RNA–Protein interactions for RNA: ENST00000426304.5

NHEJ1-204, Transcript of non-homologous end joining factor 1, human

TSL 3

Gene NHEJ1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NHEJ1-204	ENST00000426304	CARD11	Q9BXL7	1154 aa		11.11	□□□□□ -0.63
NHEJ1-204	ENST00000426304	POTED	Q86YR6	584 aa		11.1	□□□□□ -0.63
NHEJ1-204	ENST00000426304	DDX54	Q8TDD1	881 aa	Known RBP	11.1	□□□□□ -0.63
NHEJ1-204	ENST00000426304	USP47	Q96K76	1375 aa		11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	TESPA1	A2RU30	521 aa	Predicted RBP	11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	E2F4	Q16254	413 aa		11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	SIN3A	Q96ST3	1273 aa		11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	SLC12A5	Q9H2X9	1139 aa		11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	SLC24A3	Q9HC58	644 aa		11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	CCNL1	Q9UK58	526 aa	Predicted RBP	11.09	□□□□□ -0.63
NHEJ1-204	ENST00000426304	C5	P01031	1676 aa		11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	HOXC9	P31274	260 aa		11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PRIM1	P49642	420 aa	Known RBP	11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	FLAD1	Q8NFF5	587 aa		11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	ZCRB1	Q8TBF4	217 aa	Known RBP	11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	SYTL4	Q96C24	671 aa	Predicted RBP	11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	COG3	Q96JB2	828 aa		11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	MEGF6	O75095	1541 aa		11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	SMG6	Q86US8	1419 aa	Known RBP	11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	MAP3K19	Q56UN5	1328 aa		11.08	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PELP1	Q8IZL8	1130 aa	Known RBP	11.07	□□□□□ -0.64
NHEJ1-204	ENST00000426304	NLGN2	Q8NFZ4	835 aa		11.07	□□□□□ -0.64
NHEJ1-204	ENST00000426304	RGPD2	P0DJD1	1756 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	SEMA3E	O15041	775 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	AMPH	P49418	695 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	NEUROD1	Q13562	356 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	IFFO2	Q5TF58	517 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PCDHB8	Q9UN66	801 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PCDHB13	Q9Y5F0	798 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	CD2AP	Q9Y5K6	639 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	TAF1L	Q8IZX4	1826 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	NSD3	Q9BZ95	1437 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	CEP350	Q5VT06	3117 aa		11.06	□□□□□ -0.64
NHEJ1-204	ENST00000426304	KIF24	Q5T7B8	1368 aa		11.05	□□□□□ -0.64
NHEJ1-204	ENST00000426304	CACNB1	Q02641	598 aa	Predicted RBP	11.05	□□□□□ -0.64
NHEJ1-204	ENST00000426304	LTV1	Q96GA3	475 aa	Predicted RBP	11.05	□□□□□ -0.64
NHEJ1-204	ENST00000426304	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.05	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PCDH11X	Q9BZA7	1347 aa		11.05	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PCDH11Y	Q9BZA8	1340 aa		11.05	□□□□□ -0.64
NHEJ1-204	ENST00000426304	ADCY9	O60503	1353 aa		11.04	□□□□□ -0.64
NHEJ1-204	ENST00000426304	ATP10D	Q9P241	1426 aa		11.04	□□□□□ -0.64
NHEJ1-204	ENST00000426304	YBX3	P16989	372 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PSEN1	P49768	467 aa		11.04	□□□□□ -0.64
NHEJ1-204	ENST00000426304	COL23A1	Q86Y22	540 aa	Predicted RBP	11.04	□□□□□ -0.64
NHEJ1-204	ENST00000426304	RAPGEF4	Q8WZA2	1011 aa		11.04	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PPP1R37	O75864	691 aa		11.03	□□□□□ -0.64
NHEJ1-204	ENST00000426304	C4B	P0C0L5	1744 aa		11.03	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PALLD	Q8WX93	1383 aa		11.03	□□□□□ -0.64
NHEJ1-204	ENST00000426304	TONSL	Q96HA7	1378 aa		11.03	□□□□□ -0.64
NHEJ1-204	ENST00000426304	PKD1L3	Q7Z443	1732 aa		11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	TAT	P17735	454 aa	Predicted RBP	11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	KCNQ4	P56696	695 aa		11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	SMARCC1	Q92922	1105 aa	Predicted RBP	11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	TESK2	Q96S53	571 aa		11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	KIF20B	Q96Q89	1820 aa		11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	INSR	P06213	1382 aa		11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	FLT4	P35916	1363 aa		11.02	□□□□□ -0.65
NHEJ1-204	ENST00000426304	NBPF6	Q5VWK0	638 aa		11.01	□□□□□ -0.65
NHEJ1-204	ENST00000426304	NBPF4	Q96M43	638 aa		11.01	□□□□□ -0.65
NHEJ1-204	ENST00000426304	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.01	□□□□□ -0.65
NHEJ1-204	ENST00000426304	UBR3	Q6ZT12	1888 aa		11.01	□□□□□ -0.65
NHEJ1-204	ENST00000426304	CIC	Q96RK0	1608 aa	Predicted RBP	11.01	□□□□□ -0.65
NHEJ1-204	ENST00000426304	ITGB4	P16144	1822 aa		11	□□□□□ -0.65
NHEJ1-204	ENST00000426304	ZMYND10	O75800	440 aa		11	□□□□□ -0.65
NHEJ1-204	ENST00000426304	TOGARAM1	Q9Y4F4	1720 aa		11	□□□□□ -0.65
NHEJ1-204	ENST00000426304	NCAPD2	Q15021	1401 aa		11	□□□□□ -0.65
NHEJ1-204	ENST00000426304	PITPNM1	O00562	1244 aa		10.99	□□□□□ -0.65
NHEJ1-204	ENST00000426304	HSPA6	P17066	643 aa		10.99	□□□□□ -0.65
NHEJ1-204	ENST00000426304	MSL1	Q68DK7	614 aa		10.99	□□□□□ -0.65
NHEJ1-204	ENST00000426304	ZNF579	Q8NAF0	562 aa	Known RBP	10.99	□□□□□ -0.65
NHEJ1-204	ENST00000426304	AK7	Q96M32	723 aa		10.99	□□□□□ -0.65
NHEJ1-204	ENST00000426304	PLEKHG2	Q9H7P9	1386 aa		10.99	□□□□□ -0.65
NHEJ1-204	ENST00000426304	ST20-MTHFS	A0A0A6YYL1	179 aa		10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	FYB1	O15117	783 aa		10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	SSFA2	P28290	1259 aa		10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	RRS1	Q15050	365 aa	Known RBP	10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	FBXO22	Q8NEZ5	403 aa		10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	ANKRD26	Q9UPS8	1709 aa		10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	MAP2	P11137	1827 aa	Known RBP	10.98	□□□□□ -0.65
NHEJ1-204	ENST00000426304	IGSF1	Q8N6C5	1336 aa		10.97	□□□□□ -0.65
NHEJ1-204	ENST00000426304	KIF13B	Q9NQT8	1826 aa		10.96	□□□□□ -0.65
NHEJ1-204	ENST00000426304	TMF1	P82094	1093 aa		10.96	□□□□□ -0.65
NHEJ1-204	ENST00000426304	CDCA8	Q53HL2	280 aa		10.96	□□□□□ -0.65
NHEJ1-204	ENST00000426304	SMYD5	Q6GMV2	418 aa		10.96	□□□□□ -0.65
NHEJ1-204	ENST00000426304	MPRIP	Q6WCQ1	1025 aa		10.96	□□□□□ -0.65
NHEJ1-204	ENST00000426304	USHBP1	Q8N6Y0	703 aa		10.96	□□□□□ -0.65
NHEJ1-204	ENST00000426304	ZNF831	Q5JPB2	1677 aa		10.95	□□□□□ -0.66
NHEJ1-204	ENST00000426304	CYP27B1	O15528	508 aa		10.95	□□□□□ -0.66
NHEJ1-204	ENST00000426304	FBLN1	P23142	703 aa		10.95	□□□□□ -0.66
NHEJ1-204	ENST00000426304	GGNBP2	Q9H3C7	697 aa		10.95	□□□□□ -0.66
NHEJ1-204	ENST00000426304	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.95	□□□□□ -0.66
NHEJ1-204	ENST00000426304	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.94	□□□□□ -0.66
NHEJ1-204	ENST00000426304	HSP90AB2P	Q58FF8	381 aa		10.94	□□□□□ -0.66
NHEJ1-204	ENST00000426304	EFCAB3	Q8N7B9	438 aa		10.94	□□□□□ -0.66
NHEJ1-204	ENST00000426304	SPG7	Q9UQ90	795 aa		10.94	□□□□□ -0.66
NHEJ1-204	ENST00000426304	LOC102724428	A0A0B4J2F2	783 aa		10.93	□□□□□ -0.66
NHEJ1-204	ENST00000426304	SIK1	P57059	783 aa		10.93	□□□□□ -0.66
NHEJ1-204	ENST00000426304	PIGB	Q92521	554 aa		10.93	□□□□□ -0.66
NHEJ1-204	ENST00000426304	PHF14	O94880	888 aa		10.92	□□□□□ -0.66
NHEJ1-204	ENST00000426304	TMOD3	Q9NYL9	352 aa		10.92	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms