RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
CDK3-201ENST00000425876 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
CDK3-201ENST00000425876 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
CDK3-201ENST00000425876 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
CDK3-201ENST00000425876 KDM3BQ7LBC6 1761 aa18.31■□□□□ 0.52
CDK3-201ENST00000425876 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
CDK3-201ENST00000425876 NUTM2BA6NNL0 878 aaPredicted RBP18.3■□□□□ 0.52
CDK3-201ENST00000425876 NUTM2EB1AL46 878 aaPredicted RBP18.3■□□□□ 0.52
CDK3-201ENST00000425876 NUTM2AQ8IVF1 878 aaPredicted RBP18.3■□□□□ 0.52
CDK3-201ENST00000425876 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CDK3-201ENST00000425876 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
CDK3-201ENST00000425876 IGHDP01880 384 aa18.3■□□□□ 0.52
CDK3-201ENST00000425876 PHKG2P15735 406 aa18.3■□□□□ 0.52
CDK3-201ENST00000425876 EIF4A1P60842 406 aaKnown RBP18.3■□□□□ 0.52
CDK3-201ENST00000425876 STK31Q9BXU1 1019 aa18.3■□□□□ 0.52
CDK3-201ENST00000425876 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
CDK3-201ENST00000425876 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
CDK3-201ENST00000425876 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
CDK3-201ENST00000425876 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
CDK3-201ENST00000425876 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
CDK3-201ENST00000425876 ZBTB7BO15156 539 aaPredicted RBP18.28■□□□□ 0.52
CDK3-201ENST00000425876 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
CDK3-201ENST00000425876 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
CDK3-201ENST00000425876 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
CDK3-201ENST00000425876 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
CDK3-201ENST00000425876 RGS12O14924 1447 aa18.27■□□□□ 0.52
CDK3-201ENST00000425876 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.51
CDK3-201ENST00000425876 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
CDK3-201ENST00000425876 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
CDK3-201ENST00000425876 KDM6AO15550 1401 aaPredicted RBP18.26■□□□□ 0.51
CDK3-201ENST00000425876 SCN11AQ9UI33 1791 aa18.26■□□□□ 0.51
CDK3-201ENST00000425876 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
CDK3-201ENST00000425876 COL14A1Q05707 1796 aaKnown RBP18.25■□□□□ 0.51
CDK3-201ENST00000425876 CYP27B1O15528 508 aa18.25■□□□□ 0.51
CDK3-201ENST00000425876 EVA1CP58658 441 aa18.25■□□□□ 0.51
CDK3-201ENST00000425876 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
CDK3-201ENST00000425876 MRC1P22897 1456 aa18.24■□□□□ 0.51
CDK3-201ENST00000425876 MEX3CQ5U5Q3 659 aaKnown RBP18.24■□□□□ 0.51
CDK3-201ENST00000425876 IL2RBP14784 551 aa18.23■□□□□ 0.51
CDK3-201ENST00000425876 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
CDK3-201ENST00000425876 ZCRB1Q8TBF4 217 aaKnown RBP18.23■□□□□ 0.51
CDK3-201ENST00000425876 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
CDK3-201ENST00000425876 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
CDK3-201ENST00000425876 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
CDK3-201ENST00000425876 RGS17Q9UGC6 210 aaPredicted RBP18.22■□□□□ 0.51
CDK3-201ENST00000425876 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
CDK3-201ENST00000425876 KCNQ3O43525 872 aa18.21■□□□□ 0.51
CDK3-201ENST00000425876 ADAMTS2O95450 1211 aa18.21■□□□□ 0.51
CDK3-201ENST00000425876 G2E3Q7L622 706 aa18.21■□□□□ 0.51
CDK3-201ENST00000425876 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
CDK3-201ENST00000425876 FLIIQ13045 1269 aa18.21■□□□□ 0.51
CDK3-201ENST00000425876 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
CDK3-201ENST00000425876 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
CDK3-201ENST00000425876 CCT4P50991 539 aaKnown RBP18.2■□□□□ 0.5
CDK3-201ENST00000425876 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
CDK3-201ENST00000425876 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
CDK3-201ENST00000425876 C8orf37Q96NL8 207 aa18.19■□□□□ 0.5
CDK3-201ENST00000425876 PXDNLA1KZ92 1463 aa18.18■□□□□ 0.5
CDK3-201ENST00000425876 SMC5Q8IY18 1101 aa18.17■□□□□ 0.5
CDK3-201ENST00000425876 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
CDK3-201ENST00000425876 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
CDK3-201ENST00000425876 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
CDK3-201ENST00000425876 AFF2P51816 1311 aa18.16■□□□□ 0.5
CDK3-201ENST00000425876 NECTIN2Q92692 538 aa18.16■□□□□ 0.5
CDK3-201ENST00000425876 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
CDK3-201ENST00000425876 EIF2S2P20042 333 aaKnown RBP18.15■□□□□ 0.5
CDK3-201ENST00000425876 CABP4P57796 275 aa18.15■□□□□ 0.5
CDK3-201ENST00000425876 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
CDK3-201ENST00000425876 DISP2A7MBM2 1401 aa18.14■□□□□ 0.5
CDK3-201ENST00000425876 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
CDK3-201ENST00000425876 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
CDK3-201ENST00000425876 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 F6X3S4 739 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 N4BP2Q86UW6 1770 aaPredicted RBP18.13■□□□□ 0.49
CDK3-201ENST00000425876 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 PDE4AP27815 886 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 RPAP2Q8IXW5 612 aaPredicted RBP18.13■□□□□ 0.49
CDK3-201ENST00000425876 TTC5Q8N0Z6 440 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 GCC1Q96CN9 775 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 BACH2Q9BYV9 841 aa18.13■□□□□ 0.49
CDK3-201ENST00000425876 RGS3P49796 1198 aa18.12■□□□□ 0.49
CDK3-201ENST00000425876 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
CDK3-201ENST00000425876 SLC4A10Q6U841 1118 aa18.12■□□□□ 0.49
CDK3-201ENST00000425876 PHAXQ9H814 394 aaKnown RBP18.12■□□□□ 0.49
CDK3-201ENST00000425876 HYPKQ9NX55 129 aa18.12■□□□□ 0.49
CDK3-201ENST00000425876 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
CDK3-201ENST00000425876 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
CDK3-201ENST00000425876 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
CDK3-201ENST00000425876 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
CDK3-201ENST00000425876 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
CDK3-201ENST00000425876 MEIS3Q99687 375 aa18.1■□□□□ 0.49
CDK3-201ENST00000425876 CDCA7Q9BWT1 371 aaPredicted RBP18.1■□□□□ 0.49
CDK3-201ENST00000425876 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
CDK3-201ENST00000425876 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDK3-201ENST00000425876 ATP10DQ9P241 1426 aa18.1■□□□□ 0.49
CDK3-201ENST00000425876 GNAI3P08754 354 aa18.09■□□□□ 0.49
CDK3-201ENST00000425876 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
CDK3-201ENST00000425876 SLIT2O94813 1529 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms