RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TIMMDC1Q9NPL8 285 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 HRH3Q9Y5N1 445 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 GPR25O00155 361 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 ADAMTS2O95450 1211 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 SRSF11Q05519 484 aaKnown RBP5.93□□□□□ -1.46
SF3B1-205ENST00000424674 MAP7D1Q3KQU3 841 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 GNASQ5JWF2 1037 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 PLPP7Q8NBV4 271 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 WHAMMQ8TF30 809 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 XAGE2Q96GT9 111 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 FHDC1Q9C0D6 1143 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-205ENST00000424674 ETNK1Q9HBU6 452 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 MBIPQ9NS73 344 aa5.93□□□□□ -1.46
SF3B1-205ENST00000424674 RNF225M0QZC1 329 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-205ENST00000424674 F11P03951 625 aa5.92□□□□□ -1.46
SF3B1-205ENST00000424674 TLR1Q15399 786 aa5.92□□□□□ -1.46
SF3B1-205ENST00000424674 TMEM214Q6NUQ4 689 aaKnown RBP5.92□□□□□ -1.46
SF3B1-205ENST00000424674 WWC1Q8IX03 1113 aa5.92□□□□□ -1.46
SF3B1-205ENST00000424674 GTPBP3Q969Y2 492 aaKnown RBP5.92□□□□□ -1.46
SF3B1-205ENST00000424674 POM121Q96HA1 1249 aa5.92□□□□□ -1.46
SF3B1-205ENST00000424674 TRERF1Q96PN7 1200 aa5.92□□□□□ -1.46
SF3B1-205ENST00000424674 NUCKS1Q9H1E3 243 aaKnown RBP5.92□□□□□ -1.46
SF3B1-205ENST00000424674 A0A1B0GTH6 734 aa5.91□□□□□ -1.46
SF3B1-205ENST00000424674 STAU1O95793 577 aaKnown RBP5.91□□□□□ -1.46
SF3B1-205ENST00000424674 PHKA2P46019 1235 aa5.91□□□□□ -1.46
SF3B1-205ENST00000424674 RHBDD1Q8TEB9 315 aa5.91□□□□□ -1.46
SF3B1-205ENST00000424674 ARID3AQ99856 593 aa5.91□□□□□ -1.46
SF3B1-205ENST00000424674 ADAMTS8Q9UP79 889 aa5.91□□□□□ -1.46
SF3B1-205ENST00000424674 RAD21O60216 631 aa5.9□□□□□ -1.46
SF3B1-205ENST00000424674 SCNN1DP51172 638 aa5.9□□□□□ -1.46
SF3B1-205ENST00000424674 MAP3K10Q02779 954 aa5.9□□□□□ -1.46
SF3B1-205ENST00000424674 C4orf17Q53FE4 359 aa5.9□□□□□ -1.46
SF3B1-205ENST00000424674 GPAMQ9HCL2 828 aa5.9□□□□□ -1.46
SF3B1-205ENST00000424674 SHROOM4Q9ULL8 1493 aa5.9□□□□□ -1.47
SF3B1-205ENST00000424674 PIK3CDO00329 1044 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 ARHGEF15O94989 841 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 GDF10P55107 478 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 KCNMA1Q12791 1236 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 FLIIQ13045 1269 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 LYPD4Q6UWN0 246 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 PPARGC1BQ86YN6 1023 aaKnown RBP5.89□□□□□ -1.47
SF3B1-205ENST00000424674 IGF1RP08069 1367 aa5.89□□□□□ -1.47
SF3B1-205ENST00000424674 INHAP05111 366 aa5.88□□□□□ -1.47
SF3B1-205ENST00000424674 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-205ENST00000424674 CSB-PGBD3P0DP91 1061 aa5.88□□□□□ -1.47
SF3B1-205ENST00000424674 MX2P20592 715 aa5.88□□□□□ -1.47
SF3B1-205ENST00000424674 LBRQ14739 615 aaKnown RBP5.88□□□□□ -1.47
SF3B1-205ENST00000424674 EML3Q32P44 896 aa5.88□□□□□ -1.47
SF3B1-205ENST00000424674 PGBD3Q8N328 593 aa5.88□□□□□ -1.47
SF3B1-205ENST00000424674 THBS1P07996 1170 aa5.87□□□□□ -1.47
SF3B1-205ENST00000424674 SKIP12755 728 aa5.87□□□□□ -1.47
SF3B1-205ENST00000424674 PLA2G4AP47712 749 aa5.87□□□□□ -1.47
SF3B1-205ENST00000424674 NFATC2IPQ8NCF5 419 aa5.87□□□□□ -1.47
SF3B1-205ENST00000424674 ALG2Q9H553 416 aa5.87□□□□□ -1.47
SF3B1-205ENST00000424674 RUBCNLQ9H714 662 aa5.87□□□□□ -1.47
SF3B1-205ENST00000424674 NSFL1CQ9UNZ2 370 aaKnown RBP5.87□□□□□ -1.47
SF3B1-205ENST00000424674 LOC105371045A0A1W2PR82 267 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 TMEM229AB2RXF0 380 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 MSX1P28360 303 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 GSK3AP49840 483 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 MARSP56192 900 aaKnown RBP5.86□□□□□ -1.47
SF3B1-205ENST00000424674 EFHC2Q5JST6 749 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 TBC1D9Q6ZT07 1266 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 CLUAP1Q96AJ1 413 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 CFHR5Q9BXR6 569 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 ENAMQ9NRM1 1142 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 PHF24Q9UPV7 400 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 NOD1Q9Y239 953 aa5.86□□□□□ -1.47
SF3B1-205ENST00000424674 LZTS3O60299 673 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-205ENST00000424674 CDK11BP21127 795 aaKnown RBP5.85□□□□□ -1.47
SF3B1-205ENST00000424674 MAP2K3P46734 347 aa5.85□□□□□ -1.47
SF3B1-205ENST00000424674 SMTNP53814 917 aa5.85□□□□□ -1.47
SF3B1-205ENST00000424674 NCOA4Q13772 614 aa5.85□□□□□ -1.47
SF3B1-205ENST00000424674 NIFKQ9BYG3 293 aaKnown RBP5.85□□□□□ -1.47
SF3B1-205ENST00000424674 CRISPLD1Q9H336 500 aa5.85□□□□□ -1.47
SF3B1-205ENST00000424674 SERTAD1Q9UHV2 236 aa5.85□□□□□ -1.47
SF3B1-205ENST00000424674 CDK11AQ9UQ88 783 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-205ENST00000424674 POM121CA8CG34 1229 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 USP17L5A8MUK1 530 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 BCRP11274 1271 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 HSP90B1P14625 803 aaKnown RBP5.84□□□□□ -1.47
SF3B1-205ENST00000424674 GTF2IP78347 998 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 RASSF7Q02833 373 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 PSME1Q06323 249 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 UBAP2LQ14157 1087 aaKnown RBP5.84□□□□□ -1.47
SF3B1-205ENST00000424674 MTFR1Q15390 333 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 TMEM151AQ8N4L1 468 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 C1orf216Q8TAB5 229 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 ACDQ96AP0 544 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 SCARF2Q96GP6 870 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-205ENST00000424674 PCDHGA11Q9Y5H2 935 aa5.84□□□□□ -1.47
SF3B1-205ENST00000424674 A6NJY4 79 aa5.83□□□□□ -1.48
SF3B1-205ENST00000424674 GDF11O95390 407 aa5.83□□□□□ -1.48
SF3B1-205ENST00000424674 ATP4AP20648 1035 aa5.83□□□□□ -1.48
SF3B1-205ENST00000424674 NBPF1Q3BBV0 1214 aa5.83□□□□□ -1.48
SF3B1-205ENST00000424674 SLC4A9Q96Q91 983 aa5.83□□□□□ -1.48
SF3B1-205ENST00000424674 ATXN7L1Q9ULK2 861 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-205ENST00000424674 IQSEC3Q9UPP2 1182 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-205ENST00000424674 CDK2AP1O14519 115 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 BACH1O14867 736 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms