608 721 aaKnown RBP9.59□□□□□ -0.87
LRCH3-204ENST00000428136 USP42Q9H9J4 1324 aaKnown RBP9.59□□□□□ -0.87
LRCH3-204ENST00000428136 LTN1O94822 1766 aa9.59□□□□□ -0.87
LRCH3-204ENST00000428136 SOX12O15370 315 aa9.59□□□□□ -0.87
LRCH3-204ENST00000428136 NEK4P51957 841 aa9.59□□□□□ -0.87
LRCH3-204ENST00000428136 THEMISQ8N1K5 641 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-204ENST00000428136 PALD1Q9ULE6 856 aa9.59□□□□□ -0.87
LRCH3-204ENST00000428136 ADGRL3Q9HAR2 1447 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 HSPA4P34932 840 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 CAVIN1Q6NZI2 390 aaKnown RBP9.58□□□□□ -0.88
LRCH3-204ENST00000428136 CHMP4AQ9BY43 222 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 NCAPD2Q15021 1401 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 FER1L4A9Z1Z3 1794 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 LMTK3Q96Q04 1460 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
LRCH3-204ENST00000428136 UBTFL1P0CB47 393 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-204ENST00000428136 CEBPAP49715 358 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-204ENST00000428136 PI4K2BQ8TCG2 481 aa9.58□□□□□ -0.88
LRCH3-204ENST00000428136 MBD3O95983 291 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 UNC5CLQ8IV45 518 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 OVOS2A0A0G2JMS6 1433 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 EIF4A1P60842 406 aaKnown RBP9.57□□□□□ -0.88
LRCH3-204ENST00000428136 TSHZ3Q63HK5 1081 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 LRSAM1Q6UWE0 723 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 ZSCAN30Q86W11 494 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 IP6K1Q92551 441 aa9.57□□□□□ -0.88
LRCH3-204ENST00000428136 CHD2O14647 1828 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms