RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 ARID3CA6NKF2 412 aa9.75□□□□□ -0.85
SEMA3A-203ENST00000424555 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
SEMA3A-203ENST00000424555 PRKRIP1Q9H875 184 aaPredicted RBP9.75□□□□□ -0.85
SEMA3A-203ENST00000424555 UHRF1BP1Q6BDS2 1440 aa9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 SHANK2Q9UPX8 1470 aa9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 MAGEB6P1A0A0J9YX57 407 aa9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 VASH1Q7L8A9 365 aaPredicted RBP9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 ARID4BQ4LE39 1312 aaPredicted RBP9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 ANKRD30AQ9BXX3 1397 aa9.74□□□□□ -0.85
SEMA3A-203ENST00000424555 PTPRGP23470 1445 aa9.73□□□□□ -0.85
SEMA3A-203ENST00000424555 ERFEQ4G0M1 354 aa9.73□□□□□ -0.85
SEMA3A-203ENST00000424555 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
SEMA3A-203ENST00000424555 HELBQ8NG08 1087 aaPredicted RBP9.73□□□□□ -0.85
SEMA3A-203ENST00000424555 KDM5DQ9BY66 1539 aa9.72□□□□□ -0.85
SEMA3A-203ENST00000424555 ITSN2Q9NZM3 1697 aa9.72□□□□□ -0.85
SEMA3A-203ENST00000424555 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
SEMA3A-203ENST00000424555 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
SEMA3A-203ENST00000424555 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
SEMA3A-203ENST00000424555 KIF14Q15058 1648 aa9.71□□□□□ -0.85
SEMA3A-203ENST00000424555 CCDC184Q52MB2 194 aa9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 GPR161Q8N6U8 529 aaKnown RBP9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 EMILIN1Q9Y6C2 1016 aa9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 ANKRD50Q9ULJ7 1429 aa9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 ERCC6Q03468 1493 aa9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 ADGBQ8N7X0 1667 aa9.71□□□□□ -0.86
SEMA3A-203ENST00000424555 UPP2O95045 317 aa9.7□□□□□ -0.86
SEMA3A-203ENST00000424555 CBLBQ13191 982 aa9.7□□□□□ -0.86
SEMA3A-203ENST00000424555 CCDC116Q8IYX3 515 aa9.7□□□□□ -0.86
SEMA3A-203ENST00000424555 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
SEMA3A-203ENST00000424555 DHX29Q7Z478 1369 aaKnown RBP9.7□□□□□ -0.86
SEMA3A-203ENST00000424555 CROCC2H7BZ55 1655 aa9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 NEFLP07196 543 aa9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 KRT76Q01546 638 aa9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 ARHGEF5Q12774 1597 aa9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 OCSTAMPQ9BR26 566 aa9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
SEMA3A-203ENST00000424555 HNRNPUQ00839 825 aaKnown RBP eCLIP9.68□□□□□ -0.86
SEMA3A-203ENST00000424555 Q6ZVU0 165 aa9.68□□□□□ -0.86
SEMA3A-203ENST00000424555 C9orf84Q5VXU9 1444 aa9.67□□□□□ -0.86
SEMA3A-203ENST00000424555 PDXDC2PQ6P474 469 aa9.67□□□□□ -0.86
SEMA3A-203ENST00000424555 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
SEMA3A-203ENST00000424555 ARHGEF12Q9NZN5 1544 aa9.66□□□□□ -0.86
SEMA3A-203ENST00000424555 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
SEMA3A-203ENST00000424555 ZBED9Q6R2W3 1325 aa9.66□□□□□ -0.86
SEMA3A-203ENST00000424555 FIGNL2A6NMB9 653 aa9.66□□□□□ -0.86
SEMA3A-203ENST00000424555 FKBPLQ9UIM3 349 aa9.66□□□□□ -0.86
SEMA3A-203ENST00000424555 POLR1AO95602 1720 aaPredicted RBP9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 CDC42BPAQ5VT25 1732 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 NUP155O75694 1391 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 TTLL8A6PVC2 850 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 GSK3AP49840 483 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 PTSQ03393 145 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 NR6A1Q15406 480 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 KCTD15Q96SI1 283 aaPredicted RBP9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 ARHGAP9Q9BRR9 750 aa9.65□□□□□ -0.86
SEMA3A-203ENST00000424555 USP47Q96K76 1375 aa9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 SPINT1O43278 529 aa9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 TSPY4P0CV99 314 aa9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 TSPY10P0CW01 314 aa9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
SEMA3A-203ENST00000424555 ROCK2O75116 1388 aaKnown RBP9.63□□□□□ -0.87
SEMA3A-203ENST00000424555 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
SEMA3A-203ENST00000424555 KDM5CP41229 1560 aa9.63□□□□□ -0.87
SEMA3A-203ENST00000424555 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
SEMA3A-203ENST00000424555 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 PPP2R2DQ66LE6 453 aa9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 AGBL1Q96MI9 1066 aa9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 MRS2Q9HD23 443 aa9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 MAST1Q9Y2H9 1570 aa9.62□□□□□ -0.87
SEMA3A-203ENST00000424555 INTS6LQ5JSJ4 861 aaKnown RBP9.61□□□□□ -0.87
SEMA3A-203ENST00000424555 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
SEMA3A-203ENST00000424555 FAM117AQ9C073 453 aa9.61□□□□□ -0.87
SEMA3A-203ENST00000424555 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
SEMA3A-203ENST00000424555 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
SEMA3A-203ENST00000424555 PLA2R1Q13018 1463 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 CCDC141Q6ZP82 1450 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 SH3D19Q5HYK7 790 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 CCDC155Q8N6L0 562 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 PNISRQ8TF01 805 aaKnown RBP9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 CNTNAP3BQ96NU0 1288 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 CNTNAP3Q9BZ76 1288 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 GPRASP1Q5JY77 1395 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 KTN1Q86UP2 1357 aaKnown RBP9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 SHROOM2Q13796 1616 aa9.6□□□□□ -0.87
SEMA3A-203ENST00000424555 ATP10AO60312 1499 aa9.59□□□□□ -0.87
SEMA3A-203ENST00000424555 SAMD9LQ8IVG5 1584 aa9.59□□□□□ -0.87
SEMA3A-203ENST00000424555 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
SEMA3A-203ENST00000424555 SLC35F4A4IF30 521 aa9.59□□□□□ -0.87
SEMA3A-203ENST00000424555 CTSOP43234 321 aaPredicted RBP9.59□□□□□ -0.87
SEMA3A-203ENST00000424555 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
SEMA3A-203ENST00000424555 ZBTB33Q86T24 672 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms