RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 EVA1CP58658 441 aa18.12■□□□□ 0.49
LINC00839-201ENST00000424751 SHANK3Q9BYB0 1731 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
LINC00839-201ENST00000424751 TOM1O60784 492 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 IGHDP01880 384 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
LINC00839-201ENST00000424751 PHKG2P15735 406 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 C1orf141Q5JVX7 400 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 COL22A1Q8NFW1 1626 aaPredicted RBP18.11■□□□□ 0.49
LINC00839-201ENST00000424751 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
LINC00839-201ENST00000424751 PCDHB15Q9Y5E8 787 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
LINC00839-201ENST00000424751 KDM3BQ7LBC6 1761 aa18.11■□□□□ 0.49
LINC00839-201ENST00000424751 AMOTQ4VCS5 1084 aa18.1■□□□□ 0.49
LINC00839-201ENST00000424751 SCN11AQ9UI33 1791 aa18.1■□□□□ 0.49
LINC00839-201ENST00000424751 PKD1L3Q7Z443 1732 aa18.1■□□□□ 0.49
LINC00839-201ENST00000424751 ANXA1P04083 346 aa18.1■□□□□ 0.49
LINC00839-201ENST00000424751 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
LINC00839-201ENST00000424751 ABCC6O95255 1503 aa18.09■□□□□ 0.49
LINC00839-201ENST00000424751 BTBD11A6QL63 1104 aa18.08■□□□□ 0.48
LINC00839-201ENST00000424751 ITPRIPQ8IWB1 547 aa18.08■□□□□ 0.48
LINC00839-201ENST00000424751 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
LINC00839-201ENST00000424751 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
LINC00839-201ENST00000424751 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
LINC00839-201ENST00000424751 TEFQ10587 303 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 OVOS2A0A0G2JMS6 1433 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 RGS12O14924 1447 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
LINC00839-201ENST00000424751 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
LINC00839-201ENST00000424751 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
LINC00839-201ENST00000424751 F6X3S4 739 aa18.06■□□□□ 0.48
LINC00839-201ENST00000424751 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
LINC00839-201ENST00000424751 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
LINC00839-201ENST00000424751 CARD10Q9BWT7 1032 aa18.06■□□□□ 0.48
LINC00839-201ENST00000424751 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
LINC00839-201ENST00000424751 COL14A1Q05707 1796 aaKnown RBP18.05■□□□□ 0.48
LINC00839-201ENST00000424751 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
LINC00839-201ENST00000424751 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
LINC00839-201ENST00000424751 BRPF3Q9ULD4 1205 aa18.04■□□□□ 0.48
LINC00839-201ENST00000424751 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
LINC00839-201ENST00000424751 PARP4Q9UKK3 1724 aaKnown RBP18.04■□□□□ 0.48
LINC00839-201ENST00000424751 IL2RBP14784 551 aa18.03■□□□□ 0.48
LINC00839-201ENST00000424751 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
LINC00839-201ENST00000424751 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
LINC00839-201ENST00000424751 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
LINC00839-201ENST00000424751 KIF16BQ96L93 1317 aa18.03■□□□□ 0.48
LINC00839-201ENST00000424751 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
LINC00839-201ENST00000424751 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
LINC00839-201ENST00000424751 C5P01031 1676 aa18.02■□□□□ 0.48
LINC00839-201ENST00000424751 PROSER3Q2NL68 480 aa18.02■□□□□ 0.48
LINC00839-201ENST00000424751 TOGARAM1Q9Y4F4 1720 aa18.02■□□□□ 0.48
LINC00839-201ENST00000424751 BRPF1P55201 1214 aaPredicted RBP18.02■□□□□ 0.47
LINC00839-201ENST00000424751 SLC52A2Q9HAB3 445 aa18.02■□□□□ 0.47
LINC00839-201ENST00000424751 NRAPQ86VF7 1730 aa18.01■□□□□ 0.47
LINC00839-201ENST00000424751 ABCC4O15439 1325 aa18■□□□□ 0.47
LINC00839-201ENST00000424751 CHPF2Q9P2E5 772 aa18■□□□□ 0.47
LINC00839-201ENST00000424751 HSPA1LP34931 641 aa17.99■□□□□ 0.47
LINC00839-201ENST00000424751 HDGFL1Q5TGJ6 251 aa17.99■□□□□ 0.47
LINC00839-201ENST00000424751 LRP6O75581 1613 aa17.99■□□□□ 0.47
LINC00839-201ENST00000424751 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
LINC00839-201ENST00000424751 C8orf37Q96NL8 207 aa17.98■□□□□ 0.47
LINC00839-201ENST00000424751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.47
LINC00839-201ENST00000424751 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
LINC00839-201ENST00000424751 GIGYF1O75420 1035 aaPredicted RBP17.97■□□□□ 0.47
LINC00839-201ENST00000424751 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
LINC00839-201ENST00000424751 EP400Q96L91 3159 aa17.97■□□□□ 0.47
LINC00839-201ENST00000424751 ZBTB7BO15156 539 aaPredicted RBP17.97■□□□□ 0.47
LINC00839-201ENST00000424751 ZNF790Q6PG37 636 aa17.97■□□□□ 0.47
LINC00839-201ENST00000424751 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
LINC00839-201ENST00000424751 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
LINC00839-201ENST00000424751 RGS3P49796 1198 aa17.96■□□□□ 0.47
LINC00839-201ENST00000424751 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
LINC00839-201ENST00000424751 GLI3P10071 1580 aa17.96■□□□□ 0.47
LINC00839-201ENST00000424751 CABP4P57796 275 aa17.96■□□□□ 0.47
LINC00839-201ENST00000424751 FLIIQ13045 1269 aa17.96■□□□□ 0.47
LINC00839-201ENST00000424751 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.46
LINC00839-201ENST00000424751 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
LINC00839-201ENST00000424751 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
LINC00839-201ENST00000424751 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
LINC00839-201ENST00000424751 ARHGAP45Q92619 1136 aa17.95■□□□□ 0.46
LINC00839-201ENST00000424751 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
LINC00839-201ENST00000424751 WNK3Q9BYP7 1800 aa17.94■□□□□ 0.46
LINC00839-201ENST00000424751 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
LINC00839-201ENST00000424751 MRC1P22897 1456 aa17.94■□□□□ 0.46
LINC00839-201ENST00000424751 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
LINC00839-201ENST00000424751 MEIS3Q99687 375 aa17.93■□□□□ 0.46
LINC00839-201ENST00000424751 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
LINC00839-201ENST00000424751 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
LINC00839-201ENST00000424751 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
LINC00839-201ENST00000424751 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
LINC00839-201ENST00000424751 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
LINC00839-201ENST00000424751 ITGB4P16144 1822 aa17.92■□□□□ 0.46
LINC00839-201ENST00000424751 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
LINC00839-201ENST00000424751 STK31Q9BXU1 1019 aa17.92■□□□□ 0.46
LINC00839-201ENST00000424751 SLIT2O94813 1529 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms