RNA–Protein interactions for RNA: ENST00000425006.3

VSTM1-205, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VSTM1, Length 608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-205ENST00000425006 PIM2Q9P1W9 311 aa16.03■□□□□ 0.16
VSTM1-205ENST00000425006 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
VSTM1-205ENST00000425006 NLGN1Q8N2Q7 840 aa16.02■□□□□ 0.16
VSTM1-205ENST00000425006 PUS7Q96PZ0 661 aaKnown RBP16.02■□□□□ 0.16
VSTM1-205ENST00000425006 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
VSTM1-205ENST00000425006 ARFGEF1Q9Y6D6 1849 aa16.01■□□□□ 0.15
VSTM1-205ENST00000425006 CGNL1Q0VF96 1302 aa16.01■□□□□ 0.15
VSTM1-205ENST00000425006 TMF1P82094 1093 aa16.01■□□□□ 0.15
VSTM1-205ENST00000425006 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
VSTM1-205ENST00000425006 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
VSTM1-205ENST00000425006 LOC102724428A0A0B4J2F2 783 aa16■□□□□ 0.15
VSTM1-205ENST00000425006 SLC24A1O60721 1099 aa16■□□□□ 0.15
VSTM1-205ENST00000425006 SIK1P57059 783 aa16■□□□□ 0.15
VSTM1-205ENST00000425006 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
VSTM1-205ENST00000425006 PCDH11XQ9BZA7 1347 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 PCDH11YQ9BZA8 1340 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 ZC3H4Q9UPT8 1303 aaKnown RBP15.99■□□□□ 0.15
VSTM1-205ENST00000425006 GLTPD2A6NH11 291 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 HOXC9P31274 260 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 AMPHP49418 695 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 LBX1P52954 281 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 PARP3Q9Y6F1 533 aa15.99■□□□□ 0.15
VSTM1-205ENST00000425006 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
VSTM1-205ENST00000425006 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
VSTM1-205ENST00000425006 PIGBQ92521 554 aa15.98■□□□□ 0.15
VSTM1-205ENST00000425006 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
VSTM1-205ENST00000425006 MAP3K19Q56UN5 1328 aa15.97■□□□□ 0.15
VSTM1-205ENST00000425006 C4AP0C0L4 1744 aa15.97■□□□□ 0.15
VSTM1-205ENST00000425006 ITPK1Q13572 414 aa15.97■□□□□ 0.15
VSTM1-205ENST00000425006 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
VSTM1-205ENST00000425006 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
VSTM1-205ENST00000425006 CCDC85CA6NKD9 419 aa15.96■□□□□ 0.15
VSTM1-205ENST00000425006 RASSF7Q02833 373 aa15.96■□□□□ 0.15
VSTM1-205ENST00000425006 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
VSTM1-205ENST00000425006 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.15
VSTM1-205ENST00000425006 CNTNAP1P78357 1384 aa15.96■□□□□ 0.15
VSTM1-205ENST00000425006 EDC4Q6P2E9 1401 aaKnown RBP15.95■□□□□ 0.14
VSTM1-205ENST00000425006 SBF1O95248 1867 aa15.95■□□□□ 0.14
VSTM1-205ENST00000425006 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
VSTM1-205ENST00000425006 TMC1Q8TDI8 760 aa15.95■□□□□ 0.14
VSTM1-205ENST00000425006 SLC12A5Q9H2X9 1139 aa15.95■□□□□ 0.14
VSTM1-205ENST00000425006 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
VSTM1-205ENST00000425006 CYP27B1O15528 508 aa15.94■□□□□ 0.14
VSTM1-205ENST00000425006 GYS1P13807 737 aa15.94■□□□□ 0.14
VSTM1-205ENST00000425006 RGS19P49795 217 aa15.94■□□□□ 0.14
VSTM1-205ENST00000425006 MAP2P11137 1827 aaKnown RBP15.94■□□□□ 0.14
VSTM1-205ENST00000425006 LMNB1P20700 586 aa15.93■□□□□ 0.14
VSTM1-205ENST00000425006 CHRNA5P30532 468 aa15.93■□□□□ 0.14
VSTM1-205ENST00000425006 ITGB4P16144 1822 aa15.93■□□□□ 0.14
VSTM1-205ENST00000425006 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
VSTM1-205ENST00000425006 FBLN1P23142 703 aa15.92■□□□□ 0.14
VSTM1-205ENST00000425006 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
VSTM1-205ENST00000425006 WBP1LQ9NX94 342 aa15.92■□□□□ 0.14
VSTM1-205ENST00000425006 POTECB2RU33 542 aa15.91■□□□□ 0.14
VSTM1-205ENST00000425006 RFC4P35249 363 aa15.91■□□□□ 0.14
VSTM1-205ENST00000425006 VEGFBP49765 207 aa15.91■□□□□ 0.14
VSTM1-205ENST00000425006 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
VSTM1-205ENST00000425006 ASAP1Q9ULH1 1129 aa15.91■□□□□ 0.14
VSTM1-205ENST00000425006 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
VSTM1-205ENST00000425006 HSPA8P11142 646 aaKnown RBP15.9■□□□□ 0.14
VSTM1-205ENST00000425006 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
VSTM1-205ENST00000425006 SMG6Q86US8 1419 aaKnown RBP15.9■□□□□ 0.14
VSTM1-205ENST00000425006 ADRA2BP18089 450 aa15.89■□□□□ 0.13
VSTM1-205ENST00000425006 COG3Q96JB2 828 aa15.89■□□□□ 0.13
VSTM1-205ENST00000425006 TERF2IPQ9NYB0 399 aa15.89■□□□□ 0.13
VSTM1-205ENST00000425006 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
VSTM1-205ENST00000425006 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
VSTM1-205ENST00000425006 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
VSTM1-205ENST00000425006 DPY19L2Q6NUT2 758 aa15.88■□□□□ 0.13
VSTM1-205ENST00000425006 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
VSTM1-205ENST00000425006 TNRC18O15417 2968 aaPredicted RBP15.87■□□□□ 0.13
VSTM1-205ENST00000425006 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
VSTM1-205ENST00000425006 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
VSTM1-205ENST00000425006 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
VSTM1-205ENST00000425006 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
VSTM1-205ENST00000425006 DDR1Q08345 913 aa15.85■□□□□ 0.13
VSTM1-205ENST00000425006 RRS1Q15050 365 aaKnown RBP15.85■□□□□ 0.13
VSTM1-205ENST00000425006 NKX1-1Q15270 411 aaPredicted RBP15.85■□□□□ 0.13
VSTM1-205ENST00000425006 RPS6KA4O75676 772 aa15.84■□□□□ 0.13
VSTM1-205ENST00000425006 RC3H1Q5TC82 1133 aaKnown RBP15.84■□□□□ 0.13
VSTM1-205ENST00000425006 ATG3Q9NT62 314 aa15.84■□□□□ 0.13
VSTM1-205ENST00000425006 PDE4DIPQ5VU43 2346 aa15.83■□□□□ 0.12
VSTM1-205ENST00000425006 TMEM88BA6NKF7 163 aa15.83■□□□□ 0.12
VSTM1-205ENST00000425006 FKBP8Q14318 412 aa15.83■□□□□ 0.12
VSTM1-205ENST00000425006 PASKQ96RG2 1323 aa15.83■□□□□ 0.12
VSTM1-205ENST00000425006 MAP2K1Q02750 393 aaPredicted RBP15.82■□□□□ 0.12
VSTM1-205ENST00000425006 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
VSTM1-205ENST00000425006 SRP68Q9UHB9 627 aaKnown RBP15.82■□□□□ 0.12
VSTM1-205ENST00000425006 KDRP35968 1356 aa15.82■□□□□ 0.12
VSTM1-205ENST00000425006 NFKBIEO00221 500 aa15.81■□□□□ 0.12
VSTM1-205ENST00000425006 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
VSTM1-205ENST00000425006 CNTNAP4Q9C0A0 1308 aa15.81■□□□□ 0.12
VSTM1-205ENST00000425006 SPG7Q9UQ90 795 aa15.81■□□□□ 0.12
VSTM1-205ENST00000425006 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
VSTM1-205ENST00000425006 HSP90AB2PQ58FF8 381 aa15.8■□□□□ 0.12
VSTM1-205ENST00000425006 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
VSTM1-205ENST00000425006 ERFEQ4G0M1 354 aa15.79■□□□□ 0.12
VSTM1-205ENST00000425006 INSRP06213 1382 aa15.78■□□□□ 0.12
VSTM1-205ENST00000425006 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
VSTM1-205ENST00000425006 DEFB115Q30KQ5 88 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms