RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 COL5A3P25940 1745 aaPredicted RBP18.3■□□□□ 0.52
SNX3-204ENST00000426155 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
SNX3-204ENST00000426155 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
SNX3-204ENST00000426155 MRC1P22897 1456 aa18.3■□□□□ 0.52
SNX3-204ENST00000426155 AKAP4Q5JQC9 854 aa18.29■□□□□ 0.52
SNX3-204ENST00000426155 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
SNX3-204ENST00000426155 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
SNX3-204ENST00000426155 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
SNX3-204ENST00000426155 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
SNX3-204ENST00000426155 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
SNX3-204ENST00000426155 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
SNX3-204ENST00000426155 TJP1Q07157 1748 aa18.28■□□□□ 0.52
SNX3-204ENST00000426155 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
SNX3-204ENST00000426155 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
SNX3-204ENST00000426155 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
SNX3-204ENST00000426155 CABP4P57796 275 aa18.27■□□□□ 0.52
SNX3-204ENST00000426155 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNX3-204ENST00000426155 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 DLG5Q8TDM6 1919 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 SIK1P57059 783 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 PHACTR3Q96KR7 559 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
SNX3-204ENST00000426155 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
SNX3-204ENST00000426155 ITPK1Q13572 414 aa18.25■□□□□ 0.51
SNX3-204ENST00000426155 NFATC2IPQ8NCF5 419 aa18.25■□□□□ 0.51
SNX3-204ENST00000426155 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
SNX3-204ENST00000426155 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
SNX3-204ENST00000426155 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
SNX3-204ENST00000426155 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
SNX3-204ENST00000426155 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
SNX3-204ENST00000426155 SLC4A9Q96Q91 983 aa18.24■□□□□ 0.51
SNX3-204ENST00000426155 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
SNX3-204ENST00000426155 UBR2Q8IWV8 1755 aa18.24■□□□□ 0.51
SNX3-204ENST00000426155 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
SNX3-204ENST00000426155 RALBP1Q15311 655 aa18.23■□□□□ 0.51
SNX3-204ENST00000426155 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
SNX3-204ENST00000426155 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
SNX3-204ENST00000426155 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
SNX3-204ENST00000426155 PTGER2P43116 358 aa18.22■□□□□ 0.51
SNX3-204ENST00000426155 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
SNX3-204ENST00000426155 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
SNX3-204ENST00000426155 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
SNX3-204ENST00000426155 KCPQ6ZWJ8 1503 aa18.21■□□□□ 0.51
SNX3-204ENST00000426155 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
SNX3-204ENST00000426155 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
SNX3-204ENST00000426155 AK7Q96M32 723 aa18.2■□□□□ 0.5
SNX3-204ENST00000426155 C4AP0C0L4 1744 aa18.2■□□□□ 0.5
SNX3-204ENST00000426155 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
SNX3-204ENST00000426155 PHF14O94880 888 aa18.19■□□□□ 0.5
SNX3-204ENST00000426155 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
SNX3-204ENST00000426155 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
SNX3-204ENST00000426155 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
SNX3-204ENST00000426155 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
SNX3-204ENST00000426155 FCHSD2O94868 740 aa18.18■□□□□ 0.5
SNX3-204ENST00000426155 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
SNX3-204ENST00000426155 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
SNX3-204ENST00000426155 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
SNX3-204ENST00000426155 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
SNX3-204ENST00000426155 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
SNX3-204ENST00000426155 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
SNX3-204ENST00000426155 GNPATO15228 680 aa18.15■□□□□ 0.5
SNX3-204ENST00000426155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.49
SNX3-204ENST00000426155 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
SNX3-204ENST00000426155 MCM10Q7L590 875 aa18.14■□□□□ 0.49
SNX3-204ENST00000426155 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
SNX3-204ENST00000426155 TEFQ10587 303 aa18.13■□□□□ 0.49
SNX3-204ENST00000426155 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
SNX3-204ENST00000426155 DNAJC10Q8IXB1 793 aa18.12■□□□□ 0.49
SNX3-204ENST00000426155 SSFA2P28290 1259 aa18.11■□□□□ 0.49
SNX3-204ENST00000426155 ARXQ96QS3 562 aa18.11■□□□□ 0.49
SNX3-204ENST00000426155 FHDC1Q9C0D6 1143 aaPredicted RBP18.11■□□□□ 0.49
SNX3-204ENST00000426155 CNTNAP4Q9C0A0 1308 aa18.11■□□□□ 0.49
SNX3-204ENST00000426155 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
SNX3-204ENST00000426155 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
SNX3-204ENST00000426155 KCNQ3O43525 872 aa18.09■□□□□ 0.49
SNX3-204ENST00000426155 CRKLP46109 303 aaKnown RBP18.09■□□□□ 0.49
SNX3-204ENST00000426155 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
SNX3-204ENST00000426155 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
SNX3-204ENST00000426155 POLD1P28340 1107 aa18.08■□□□□ 0.48
SNX3-204ENST00000426155 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.48
SNX3-204ENST00000426155 TTC5Q8N0Z6 440 aa18.08■□□□□ 0.48
SNX3-204ENST00000426155 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
SNX3-204ENST00000426155 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.48
SNX3-204ENST00000426155 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
SNX3-204ENST00000426155 RTCBQ9Y3I0 505 aaKnown RBP18.08■□□□□ 0.48
SNX3-204ENST00000426155 NEFMP07197 916 aa18.07■□□□□ 0.48
SNX3-204ENST00000426155 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
SNX3-204ENST00000426155 RC3H1Q5TC82 1133 aaKnown RBP18.07■□□□□ 0.48
SNX3-204ENST00000426155 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
SNX3-204ENST00000426155 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
SNX3-204ENST00000426155 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
SNX3-204ENST00000426155 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
SNX3-204ENST00000426155 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
SNX3-204ENST00000426155 LAMB4A4D0S4 1761 aa18.05■□□□□ 0.48
SNX3-204ENST00000426155 RPS6KA4O75676 772 aa18.05■□□□□ 0.48
SNX3-204ENST00000426155 CYP19A1P11511 503 aaPredicted RBP18.05■□□□□ 0.48
SNX3-204ENST00000426155 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
SNX3-204ENST00000426155 SYT17Q9BSW7 474 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms