RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 SMARCC1Q92922 1105 aaPredicted RBP14.56□□□□□ -0.08
TOP3B-203ENST00000424393 PLEKHF1Q96S99 279 aa14.56□□□□□ -0.08
TOP3B-203ENST00000424393 TUBGCP6Q96RT7 1819 aa14.56□□□□□ -0.08
TOP3B-203ENST00000424393 SIPA1L3O60292 1781 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-203ENST00000424393 DLG5Q8TDM6 1919 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 SLC15A2Q16348 729 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 ZNF827Q17R98 1081 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 SLC52A2Q9HAB3 445 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 STK32BQ9NY57 414 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 ZNF831Q5JPB2 1677 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 QSER1Q2KHR3 1735 aa14.55□□□□□ -0.08
TOP3B-203ENST00000424393 GNAT3A8MTJ3 354 aa14.54□□□□□ -0.08
TOP3B-203ENST00000424393 ZBTB7AO95365 584 aa14.54□□□□□ -0.08
TOP3B-203ENST00000424393 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
TOP3B-203ENST00000424393 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
TOP3B-203ENST00000424393 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
TOP3B-203ENST00000424393 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
TOP3B-203ENST00000424393 C4BP0C0L5 1744 aa14.52□□□□□ -0.08
TOP3B-203ENST00000424393 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
TOP3B-203ENST00000424393 LOC102724428A0A0B4J2F2 783 aa14.52□□□□□ -0.09
TOP3B-203ENST00000424393 ANP32CO43423 234 aa14.52□□□□□ -0.09
TOP3B-203ENST00000424393 SIK1P57059 783 aa14.52□□□□□ -0.09
TOP3B-203ENST00000424393 CCDC184Q52MB2 194 aa14.52□□□□□ -0.09
TOP3B-203ENST00000424393 CICQ96RK0 1608 aaPredicted RBP14.52□□□□□ -0.09
TOP3B-203ENST00000424393 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
TOP3B-203ENST00000424393 PDGFDQ9GZP0 370 aaPredicted RBP14.51□□□□□ -0.09
TOP3B-203ENST00000424393 UBR2Q8IWV8 1755 aa14.51□□□□□ -0.09
TOP3B-203ENST00000424393 COL5A3P25940 1745 aaPredicted RBP14.51□□□□□ -0.09
TOP3B-203ENST00000424393 TJP1Q07157 1748 aa14.51□□□□□ -0.09
TOP3B-203ENST00000424393 NEFMP07197 916 aa14.5□□□□□ -0.09
TOP3B-203ENST00000424393 ITPK1Q13572 414 aa14.5□□□□□ -0.09
TOP3B-203ENST00000424393 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
TOP3B-203ENST00000424393 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
TOP3B-203ENST00000424393 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
TOP3B-203ENST00000424393 ADAMTS8Q9UP79 889 aa14.5□□□□□ -0.09
TOP3B-203ENST00000424393 KCPQ6ZWJ8 1503 aa14.5□□□□□ -0.09
TOP3B-203ENST00000424393 MAPK8IP3Q9UPT6 1336 aa14.49□□□□□ -0.09
TOP3B-203ENST00000424393 ATP6V1AP38606 617 aa14.49□□□□□ -0.09
TOP3B-203ENST00000424393 SLC39A6Q13433 755 aa14.49□□□□□ -0.09
TOP3B-203ENST00000424393 NFE2L2Q16236 605 aa14.49□□□□□ -0.09
TOP3B-203ENST00000424393 MCM10Q7L590 875 aa14.49□□□□□ -0.09
TOP3B-203ENST00000424393 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
TOP3B-203ENST00000424393 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
TOP3B-203ENST00000424393 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
TOP3B-203ENST00000424393 PNPLA7Q6ZV29 1317 aa14.48□□□□□ -0.09
TOP3B-203ENST00000424393 HTATSF1O43719 755 aaKnown RBP14.48□□□□□ -0.09
TOP3B-203ENST00000424393 PTCD1O75127 700 aaKnown RBP14.48□□□□□ -0.09
TOP3B-203ENST00000424393 TEFQ10587 303 aa14.48□□□□□ -0.09
TOP3B-203ENST00000424393 DCTN1Q14203 1278 aa14.48□□□□□ -0.09
TOP3B-203ENST00000424393 CCDC146Q8IYE0 955 aa14.48□□□□□ -0.09
TOP3B-203ENST00000424393 RTF1Q92541 710 aaKnown RBP14.47□□□□□ -0.09
TOP3B-203ENST00000424393 TFCP2L1Q9NZI6 479 aa14.47□□□□□ -0.09
TOP3B-203ENST00000424393 CHD4Q14839 1912 aa14.47□□□□□ -0.09
TOP3B-203ENST00000424393 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
TOP3B-203ENST00000424393 FHDC1Q9C0D6 1143 aaPredicted RBP14.46□□□□□ -0.09
TOP3B-203ENST00000424393 HMGB2P26583 209 aaKnown RBP14.45□□□□□ -0.1
TOP3B-203ENST00000424393 TMPOP42166 694 aaKnown RBP14.45□□□□□ -0.1
TOP3B-203ENST00000424393 AMIGO3Q86WK7 504 aa14.45□□□□□ -0.1
TOP3B-203ENST00000424393 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
TOP3B-203ENST00000424393 MYH14Q7Z406 1995 aaKnown RBP14.45□□□□□ -0.1
TOP3B-203ENST00000424393 RIPK4P57078 832 aa14.44□□□□□ -0.1
TOP3B-203ENST00000424393 AK7Q96M32 723 aa14.44□□□□□ -0.1
TOP3B-203ENST00000424393 THUMPD2Q9BTF0 503 aaKnown RBP14.44□□□□□ -0.1
TOP3B-203ENST00000424393 MRS2Q9HD23 443 aa14.44□□□□□ -0.1
TOP3B-203ENST00000424393 KDM3BQ7LBC6 1761 aa14.44□□□□□ -0.1
TOP3B-203ENST00000424393 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
TOP3B-203ENST00000424393 BTBD11A6QL63 1104 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 KCNQ3O43525 872 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 GPR162Q16538 588 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 ZNF790Q6PG37 636 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 COL23A1Q86Y22 540 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-203ENST00000424393 DNAJC10Q8IXB1 793 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
TOP3B-203ENST00000424393 TTC5Q8N0Z6 440 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 SYT17Q9BSW7 474 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 MTFR1LQ9H019 292 aa14.43□□□□□ -0.1
TOP3B-203ENST00000424393 RRP7AQ9Y3A4 280 aaKnown RBP14.43□□□□□ -0.1
TOP3B-203ENST00000424393 CNTNAP4Q9C0A0 1308 aa14.42□□□□□ -0.1
TOP3B-203ENST00000424393 C1QTNF8P60827 252 aa14.42□□□□□ -0.1
TOP3B-203ENST00000424393 PNISRQ8TF01 805 aaKnown RBP14.42□□□□□ -0.1
TOP3B-203ENST00000424393 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
TOP3B-203ENST00000424393 GNPATO15228 680 aa14.41□□□□□ -0.1
TOP3B-203ENST00000424393 PTGER2P43116 358 aa14.41□□□□□ -0.1
TOP3B-203ENST00000424393 RC3H1Q5TC82 1133 aaKnown RBP14.41□□□□□ -0.1
TOP3B-203ENST00000424393 VSIG10Q8N0Z9 540 aa14.41□□□□□ -0.1
TOP3B-203ENST00000424393 HEG1Q9ULI3 1381 aa14.41□□□□□ -0.1
TOP3B-203ENST00000424393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.4□□□□□ -0.1
TOP3B-203ENST00000424393 PHF14O94880 888 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 SSFA2P28290 1259 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 CRKLP46109 303 aaKnown RBP14.4□□□□□ -0.1
TOP3B-203ENST00000424393 TAF7Q15545 349 aaPredicted RBP14.4□□□□□ -0.1
TOP3B-203ENST00000424393 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 SLC16A10Q8TF71 515 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 ARXQ96QS3 562 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
TOP3B-203ENST00000424393 MSH5O43196 834 aa14.39□□□□□ -0.11
TOP3B-203ENST00000424393 CYP19A1P11511 503 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms