RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ARXQ96QS3 562 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 ERBB3P21860 1342 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 PARD3Q8TEW0 1356 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 MYOM1P52179 1685 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 RREB1Q92766 1687 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-207ENST00000426253 RABGEF1Q9UJ41 708 aa9.18□□□□□ -0.94
NIF3L1-207ENST00000426253 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-207ENST00000426253 DDX11L8A8MPP1 907 aa9.17□□□□□ -0.94
NIF3L1-207ENST00000426253 SMAPO00193 183 aa9.17□□□□□ -0.94
NIF3L1-207ENST00000426253 PSEN2P49810 448 aa9.17□□□□□ -0.94
NIF3L1-207ENST00000426253 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-207ENST00000426253 PLCH1Q4KWH8 1693 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 NAIPQ13075 1403 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 GJA5P36382 358 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 PBX2P40425 430 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 SYT17Q9BSW7 474 aa9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-207ENST00000426253 NPHP3Q7Z494 1330 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 SHANK3Q9BYB0 1731 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 SPTLC1O15269 473 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 GPR162Q16538 588 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 POTEEQ6S8J3 1075 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 TMEM131LA2VDJ0 1609 aa9.15□□□□□ -0.94
NIF3L1-207ENST00000426253 DLC1Q96QB1 1528 aa9.15□□□□□ -0.95
NIF3L1-207ENST00000426253 NWD2Q9ULI1 1742 aa9.14□□□□□ -0.95
NIF3L1-207ENST00000426253 ST18O60284 1047 aa9.14□□□□□ -0.95
NIF3L1-207ENST00000426253 ZBTB7AO95365 584 aa9.14□□□□□ -0.95
NIF3L1-207ENST00000426253 HFM1A2PYH4 1435 aa9.14□□□□□ -0.95
NIF3L1-207ENST00000426253 IQGAP3Q86VI3 1631 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 A6NJR5 290 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 ZNF687Q8N1G0 1237 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 LIMD1Q9UGP4 676 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 PXDNQ92626 1479 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 E9PCH4 1651 aa9.13□□□□□ -0.95
NIF3L1-207ENST00000426253 MCM6Q14566 821 aa9.12□□□□□ -0.95
NIF3L1-207ENST00000426253 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
NIF3L1-207ENST00000426253 ESCO1Q5FWF5 840 aa9.12□□□□□ -0.95
NIF3L1-207ENST00000426253 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-207ENST00000426253 FOXO3O43524 673 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 RFC5P40937 340 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 GCGRP47871 477 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 EMP3P54852 163 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 FAM196AQ6ZSG2 479 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 MPHOSPH9Q99550 1183 aa9.11□□□□□ -0.95
NIF3L1-207ENST00000426253 CASZ1Q86V15 1759 aa9.1□□□□□ -0.95
NIF3L1-207ENST00000426253 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
NIF3L1-207ENST00000426253 KDM4AO75164 1064 aa9.1□□□□□ -0.95
NIF3L1-207ENST00000426253 USP46P62068 366 aa9.1□□□□□ -0.95
NIF3L1-207ENST00000426253 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
NIF3L1-207ENST00000426253 ACIN1Q9UKV3 1341 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-207ENST00000426253 SPDYE5A6NIY4 337 aa9.09□□□□□ -0.95
NIF3L1-207ENST00000426253 SWT1Q5T5J6 900 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-207ENST00000426253 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
NIF3L1-207ENST00000426253 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
NIF3L1-207ENST00000426253 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-207ENST00000426253 LILRB3O75022 631 aa9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 SLC10A3P09131 477 aa9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 CABLES1Q8TDN4 633 aa9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 PDGFDQ9GZP0 370 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 METP08581 1390 aa9.08□□□□□ -0.96
NIF3L1-207ENST00000426253 ATP10DQ9P241 1426 aa9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 TK2O00142 265 aa9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 NDUFV2P19404 249 aa9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 APLP1P51693 650 aa9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 PRPF38BQ5VTL8 546 aaKnown RBP9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 ZNF526Q8TF50 670 aaPredicted RBP9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 NRAPQ86VF7 1730 aa9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 THSD7AQ9UPZ6 1657 aa9.07□□□□□ -0.96
NIF3L1-207ENST00000426253 NRXN3Q9Y4C0 1643 aa9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 FAM205CA6NFA0 338 aa9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 BHMG1C9JSJ3 638 aaPredicted RBP9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 SLF2Q8IX21 1173 aa9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 MARVELD3Q96A59 401 aa9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 BTG4Q9NY30 223 aa9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
NIF3L1-207ENST00000426253 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 RPGRIP1LQ68CZ1 1315 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 TRAK2O60296 914 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 RGL3Q3MIN7 710 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 HOMEZQ8IX15 550 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 CLUAP1Q96AJ1 413 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 NEXMIFQ5QGS0 1516 aa9.05□□□□□ -0.96
NIF3L1-207ENST00000426253 HOXA2O43364 376 aa9.04□□□□□ -0.96
NIF3L1-207ENST00000426253 RAD21O60216 631 aa9.04□□□□□ -0.96
NIF3L1-207ENST00000426253 QPCTQ16769 361 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms