RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 QSER1Q2KHR3 1735 aa22.32■■□□□ 1.16
VRK2-204ENST00000428021 ZNF316A6NFI3 1004 aaPredicted RBP22.32■■□□□ 1.16
VRK2-204ENST00000428021 GAS2L2Q8NHY3 880 aa22.31■■□□□ 1.16
VRK2-204ENST00000428021 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
VRK2-204ENST00000428021 MRC1P22897 1456 aa22.3■■□□□ 1.16
VRK2-204ENST00000428021 SLC4A9Q96Q91 983 aa22.3■■□□□ 1.16
VRK2-204ENST00000428021 SLC52A2Q9HAB3 445 aa22.3■■□□□ 1.16
VRK2-204ENST00000428021 PNPLA7Q6ZV29 1317 aa22.3■■□□□ 1.16
VRK2-204ENST00000428021 ZBTB7AO95365 584 aa22.29■■□□□ 1.16
VRK2-204ENST00000428021 ITPK1Q13572 414 aa22.29■■□□□ 1.16
VRK2-204ENST00000428021 PRKRIP1Q9H875 184 aaPredicted RBP22.29■■□□□ 1.16
VRK2-204ENST00000428021 SPON1Q9HCB6 807 aa22.29■■□□□ 1.16
VRK2-204ENST00000428021 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
VRK2-204ENST00000428021 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
VRK2-204ENST00000428021 IL17REQ8NFR9 667 aa22.28■■□□□ 1.16
VRK2-204ENST00000428021 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
VRK2-204ENST00000428021 GNAT3A8MTJ3 354 aa22.27■■□□□ 1.16
VRK2-204ENST00000428021 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
VRK2-204ENST00000428021 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
VRK2-204ENST00000428021 HMGB2P26583 209 aaKnown RBP22.26■■□□□ 1.15
VRK2-204ENST00000428021 ATP6V1AP38606 617 aa22.26■■□□□ 1.15
VRK2-204ENST00000428021 PLEKHF1Q96S99 279 aa22.25■■□□□ 1.15
VRK2-204ENST00000428021 RBM42Q9BTD8 480 aaKnown RBP22.25■■□□□ 1.15
VRK2-204ENST00000428021 ATF5Q9Y2D1 282 aaPredicted RBP22.25■■□□□ 1.15
VRK2-204ENST00000428021 PTGER2P43116 358 aa22.24■■□□□ 1.15
VRK2-204ENST00000428021 AMIGO3Q86WK7 504 aa22.24■■□□□ 1.15
VRK2-204ENST00000428021 MTFR1LQ9H019 292 aa22.24■■□□□ 1.15
VRK2-204ENST00000428021 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
VRK2-204ENST00000428021 COL23A1Q86Y22 540 aaPredicted RBP22.23■■□□□ 1.15
VRK2-204ENST00000428021 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
VRK2-204ENST00000428021 SGIP1Q9BQI5 828 aa22.22■■□□□ 1.15
VRK2-204ENST00000428021 CEMIPQ8WUJ3 1361 aa22.22■■□□□ 1.15
VRK2-204ENST00000428021 SIPA1L3O60292 1781 aaPredicted RBP22.22■■□□□ 1.15
VRK2-204ENST00000428021 SLC39A6Q13433 755 aa22.21■■□□□ 1.15
VRK2-204ENST00000428021 SLC16A10Q8TF71 515 aa22.21■■□□□ 1.15
VRK2-204ENST00000428021 COL5A3P25940 1745 aaPredicted RBP22.2■■□□□ 1.14
VRK2-204ENST00000428021 SMIM5Q71RC9 77 aa22.2■■□□□ 1.14
VRK2-204ENST00000428021 AK7Q96M32 723 aa22.2■■□□□ 1.14
VRK2-204ENST00000428021 COL24A1Q17RW2 1714 aa22.19■■□□□ 1.14
VRK2-204ENST00000428021 TJP1Q07157 1748 aa22.18■■□□□ 1.14
VRK2-204ENST00000428021 CICQ96RK0 1608 aaPredicted RBP22.18■■□□□ 1.14
VRK2-204ENST00000428021 KCPQ6ZWJ8 1503 aa22.18■■□□□ 1.14
VRK2-204ENST00000428021 TEFQ10587 303 aa22.18■■□□□ 1.14
VRK2-204ENST00000428021 RC3H1Q5TC82 1133 aaKnown RBP22.17■■□□□ 1.14
VRK2-204ENST00000428021 FLAD1Q8NFF5 587 aa22.17■■□□□ 1.14
VRK2-204ENST00000428021 MYH14Q7Z406 1995 aaKnown RBP22.17■■□□□ 1.14
VRK2-204ENST00000428021 DLG5Q8TDM6 1919 aa22.17■■□□□ 1.14
VRK2-204ENST00000428021 UBR2Q8IWV8 1755 aa22.17■■□□□ 1.14
VRK2-204ENST00000428021 GNPATO15228 680 aa22.16■■□□□ 1.14
VRK2-204ENST00000428021 HTATSF1O43719 755 aaKnown RBP22.16■■□□□ 1.14
VRK2-204ENST00000428021 MCM10Q7L590 875 aa22.16■■□□□ 1.14
VRK2-204ENST00000428021 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
VRK2-204ENST00000428021 CNTNAP4Q9C0A0 1308 aa22.15■■□□□ 1.14
VRK2-204ENST00000428021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.15■■□□□ 1.14
VRK2-204ENST00000428021 MSH5O43196 834 aa22.15■■□□□ 1.14
VRK2-204ENST00000428021 SSFA2P28290 1259 aa22.15■■□□□ 1.14
VRK2-204ENST00000428021 DCTN1Q14203 1278 aa22.15■■□□□ 1.14
VRK2-204ENST00000428021 PPP1R1BQ9UD71 204 aaPredicted RBP22.15■■□□□ 1.14
VRK2-204ENST00000428021 PHF14O94880 888 aa22.14■■□□□ 1.13
VRK2-204ENST00000428021 NEFMP07197 916 aa22.14■■□□□ 1.13
VRK2-204ENST00000428021 NFE2L2Q16236 605 aa22.14■■□□□ 1.13
VRK2-204ENST00000428021 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.13
VRK2-204ENST00000428021 ZNF790Q6PG37 636 aa22.13■■□□□ 1.13
VRK2-204ENST00000428021 DNAJC10Q8IXB1 793 aa22.13■■□□□ 1.13
VRK2-204ENST00000428021 CRKLP46109 303 aaKnown RBP22.12■■□□□ 1.13
VRK2-204ENST00000428021 MAPK8IP3Q9UPT6 1336 aa22.11■■□□□ 1.13
VRK2-204ENST00000428021 KCNQ3O43525 872 aa22.11■■□□□ 1.13
VRK2-204ENST00000428021 RPS6KA4O75676 772 aa22.11■■□□□ 1.13
VRK2-204ENST00000428021 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
VRK2-204ENST00000428021 ZNF496Q96IT1 587 aaPredicted RBP22.11■■□□□ 1.13
VRK2-204ENST00000428021 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
VRK2-204ENST00000428021 RTCBQ9Y3I0 505 aaKnown RBP22.11■■□□□ 1.13
VRK2-204ENST00000428021 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
VRK2-204ENST00000428021 CYP19A1P11511 503 aaPredicted RBP22.1■■□□□ 1.13
VRK2-204ENST00000428021 MSL1Q68DK7 614 aa22.1■■□□□ 1.13
VRK2-204ENST00000428021 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
VRK2-204ENST00000428021 TTC5Q8N0Z6 440 aa22.1■■□□□ 1.13
VRK2-204ENST00000428021 ARXQ96QS3 562 aa22.1■■□□□ 1.13
VRK2-204ENST00000428021 WDR43Q15061 677 aaKnown RBP eCLIP22.09■■□□□ 1.13
VRK2-204ENST00000428021 CCDC184Q52MB2 194 aa22.09■■□□□ 1.13
VRK2-204ENST00000428021 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
VRK2-204ENST00000428021 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.13
VRK2-204ENST00000428021 POLD1P28340 1107 aa22.07■■□□□ 1.12
VRK2-204ENST00000428021 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
VRK2-204ENST00000428021 HEG1Q9ULI3 1381 aa22.07■■□□□ 1.12
VRK2-204ENST00000428021 ADRA2BP18089 450 aa22.06■■□□□ 1.12
VRK2-204ENST00000428021 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
VRK2-204ENST00000428021 TAF7Q15545 349 aaPredicted RBP22.06■■□□□ 1.12
VRK2-204ENST00000428021 THUMPD2Q9BTF0 503 aaKnown RBP22.06■■□□□ 1.12
VRK2-204ENST00000428021 FHDC1Q9C0D6 1143 aaPredicted RBP22.06■■□□□ 1.12
VRK2-204ENST00000428021 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
VRK2-204ENST00000428021 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
VRK2-204ENST00000428021 FMNL2Q96PY5 1086 aa22.05■■□□□ 1.12
VRK2-204ENST00000428021 C4AP0C0L4 1744 aa22.04■■□□□ 1.12
VRK2-204ENST00000428021 RIPK4P57078 832 aa22.04■■□□□ 1.12
VRK2-204ENST00000428021 SYT17Q9BSW7 474 aa22.04■■□□□ 1.12
VRK2-204ENST00000428021 MIS18AQ9NYP9 233 aa22.04■■□□□ 1.12
VRK2-204ENST00000428021 ANP32CO43423 234 aa22.03■■□□□ 1.12
VRK2-204ENST00000428021 SOS1Q07889 1333 aaPredicted RBP22.03■■□□□ 1.12
VRK2-204ENST00000428021 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 854.3 ms