RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 NEFMP07197 916 aa11.79□□□□□ -0.52
VSIG4-203ENST00000427538 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
VSIG4-203ENST00000427538 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
VSIG4-203ENST00000427538 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
VSIG4-203ENST00000427538 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
VSIG4-203ENST00000427538 MYBBP1AQ9BQG0 1328 aaKnown RBP11.78□□□□□ -0.52
VSIG4-203ENST00000427538 PARD3Q8TEW0 1356 aa11.78□□□□□ -0.52
VSIG4-203ENST00000427538 HMOX1P09601 288 aa11.77□□□□□ -0.53
VSIG4-203ENST00000427538 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
VSIG4-203ENST00000427538 IL13P35225 146 aa11.77□□□□□ -0.53
VSIG4-203ENST00000427538 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
VSIG4-203ENST00000427538 PLEKHO1Q53GL0 409 aaPredicted RBP11.77□□□□□ -0.53
VSIG4-203ENST00000427538 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
VSIG4-203ENST00000427538 RGPD5Q99666 1765 aa11.77□□□□□ -0.53
VSIG4-203ENST00000427538 MAP2P11137 1827 aaKnown RBP11.76□□□□□ -0.53
VSIG4-203ENST00000427538 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
VSIG4-203ENST00000427538 PRKRIP1Q9H875 184 aaPredicted RBP11.76□□□□□ -0.53
VSIG4-203ENST00000427538 PEAK1Q9H792 1746 aa11.76□□□□□ -0.53
VSIG4-203ENST00000427538 IGSF1Q8N6C5 1336 aa11.76□□□□□ -0.53
VSIG4-203ENST00000427538 PCDH11XQ9BZA7 1347 aa11.76□□□□□ -0.53
VSIG4-203ENST00000427538 PCDH11YQ9BZA8 1340 aa11.76□□□□□ -0.53
VSIG4-203ENST00000427538 OVOS2A0A0G2JMS6 1433 aa11.76□□□□□ -0.53
VSIG4-203ENST00000427538 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
VSIG4-203ENST00000427538 TRIM37O94972 964 aa11.75□□□□□ -0.53
VSIG4-203ENST00000427538 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
VSIG4-203ENST00000427538 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
VSIG4-203ENST00000427538 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
VSIG4-203ENST00000427538 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
VSIG4-203ENST00000427538 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
VSIG4-203ENST00000427538 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
VSIG4-203ENST00000427538 BAG6P46379 1132 aa11.74□□□□□ -0.53
VSIG4-203ENST00000427538 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
VSIG4-203ENST00000427538 PNNQ9H307 717 aaKnown RBP11.74□□□□□ -0.53
VSIG4-203ENST00000427538 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
VSIG4-203ENST00000427538 APBA3O96018 575 aa11.73□□□□□ -0.53
VSIG4-203ENST00000427538 AEBP1Q8IUX7 1158 aa11.73□□□□□ -0.53
VSIG4-203ENST00000427538 IFNL2Q8IZJ0 200 aa11.73□□□□□ -0.53
VSIG4-203ENST00000427538 ACSBG1Q96GR2 724 aa11.73□□□□□ -0.53
VSIG4-203ENST00000427538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.73□□□□□ -0.53
VSIG4-203ENST00000427538 THSD7AQ9UPZ6 1657 aa11.73□□□□□ -0.53
VSIG4-203ENST00000427538 MEGF6O75095 1541 aa11.72□□□□□ -0.53
VSIG4-203ENST00000427538 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
VSIG4-203ENST00000427538 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
VSIG4-203ENST00000427538 MAPK8IP3Q9UPT6 1336 aa11.7□□□□□ -0.54
VSIG4-203ENST00000427538 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
VSIG4-203ENST00000427538 FCHSD2O94868 740 aa11.7□□□□□ -0.54
VSIG4-203ENST00000427538 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
VSIG4-203ENST00000427538 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
VSIG4-203ENST00000427538 LRRC37A3O60309 1634 aa11.69□□□□□ -0.54
VSIG4-203ENST00000427538 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
VSIG4-203ENST00000427538 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
VSIG4-203ENST00000427538 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
VSIG4-203ENST00000427538 CYP27B1O15528 508 aa11.68□□□□□ -0.54
VSIG4-203ENST00000427538 PHKG2P15735 406 aa11.68□□□□□ -0.54
VSIG4-203ENST00000427538 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
VSIG4-203ENST00000427538 MPRIPQ6WCQ1 1025 aa11.68□□□□□ -0.54
VSIG4-203ENST00000427538 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
VSIG4-203ENST00000427538 KDRP35968 1356 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 KCNQ2O43526 872 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
VSIG4-203ENST00000427538 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 DEFB132Q7Z7B7 95 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
VSIG4-203ENST00000427538 RNF25Q96BH1 459 aaPredicted RBP11.67□□□□□ -0.54
VSIG4-203ENST00000427538 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 NCAPD2Q15021 1401 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
VSIG4-203ENST00000427538 COL3A1P02461 1466 aaPredicted RBP11.66□□□□□ -0.54
VSIG4-203ENST00000427538 CABP4P57796 275 aa11.66□□□□□ -0.54
VSIG4-203ENST00000427538 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
VSIG4-203ENST00000427538 DIEXFQ68CQ4 756 aaKnown RBP11.66□□□□□ -0.54
VSIG4-203ENST00000427538 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
VSIG4-203ENST00000427538 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
VSIG4-203ENST00000427538 BCL9O00512 1426 aa11.65□□□□□ -0.54
VSIG4-203ENST00000427538 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.55
VSIG4-203ENST00000427538 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
VSIG4-203ENST00000427538 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
VSIG4-203ENST00000427538 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
VSIG4-203ENST00000427538 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
VSIG4-203ENST00000427538 ERVV-2B6SEH9 535 aa11.63□□□□□ -0.55
VSIG4-203ENST00000427538 PLSCR1O15162 318 aa11.63□□□□□ -0.55
VSIG4-203ENST00000427538 HMGB2P26583 209 aaKnown RBP11.63□□□□□ -0.55
VSIG4-203ENST00000427538 TEFQ10587 303 aa11.63□□□□□ -0.55
VSIG4-203ENST00000427538 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
VSIG4-203ENST00000427538 EP400Q96L91 3159 aa11.63□□□□□ -0.55
VSIG4-203ENST00000427538 PTF1AQ7RTS3 328 aa11.62□□□□□ -0.55
VSIG4-203ENST00000427538 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
VSIG4-203ENST00000427538 PHACTR3Q96KR7 559 aa11.62□□□□□ -0.55
VSIG4-203ENST00000427538 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
VSIG4-203ENST00000427538 RNMTO43148 476 aaKnown RBP11.61□□□□□ -0.55
VSIG4-203ENST00000427538 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
VSIG4-203ENST00000427538 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
VSIG4-203ENST00000427538 MAP3K5Q99683 1374 aa11.61□□□□□ -0.55
VSIG4-203ENST00000427538 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
VSIG4-203ENST00000427538 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
VSIG4-203ENST00000427538 TXNRD1Q16881 649 aa11.6□□□□□ -0.55
VSIG4-203ENST00000427538 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
VSIG4-203ENST00000427538 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms