RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CCDC30Q5VVM6 783 aa33.7■■■□□ 2.99
SH3GL3-202ENST00000427482 STK31Q9BXU1 1019 aa33.69■■■□□ 2.98
SH3GL3-202ENST00000427482 INTS3Q68E01 1043 aaKnown RBP33.69■■■□□ 2.98
SH3GL3-202ENST00000427482 BTBD11A6QL63 1104 aa33.68■■■□□ 2.98
SH3GL3-202ENST00000427482 EIF4A1P60842 406 aaKnown RBP33.68■■■□□ 2.98
SH3GL3-202ENST00000427482 COL22A1Q8NFW1 1626 aaPredicted RBP33.67■■■□□ 2.98
SH3GL3-202ENST00000427482 KDM6AO15550 1401 aaPredicted RBP33.65■■■□□ 2.98
SH3GL3-202ENST00000427482 HOXB7P09629 217 aa33.65■■■□□ 2.98
SH3GL3-202ENST00000427482 PHKG2P15735 406 aa33.65■■■□□ 2.98
SH3GL3-202ENST00000427482 G2E3Q7L622 706 aa33.65■■■□□ 2.98
SH3GL3-202ENST00000427482 N4BP2Q86UW6 1770 aaPredicted RBP33.63■■■□□ 2.97
SH3GL3-202ENST00000427482 RGS3P49796 1198 aa33.63■■■□□ 2.97
SH3GL3-202ENST00000427482 KCNQ3O43525 872 aa33.63■■■□□ 2.97
SH3GL3-202ENST00000427482 PDE4AP27815 886 aa33.63■■■□□ 2.97
SH3GL3-202ENST00000427482 IFNL2Q8IZJ0 200 aa33.62■■■□□ 2.97
SH3GL3-202ENST00000427482 TOM1L2Q6ZVM7 507 aa33.61■■■□□ 2.97
SH3GL3-202ENST00000427482 HDGFL1Q5TGJ6 251 aa33.6■■■□□ 2.97
SH3GL3-202ENST00000427482 MRC1P22897 1456 aa33.6■■■□□ 2.97
SH3GL3-202ENST00000427482 BACH2Q9BYV9 841 aa33.6■■■□□ 2.97
SH3GL3-202ENST00000427482 NECTIN2Q92692 538 aa33.59■■■□□ 2.97
SH3GL3-202ENST00000427482 PDZRN3Q9UPQ7 1066 aa33.59■■■□□ 2.97
SH3GL3-202ENST00000427482 COL14A1Q05707 1796 aaKnown RBP33.58■■■□□ 2.97
SH3GL3-202ENST00000427482 FLIIQ13045 1269 aa33.58■■■□□ 2.97
SH3GL3-202ENST00000427482 HEG1Q9ULI3 1381 aa33.57■■■□□ 2.96
SH3GL3-202ENST00000427482 CYP27B1O15528 508 aa33.57■■■□□ 2.96
SH3GL3-202ENST00000427482 CARD10Q9BWT7 1032 aa33.57■■■□□ 2.96
SH3GL3-202ENST00000427482 CHMP4AQ9BY43 222 aa33.57■■■□□ 2.96
SH3GL3-202ENST00000427482 SMC5Q8IY18 1101 aa33.56■■■□□ 2.96
SH3GL3-202ENST00000427482 SLC52A2Q9HAB3 445 aa33.56■■■□□ 2.96
SH3GL3-202ENST00000427482 PHLPP1O60346 1717 aa33.55■■■□□ 2.96
SH3GL3-202ENST00000427482 SHANK3Q9BYB0 1731 aa33.55■■■□□ 2.96
SH3GL3-202ENST00000427482 C1orf115Q9H7X2 142 aa33.55■■■□□ 2.96
SH3GL3-202ENST00000427482 COL16A1Q07092 1604 aaPredicted RBP33.54■■■□□ 2.96
SH3GL3-202ENST00000427482 DCAF5Q96JK2 942 aa33.53■■■□□ 2.96
SH3GL3-202ENST00000427482 HSP90AB1P08238 724 aaKnown RBP33.53■■■□□ 2.96
SH3GL3-202ENST00000427482 CCT4P50991 539 aaKnown RBP33.52■■■□□ 2.96
SH3GL3-202ENST00000427482 PXDNLA1KZ92 1463 aa33.52■■■□□ 2.96
SH3GL3-202ENST00000427482 F6X3S4 739 aa33.51■■■□□ 2.96
SH3GL3-202ENST00000427482 FKBP5Q13451 457 aaPredicted RBP33.51■■■□□ 2.96
SH3GL3-202ENST00000427482 STRN4Q9NRL3 753 aa33.51■■■□□ 2.96
SH3GL3-202ENST00000427482 EVA1CP58658 441 aa33.51■■■□□ 2.95
SH3GL3-202ENST00000427482 LARP1Q6PKG0 1096 aaKnown RBP33.51■■■□□ 2.95
SH3GL3-202ENST00000427482 EIF2S2P20042 333 aaKnown RBP33.5■■■□□ 2.95
SH3GL3-202ENST00000427482 PCDH11XQ9BZA7 1347 aa33.49■■■□□ 2.95
SH3GL3-202ENST00000427482 PCDH11YQ9BZA8 1340 aa33.49■■■□□ 2.95
SH3GL3-202ENST00000427482 GIGYF1O75420 1035 aaPredicted RBP33.49■■■□□ 2.95
SH3GL3-202ENST00000427482 C5P01031 1676 aa33.48■■■□□ 2.95
SH3GL3-202ENST00000427482 IL2RBP14784 551 aa33.48■■■□□ 2.95
SH3GL3-202ENST00000427482 SLC4A10Q6U841 1118 aa33.48■■■□□ 2.95
SH3GL3-202ENST00000427482 FAM161AQ3B820 660 aa33.47■■■□□ 2.95
SH3GL3-202ENST00000427482 SIRT2Q8IXJ6 389 aa33.47■■■□□ 2.95
SH3GL3-202ENST00000427482 ZCRB1Q8TBF4 217 aaKnown RBP33.47■■■□□ 2.95
SH3GL3-202ENST00000427482 ATP10DQ9P241 1426 aa33.47■■■□□ 2.95
SH3GL3-202ENST00000427482 NFATC2IPQ8NCF5 419 aa33.46■■■□□ 2.95
SH3GL3-202ENST00000427482 CHPF2Q9P2E5 772 aa33.46■■■□□ 2.95
SH3GL3-202ENST00000427482 ZNF790Q6PG37 636 aa33.46■■■□□ 2.95
SH3GL3-202ENST00000427482 MEIS3Q99687 375 aa33.44■■■□□ 2.94
SH3GL3-202ENST00000427482 PHAXQ9H814 394 aaKnown RBP33.44■■■□□ 2.94
SH3GL3-202ENST00000427482 C8orf34Q49A92 452 aa33.44■■■□□ 2.94
SH3GL3-202ENST00000427482 BTG4Q9NY30 223 aa33.44■■■□□ 2.94
SH3GL3-202ENST00000427482 GCC1Q96CN9 775 aa33.43■■■□□ 2.94
SH3GL3-202ENST00000427482 SLC39A6Q13433 755 aa33.42■■■□□ 2.94
SH3GL3-202ENST00000427482 NUCB1Q02818 461 aa33.41■■■□□ 2.94
SH3GL3-202ENST00000427482 DBF4Q9UBU7 674 aaPredicted RBP33.41■■■□□ 2.94
SH3GL3-202ENST00000427482 PLCH1Q4KWH8 1693 aa33.4■■■□□ 2.94
SH3GL3-202ENST00000427482 ANKRD44Q8N8A2 993 aa33.39■■■□□ 2.94
SH3GL3-202ENST00000427482 RPAP2Q8IXW5 612 aaPredicted RBP33.39■■■□□ 2.94
SH3GL3-202ENST00000427482 PRAMEF22A3QJZ6 481 aa33.38■■■□□ 2.93
SH3GL3-202ENST00000427482 NKX1-1Q15270 411 aaPredicted RBP33.38■■■□□ 2.93
SH3GL3-202ENST00000427482 CABP4P57796 275 aa33.37■■■□□ 2.93
SH3GL3-202ENST00000427482 TOM1O60784 492 aa33.37■■■□□ 2.93
SH3GL3-202ENST00000427482 CEP85Q6P2H3 762 aa33.37■■■□□ 2.93
SH3GL3-202ENST00000427482 WNK3Q9BYP7 1800 aa33.37■■■□□ 2.93
SH3GL3-202ENST00000427482 GLI3P10071 1580 aa33.36■■■□□ 2.93
SH3GL3-202ENST00000427482 LAMB4A4D0S4 1761 aa33.36■■■□□ 2.93
SH3GL3-202ENST00000427482 PAPPAQ13219 1627 aa33.36■■■□□ 2.93
SH3GL3-202ENST00000427482 UBR2Q8IWV8 1755 aa33.35■■■□□ 2.93
SH3GL3-202ENST00000427482 ANXA1P04083 346 aa33.34■■■□□ 2.93
SH3GL3-202ENST00000427482 CHD1LQ86WJ1 897 aa33.34■■■□□ 2.93
SH3GL3-202ENST00000427482 TOGARAM1Q9Y4F4 1720 aa33.34■■■□□ 2.93
SH3GL3-202ENST00000427482 TTC5Q8N0Z6 440 aa33.33■■■□□ 2.93
SH3GL3-202ENST00000427482 ZNF496Q96IT1 587 aaPredicted RBP33.33■■■□□ 2.93
SH3GL3-202ENST00000427482 NRAPQ86VF7 1730 aa33.33■■■□□ 2.93
SH3GL3-202ENST00000427482 ERVV-2B6SEH9 535 aa33.32■■■□□ 2.93
SH3GL3-202ENST00000427482 DISP2A7MBM2 1401 aa33.32■■■□□ 2.93
SH3GL3-202ENST00000427482 GNAI3P08754 354 aa33.32■■■□□ 2.92
SH3GL3-202ENST00000427482 ADCY9O60503 1353 aa33.31■■■□□ 2.92
SH3GL3-202ENST00000427482 PROSER3Q2NL68 480 aa33.31■■■□□ 2.92
SH3GL3-202ENST00000427482 DCTPP1Q9H773 170 aa33.31■■■□□ 2.92
SH3GL3-202ENST00000427482 HYPKQ9NX55 129 aa33.31■■■□□ 2.92
SH3GL3-202ENST00000427482 USP35Q9P2H5 1018 aa33.31■■■□□ 2.92
SH3GL3-202ENST00000427482 GNAI2P04899 355 aa33.3■■■□□ 2.92
SH3GL3-202ENST00000427482 DNAAF4Q8WXU2 420 aa33.3■■■□□ 2.92
SH3GL3-202ENST00000427482 FMNL2Q96PY5 1086 aa33.3■■■□□ 2.92
SH3GL3-202ENST00000427482 LNPKQ9C0E8 428 aa33.3■■■□□ 2.92
SH3GL3-202ENST00000427482 DDX21Q9NR30 783 aaKnown RBP eCLIP33.3■■■□□ 2.92
SH3GL3-202ENST00000427482 PI4KAP2A4QPH2 592 aa33.29■■■□□ 2.92
SH3GL3-202ENST00000427482 PI4KAP1Q8N8J0 262 aa33.29■■■□□ 2.92
SH3GL3-202ENST00000427482 DDX54Q8TDD1 881 aaKnown RBP33.29■■■□□ 2.92
SH3GL3-202ENST00000427482 ANP32AP39687 249 aaKnown RBP33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms