RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 C8orf58Q8NAV2 365 aa20.4■□□□□ 0.86
SCRN1-205ENST00000425819 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
SCRN1-205ENST00000425819 MRC1P22897 1456 aa20.38■□□□□ 0.85
SCRN1-205ENST00000425819 ZNF772Q68DY9 489 aaPredicted RBP20.38■□□□□ 0.85
SCRN1-205ENST00000425819 MARCH10Q8NA82 808 aaPredicted RBP20.38■□□□□ 0.85
SCRN1-205ENST00000425819 VIRMAQ69YN4 1812 aaKnown RBP20.38■□□□□ 0.85
SCRN1-205ENST00000425819 ERVV-2B6SEH9 535 aa20.38■□□□□ 0.85
SCRN1-205ENST00000425819 KCNQ3O43525 872 aa20.38■□□□□ 0.85
SCRN1-205ENST00000425819 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
SCRN1-205ENST00000425819 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
SCRN1-205ENST00000425819 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
SCRN1-205ENST00000425819 VAMP4O75379 141 aa20.35■□□□□ 0.85
SCRN1-205ENST00000425819 RARSP54136 660 aaKnown RBP20.35■□□□□ 0.85
SCRN1-205ENST00000425819 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
SCRN1-205ENST00000425819 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
SCRN1-205ENST00000425819 ONECUT3O60422 494 aaPredicted RBP20.34■□□□□ 0.85
SCRN1-205ENST00000425819 BCAR3O75815 825 aa20.34■□□□□ 0.85
SCRN1-205ENST00000425819 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
SCRN1-205ENST00000425819 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
SCRN1-205ENST00000425819 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
SCRN1-205ENST00000425819 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.85
SCRN1-205ENST00000425819 TMOD3Q9NYL9 352 aa20.33■□□□□ 0.84
SCRN1-205ENST00000425819 KDM3BQ7LBC6 1761 aa20.32■□□□□ 0.84
SCRN1-205ENST00000425819 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
SCRN1-205ENST00000425819 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
SCRN1-205ENST00000425819 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
SCRN1-205ENST00000425819 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
SCRN1-205ENST00000425819 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
SCRN1-205ENST00000425819 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
SCRN1-205ENST00000425819 PLIN1O60240 522 aa20.3■□□□□ 0.84
SCRN1-205ENST00000425819 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
SCRN1-205ENST00000425819 TTC5Q8N0Z6 440 aa20.3■□□□□ 0.84
SCRN1-205ENST00000425819 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
SCRN1-205ENST00000425819 SMC4Q9NTJ3 1288 aa20.3■□□□□ 0.84
SCRN1-205ENST00000425819 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
SCRN1-205ENST00000425819 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
SCRN1-205ENST00000425819 PIGBQ92521 554 aa20.29■□□□□ 0.84
SCRN1-205ENST00000425819 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
SCRN1-205ENST00000425819 RGS17Q9UGC6 210 aaPredicted RBP20.29■□□□□ 0.84
SCRN1-205ENST00000425819 NEFLP07196 543 aa20.28■□□□□ 0.84
SCRN1-205ENST00000425819 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
SCRN1-205ENST00000425819 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
SCRN1-205ENST00000425819 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
SCRN1-205ENST00000425819 BCL9O00512 1426 aa20.27■□□□□ 0.83
SCRN1-205ENST00000425819 DOT1LQ8TEK3 1739 aa20.27■□□□□ 0.83
SCRN1-205ENST00000425819 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
SCRN1-205ENST00000425819 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
SCRN1-205ENST00000425819 RXRBP28702 533 aa20.25■□□□□ 0.83
SCRN1-205ENST00000425819 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.25■□□□□ 0.83
SCRN1-205ENST00000425819 ASAP1Q9ULH1 1129 aa20.25■□□□□ 0.83
SCRN1-205ENST00000425819 SOS1Q07889 1333 aaPredicted RBP20.25■□□□□ 0.83
SCRN1-205ENST00000425819 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
SCRN1-205ENST00000425819 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
SCRN1-205ENST00000425819 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
SCRN1-205ENST00000425819 CANXP27824 592 aaKnown RBP20.25■□□□□ 0.83
SCRN1-205ENST00000425819 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
SCRN1-205ENST00000425819 GTF3C3Q9Y5Q9 886 aa20.25■□□□□ 0.83
SCRN1-205ENST00000425819 HOXB7P09629 217 aa20.24■□□□□ 0.83
SCRN1-205ENST00000425819 EIF2S2P20042 333 aaKnown RBP20.24■□□□□ 0.83
SCRN1-205ENST00000425819 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
SCRN1-205ENST00000425819 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
SCRN1-205ENST00000425819 ILDR1Q86SU0 546 aaPredicted RBP20.24■□□□□ 0.83
SCRN1-205ENST00000425819 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
SCRN1-205ENST00000425819 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
SCRN1-205ENST00000425819 ITGB4P16144 1822 aa20.24■□□□□ 0.83
SCRN1-205ENST00000425819 KCNQ2O43526 872 aa20.23■□□□□ 0.83
SCRN1-205ENST00000425819 PTCD1O75127 700 aaKnown RBP20.23■□□□□ 0.83
SCRN1-205ENST00000425819 FKBP8Q14318 412 aa20.23■□□□□ 0.83
SCRN1-205ENST00000425819 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
SCRN1-205ENST00000425819 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
SCRN1-205ENST00000425819 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
SCRN1-205ENST00000425819 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
SCRN1-205ENST00000425819 KCPQ6ZWJ8 1503 aa20.21■□□□□ 0.83
SCRN1-205ENST00000425819 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
SCRN1-205ENST00000425819 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
SCRN1-205ENST00000425819 STK31Q9BXU1 1019 aa20.21■□□□□ 0.83
SCRN1-205ENST00000425819 KIF16BQ96L93 1317 aa20.2■□□□□ 0.82
SCRN1-205ENST00000425819 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
SCRN1-205ENST00000425819 BRPF1P55201 1214 aaPredicted RBP20.2■□□□□ 0.82
SCRN1-205ENST00000425819 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
SCRN1-205ENST00000425819 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
SCRN1-205ENST00000425819 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
SCRN1-205ENST00000425819 PTF1AQ7RTS3 328 aa20.18■□□□□ 0.82
SCRN1-205ENST00000425819 TNNQ9UQP3 1299 aa20.18■□□□□ 0.82
SCRN1-205ENST00000425819 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
SCRN1-205ENST00000425819 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
SCRN1-205ENST00000425819 USP16Q9Y5T5 823 aa20.17■□□□□ 0.82
SCRN1-205ENST00000425819 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
SCRN1-205ENST00000425819 CHPF2Q9P2E5 772 aa20.17■□□□□ 0.82
SCRN1-205ENST00000425819 RGS12O14924 1447 aa20.16■□□□□ 0.82
SCRN1-205ENST00000425819 C5P01031 1676 aa20.16■□□□□ 0.82
SCRN1-205ENST00000425819 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
SCRN1-205ENST00000425819 ATF7IPQ6VMQ6 1270 aa20.16■□□□□ 0.82
SCRN1-205ENST00000425819 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
SCRN1-205ENST00000425819 TRIM27P14373 513 aa20.15■□□□□ 0.82
SCRN1-205ENST00000425819 FAM196AQ6ZSG2 479 aa20.15■□□□□ 0.82
SCRN1-205ENST00000425819 G2E3Q7L622 706 aa20.15■□□□□ 0.82
SCRN1-205ENST00000425819 ANXA1P04083 346 aa20.14■□□□□ 0.81
SCRN1-205ENST00000425819 PANK1Q8TE04 598 aa20.14■□□□□ 0.81
SCRN1-205ENST00000425819 PDE3AQ14432 1141 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms