RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 RGS17Q9UGC6 210 aaPredicted RBP7.78□□□□□ -1.16
HERPUD2-204ENST00000426180 AFF2P51816 1311 aa7.78□□□□□ -1.16
HERPUD2-204ENST00000426180 BCL9LQ86UU0 1499 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 AATKQ6ZMQ8 1374 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 ZNF454Q8N9F8 522 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 BTG4Q9NY30 223 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 VPS9D1Q9Y2B5 631 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 PEAK1Q9H792 1746 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 SLIT2O94813 1529 aa7.77□□□□□ -1.17
HERPUD2-204ENST00000426180 CAMTA1Q9Y6Y1 1673 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 ANKRD26Q9UPS8 1709 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 PPM1GO15355 546 aaPredicted RBP7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 HOXC9P31274 260 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 HSP90AB2PQ58FF8 381 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 FNBP4Q8N3X1 1017 aaPredicted RBP7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 CRISPLD2Q9H0B8 497 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 COL18A1P39060 1754 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
HERPUD2-204ENST00000426180 COL14A1Q05707 1796 aaKnown RBP7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 PDE4AP27815 886 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 PPP2R1AP30153 589 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 AMPHP49418 695 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 MTHFSP49914 203 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 PPP1R15BQ5SWA1 713 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 LARP1Q6PKG0 1096 aaKnown RBP7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 UNC5CLQ8IV45 518 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 IP6K1Q92551 441 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 LTV1Q96GA3 475 aaPredicted RBP7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 PRKRIP1Q9H875 184 aaPredicted RBP7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 USP21Q9UK80 565 aa7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 SMG6Q86US8 1419 aaKnown RBP7.75□□□□□ -1.17
HERPUD2-204ENST00000426180 PLCH1Q4KWH8 1693 aa7.74□□□□□ -1.17
HERPUD2-204ENST00000426180 POTEAQ6S8J7 498 aa7.74□□□□□ -1.17
HERPUD2-204ENST00000426180 ANKRD24Q8TF21 1146 aa7.74□□□□□ -1.17
HERPUD2-204ENST00000426180 BCL2L12Q9HB09 334 aa7.74□□□□□ -1.17
HERPUD2-204ENST00000426180 STRN4Q9NRL3 753 aa7.74□□□□□ -1.17
HERPUD2-204ENST00000426180 COL5A2P05997 1499 aaPredicted RBP7.74□□□□□ -1.17
HERPUD2-204ENST00000426180 RTL1A6NKG5 1358 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 FLT4P35916 1363 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 NRAPQ86VF7 1730 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 ATRNO75882 1429 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 PTPN5P54829 565 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 RALBP1Q15311 655 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 QTRT2Q9H974 415 aaKnown RBP7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 LTN1O94822 1766 aa7.73□□□□□ -1.17
HERPUD2-204ENST00000426180 INSRP06213 1382 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 PTPREP23469 700 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 EVA1CP58658 441 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 EIF4A2Q14240 407 aaKnown RBP7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 VPS72Q15906 364 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 CCDC184Q52MB2 194 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 USHBP1Q8N6Y0 703 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 SLC4A5Q9BY07 1137 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 COL3A1P02461 1466 aaPredicted RBP7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 WDR17Q8IZU2 1322 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 ABCC6O95255 1503 aa7.72□□□□□ -1.17
HERPUD2-204ENST00000426180 BLMP54132 1417 aaPredicted RBP7.71□□□□□ -1.17
HERPUD2-204ENST00000426180 CDK12Q9NYV4 1490 aaPredicted RBP7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 IL13P35225 146 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 FOSBP53539 338 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 DIEXFQ68CQ4 756 aaKnown RBP7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 ZNF772Q68DY9 489 aaPredicted RBP7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 NBPF4Q96M43 638 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 NLRP2Q9NX02 1062 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 USP35Q9P2H5 1018 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 SPATA31A5Q5VU36 1347 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 SPATA31A7Q8IWB4 1347 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 MYBBP1AQ9BQG0 1328 aaKnown RBP7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 RGPD5Q99666 1765 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 KIF24Q5T7B8 1368 aa7.71□□□□□ -1.18
HERPUD2-204ENST00000426180 NWD2Q9ULI1 1742 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 BHMG1C9JSJ3 638 aaPredicted RBP7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 ANP32CO43423 234 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 EVI5O60447 810 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 TOM1L2Q6ZVM7 507 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 EYA1Q99502 592 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 TRPC5Q9UL62 973 aaPredicted RBP7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 CCDC9Q9Y3X0 531 aaKnown RBP7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 MAP2P11137 1827 aaKnown RBP7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 GLI3P10071 1580 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 SPATA31A1Q5TZJ5 1347 aa7.7□□□□□ -1.18
HERPUD2-204ENST00000426180 CRB1P82279 1406 aa7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 GOLGA8CPA6NN73 597 aa7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 FAM98CQ17RN3 349 aaKnown RBP7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 AEBP1Q8IUX7 1158 aa7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 LARP6Q9BRS8 491 aaKnown RBP7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 CARD10Q9BWT7 1032 aa7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.69□□□□□ -1.18
HERPUD2-204ENST00000426180 DIAPH1O60610 1272 aaKnown RBP7.68□□□□□ -1.18
HERPUD2-204ENST00000426180 MAP3K9P80192 1104 aa7.68□□□□□ -1.18
HERPUD2-204ENST00000426180 TCP11L2Q8N4U5 519 aa7.68□□□□□ -1.18
HERPUD2-204ENST00000426180 ZDHHC16Q969W1 377 aa7.68□□□□□ -1.18
HERPUD2-204ENST00000426180 ZBED2Q9BTP6 218 aa7.68□□□□□ -1.18
HERPUD2-204ENST00000426180 FAM208AQ9UK61 1670 aaKnown RBP7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 GTPBP6O43824 516 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms