RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 LOC102724428A0A0B4J2F2 783 aa13.76□□□□□ -0.21
COMMD1-202ENST00000427417 SIK1P57059 783 aa13.76□□□□□ -0.21
COMMD1-202ENST00000427417 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
COMMD1-202ENST00000427417 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
COMMD1-202ENST00000427417 PHF14O94880 888 aa13.75□□□□□ -0.21
COMMD1-202ENST00000427417 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
COMMD1-202ENST00000427417 ATG3Q9NT62 314 aa13.75□□□□□ -0.21
COMMD1-202ENST00000427417 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
COMMD1-202ENST00000427417 KDM6AO15550 1401 aaPredicted RBP13.74□□□□□ -0.21
COMMD1-202ENST00000427417 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
COMMD1-202ENST00000427417 CABP4P57796 275 aa13.74□□□□□ -0.21
COMMD1-202ENST00000427417 ITPK1Q13572 414 aa13.74□□□□□ -0.21
COMMD1-202ENST00000427417 NLGN2Q8NFZ4 835 aa13.74□□□□□ -0.21
COMMD1-202ENST00000427417 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
COMMD1-202ENST00000427417 SSFA2P28290 1259 aa13.72□□□□□ -0.21
COMMD1-202ENST00000427417 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
COMMD1-202ENST00000427417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.21
COMMD1-202ENST00000427417 HMOX1P09601 288 aa13.71□□□□□ -0.21
COMMD1-202ENST00000427417 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
COMMD1-202ENST00000427417 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
COMMD1-202ENST00000427417 GNPATO15228 680 aa13.7□□□□□ -0.22
COMMD1-202ENST00000427417 GPR162Q16538 588 aa13.7□□□□□ -0.22
COMMD1-202ENST00000427417 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
COMMD1-202ENST00000427417 CHD4Q14839 1912 aa13.69□□□□□ -0.22
COMMD1-202ENST00000427417 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
COMMD1-202ENST00000427417 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
COMMD1-202ENST00000427417 U2SURPO15042 1029 aaKnown RBP13.68□□□□□ -0.22
COMMD1-202ENST00000427417 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
COMMD1-202ENST00000427417 RTCBQ9Y3I0 505 aaKnown RBP13.67□□□□□ -0.22
COMMD1-202ENST00000427417 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
COMMD1-202ENST00000427417 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
COMMD1-202ENST00000427417 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 YBX3P16989 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
COMMD1-202ENST00000427417 ADRA2BP18089 450 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
COMMD1-202ENST00000427417 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
COMMD1-202ENST00000427417 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
COMMD1-202ENST00000427417 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
COMMD1-202ENST00000427417 VIRMAQ69YN4 1812 aaKnown RBP13.65□□□□□ -0.22
COMMD1-202ENST00000427417 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
COMMD1-202ENST00000427417 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
COMMD1-202ENST00000427417 ZNF784Q8NCA9 323 aaPredicted RBP13.65□□□□□ -0.22
COMMD1-202ENST00000427417 GAS2L2Q8NHY3 880 aa13.65□□□□□ -0.22
COMMD1-202ENST00000427417 CD2APQ9Y5K6 639 aa13.65□□□□□ -0.22
COMMD1-202ENST00000427417 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
COMMD1-202ENST00000427417 LGR6Q9HBX8 967 aa13.64□□□□□ -0.23
COMMD1-202ENST00000427417 MRC1P22897 1456 aa13.63□□□□□ -0.23
COMMD1-202ENST00000427417 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
COMMD1-202ENST00000427417 TJP1Q07157 1748 aa13.63□□□□□ -0.23
COMMD1-202ENST00000427417 C4AP0C0L4 1744 aa13.62□□□□□ -0.23
COMMD1-202ENST00000427417 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
COMMD1-202ENST00000427417 RFC4P35249 363 aa13.62□□□□□ -0.23
COMMD1-202ENST00000427417 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
COMMD1-202ENST00000427417 TEFQ10587 303 aa13.61□□□□□ -0.23
COMMD1-202ENST00000427417 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
COMMD1-202ENST00000427417 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
COMMD1-202ENST00000427417 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
COMMD1-202ENST00000427417 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
COMMD1-202ENST00000427417 MMP10P09238 476 aa13.6□□□□□ -0.23
COMMD1-202ENST00000427417 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
COMMD1-202ENST00000427417 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
COMMD1-202ENST00000427417 CRKLP46109 303 aaKnown RBP13.6□□□□□ -0.23
COMMD1-202ENST00000427417 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
COMMD1-202ENST00000427417 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
COMMD1-202ENST00000427417 VSIG10Q8N0Z9 540 aa13.6□□□□□ -0.23
COMMD1-202ENST00000427417 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
COMMD1-202ENST00000427417 FCHSD2O94868 740 aa13.59□□□□□ -0.23
COMMD1-202ENST00000427417 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
COMMD1-202ENST00000427417 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
COMMD1-202ENST00000427417 GYS1P13807 737 aa13.58□□□□□ -0.24
COMMD1-202ENST00000427417 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
COMMD1-202ENST00000427417 NEFMP07197 916 aa13.57□□□□□ -0.24
COMMD1-202ENST00000427417 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
COMMD1-202ENST00000427417 CCDC87Q9NVE4 849 aa13.57□□□□□ -0.24
COMMD1-202ENST00000427417 KCPQ6ZWJ8 1503 aa13.57□□□□□ -0.24
COMMD1-202ENST00000427417 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
COMMD1-202ENST00000427417 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
COMMD1-202ENST00000427417 STARD3NLO95772 234 aa13.56□□□□□ -0.24
COMMD1-202ENST00000427417 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
COMMD1-202ENST00000427417 INTS5Q6P9B9 1019 aaKnown RBP13.56□□□□□ -0.24
COMMD1-202ENST00000427417 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
COMMD1-202ENST00000427417 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
COMMD1-202ENST00000427417 PARP3Q9Y6F1 533 aa13.56□□□□□ -0.24
COMMD1-202ENST00000427417 KIF13BQ9NQT8 1826 aa13.55□□□□□ -0.24
COMMD1-202ENST00000427417 ZPR1O75312 459 aa13.55□□□□□ -0.24
COMMD1-202ENST00000427417 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
COMMD1-202ENST00000427417 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
COMMD1-202ENST00000427417 USP42Q9H9J4 1324 aaKnown RBP13.55□□□□□ -0.24
COMMD1-202ENST00000427417 CEMIPQ8WUJ3 1361 aa13.55□□□□□ -0.24
COMMD1-202ENST00000427417 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
COMMD1-202ENST00000427417 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
COMMD1-202ENST00000427417 TGFB2P61812 414 aa13.54□□□□□ -0.24
COMMD1-202ENST00000427417 FKBP8Q14318 412 aa13.54□□□□□ -0.24
COMMD1-202ENST00000427417 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
COMMD1-202ENST00000427417 SOS1Q07889 1333 aaPredicted RBP13.54□□□□□ -0.24
COMMD1-202ENST00000427417 C10orf71Q711Q0 1435 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms