RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 MRC1P22897 1456 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 ZNF831Q5JPB2 1677 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 MSH5O43196 834 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 PRKAR2BP31323 418 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 NFATC2IPQ8NCF5 419 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
PRDM1-204ENST00000424894 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRDM1-204ENST00000424894 TFCP2L1Q9NZI6 479 aa9.59□□□□□ -0.87
PRDM1-204ENST00000424894 CICQ96RK0 1608 aaPredicted RBP9.58□□□□□ -0.88
PRDM1-204ENST00000424894 PTCD1O75127 700 aaKnown RBP9.58□□□□□ -0.88
PRDM1-204ENST00000424894 CABP4P57796 275 aa9.58□□□□□ -0.88
PRDM1-204ENST00000424894 C1orf141Q5JVX7 400 aa9.58□□□□□ -0.88
PRDM1-204ENST00000424894 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
PRDM1-204ENST00000424894 UTRNP46939 3433 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 U2AF1L5P0DN76 240 aaPredicted RBP9.57□□□□□ -0.88
PRDM1-204ENST00000424894 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 SIK1P57059 783 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 U2AF1Q01081 240 aaKnown RBP eCLIP9.57□□□□□ -0.88
PRDM1-204ENST00000424894 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 SGIP1Q9BQI5 828 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 SPON1Q9HCB6 807 aa9.57□□□□□ -0.88
PRDM1-204ENST00000424894 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
PRDM1-204ENST00000424894 N4BP2Q86UW6 1770 aaPredicted RBP9.56□□□□□ -0.88
PRDM1-204ENST00000424894 RNMTO43148 476 aaKnown RBP9.56□□□□□ -0.88
PRDM1-204ENST00000424894 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
PRDM1-204ENST00000424894 AMOTQ4VCS5 1084 aa9.56□□□□□ -0.88
PRDM1-204ENST00000424894 AKAP4Q5JQC9 854 aa9.56□□□□□ -0.88
PRDM1-204ENST00000424894 KIAA1551Q9HCM1 1747 aa9.56□□□□□ -0.88
PRDM1-204ENST00000424894 KDM3BQ7LBC6 1761 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 MAP3K5Q99683 1374 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 ERVV-2B6SEH9 535 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 KCNQ3O43525 872 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 MCM10Q7L590 875 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 CFAP53Q96M91 514 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 FHDC1Q9C0D6 1143 aaPredicted RBP9.55□□□□□ -0.88
PRDM1-204ENST00000424894 MTFR1LQ9H019 292 aa9.55□□□□□ -0.88
PRDM1-204ENST00000424894 GNPATO15228 680 aa9.54□□□□□ -0.88
PRDM1-204ENST00000424894 SMARCC1Q92922 1105 aaPredicted RBP9.54□□□□□ -0.88
PRDM1-204ENST00000424894 AK7Q96M32 723 aa9.54□□□□□ -0.88
PRDM1-204ENST00000424894 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
PRDM1-204ENST00000424894 SLC52A2Q9HAB3 445 aa9.54□□□□□ -0.88
PRDM1-204ENST00000424894 WWC3Q9ULE0 1092 aa9.54□□□□□ -0.88
PRDM1-204ENST00000424894 AFDNP55196 1824 aaKnown RBP9.54□□□□□ -0.88
PRDM1-204ENST00000424894 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
PRDM1-204ENST00000424894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
PRDM1-204ENST00000424894 HSP90AB1P08238 724 aaKnown RBP9.53□□□□□ -0.88
PRDM1-204ENST00000424894 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
PRDM1-204ENST00000424894 DNAJC10Q8IXB1 793 aa9.53□□□□□ -0.88
PRDM1-204ENST00000424894 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
PRDM1-204ENST00000424894 NLGN2Q8NFZ4 835 aa9.53□□□□□ -0.88
PRDM1-204ENST00000424894 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.88
PRDM1-204ENST00000424894 PRAMEF22A3QJZ6 481 aa9.52□□□□□ -0.89
PRDM1-204ENST00000424894 PIP4K2AP48426 406 aaPredicted RBP9.52□□□□□ -0.89
PRDM1-204ENST00000424894 MIS18AQ9NYP9 233 aa9.52□□□□□ -0.89
PRDM1-204ENST00000424894 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
PRDM1-204ENST00000424894 GNAT3A8MTJ3 354 aa9.51□□□□□ -0.89
PRDM1-204ENST00000424894 ARXQ96QS3 562 aa9.51□□□□□ -0.89
PRDM1-204ENST00000424894 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
PRDM1-204ENST00000424894 SCN7AQ01118 1682 aa9.51□□□□□ -0.89
PRDM1-204ENST00000424894 CACNA1SQ13698 1873 aa9.51□□□□□ -0.89
PRDM1-204ENST00000424894 BCORQ6W2J9 1755 aa9.5□□□□□ -0.89
PRDM1-204ENST00000424894 KIF13BQ9NQT8 1826 aa9.5□□□□□ -0.89
PRDM1-204ENST00000424894 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
PRDM1-204ENST00000424894 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
PRDM1-204ENST00000424894 SYT17Q9BSW7 474 aa9.5□□□□□ -0.89
PRDM1-204ENST00000424894 MYBBP1AQ9BQG0 1328 aaKnown RBP9.5□□□□□ -0.89
PRDM1-204ENST00000424894 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
PRDM1-204ENST00000424894 INTS5Q6P9B9 1019 aaKnown RBP9.49□□□□□ -0.89
PRDM1-204ENST00000424894 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
PRDM1-204ENST00000424894 ZNF496Q96IT1 587 aaPredicted RBP9.49□□□□□ -0.89
PRDM1-204ENST00000424894 PRKRIP1Q9H875 184 aaPredicted RBP9.49□□□□□ -0.89
PRDM1-204ENST00000424894 NUDCQ9Y266 331 aa9.49□□□□□ -0.89
PRDM1-204ENST00000424894 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
PRDM1-204ENST00000424894 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
PRDM1-204ENST00000424894 TEFQ10587 303 aa9.48□□□□□ -0.89
PRDM1-204ENST00000424894 RALBP1Q15311 655 aa9.48□□□□□ -0.89
PRDM1-204ENST00000424894 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
PRDM1-204ENST00000424894 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
PRDM1-204ENST00000424894 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
PRDM1-204ENST00000424894 CHD4Q14839 1912 aa9.47□□□□□ -0.89
PRDM1-204ENST00000424894 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
PRDM1-204ENST00000424894 FCHSD2O94868 740 aa9.47□□□□□ -0.89
PRDM1-204ENST00000424894 CYP19A1P11511 503 aaPredicted RBP9.47□□□□□ -0.89
PRDM1-204ENST00000424894 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
PRDM1-204ENST00000424894 SSFA2P28290 1259 aa9.47□□□□□ -0.89
PRDM1-204ENST00000424894 ZEB1P37275 1124 aaPredicted RBP9.47□□□□□ -0.89
PRDM1-204ENST00000424894 NEUROD2Q15784 382 aa9.47□□□□□ -0.89
PRDM1-204ENST00000424894 CNTNAP4Q9C0A0 1308 aa9.47□□□□□ -0.89
PRDM1-204ENST00000424894 COL11A2P13942 1736 aaPredicted RBP9.47□□□□□ -0.89
PRDM1-204ENST00000424894 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
PRDM1-204ENST00000424894 GYS1P13807 737 aa9.46□□□□□ -0.9
PRDM1-204ENST00000424894 POLD1P28340 1107 aa9.46□□□□□ -0.9
PRDM1-204ENST00000424894 FKBP8Q14318 412 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms