RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 VEGFBP49765 207 aa9.12□□□□□ -0.95
SDCBP-203ENST00000424270 RASSF7Q02833 373 aa9.12□□□□□ -0.95
SDCBP-203ENST00000424270 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
SDCBP-203ENST00000424270 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-203ENST00000424270 RAPGEF4Q8WZA2 1011 aa9.12□□□□□ -0.95
SDCBP-203ENST00000424270 DCAF5Q96JK2 942 aa9.12□□□□□ -0.95
SDCBP-203ENST00000424270 ZC3H4Q9UPT8 1303 aaKnown RBP9.11□□□□□ -0.95
SDCBP-203ENST00000424270 HSPA8P11142 646 aaKnown RBP9.11□□□□□ -0.95
SDCBP-203ENST00000424270 LMNB1P20700 586 aa9.11□□□□□ -0.95
SDCBP-203ENST00000424270 RGS19P49795 217 aa9.11□□□□□ -0.95
SDCBP-203ENST00000424270 MAP2K1Q02750 393 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-203ENST00000424270 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
SDCBP-203ENST00000424270 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
SDCBP-203ENST00000424270 ZNF219Q9P2Y4 722 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-203ENST00000424270 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-203ENST00000424270 RFC4P35249 363 aa9.1□□□□□ -0.95
SDCBP-203ENST00000424270 AMPHP49418 695 aa9.1□□□□□ -0.95
SDCBP-203ENST00000424270 GRM1Q13255 1194 aa9.1□□□□□ -0.95
SDCBP-203ENST00000424270 NME9Q86XW9 330 aa9.1□□□□□ -0.95
SDCBP-203ENST00000424270 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
SDCBP-203ENST00000424270 RTCBQ9Y3I0 505 aaKnown RBP9.1□□□□□ -0.95
SDCBP-203ENST00000424270 TMEM88BA6NKF7 163 aa9.09□□□□□ -0.95
SDCBP-203ENST00000424270 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
SDCBP-203ENST00000424270 CHRNA5P30532 468 aa9.09□□□□□ -0.95
SDCBP-203ENST00000424270 ATP6V1AP38606 617 aa9.09□□□□□ -0.95
SDCBP-203ENST00000424270 LTN1O94822 1766 aa9.09□□□□□ -0.95
SDCBP-203ENST00000424270 PCDH11XQ9BZA7 1347 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 PCDH11YQ9BZA8 1340 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 DSG3P32926 999 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 SIK1P57059 783 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 USHBP1Q8N6Y0 703 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 IP6K1Q92551 441 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 ABT1Q9ULW3 272 aaKnown RBP9.08□□□□□ -0.96
SDCBP-203ENST00000424270 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
SDCBP-203ENST00000424270 MEGF6O75095 1541 aa9.07□□□□□ -0.96
SDCBP-203ENST00000424270 KCNA3P22001 575 aa9.07□□□□□ -0.96
SDCBP-203ENST00000424270 NBPF1Q3BBV0 1214 aa9.07□□□□□ -0.96
SDCBP-203ENST00000424270 TMC1Q8TDI8 760 aa9.07□□□□□ -0.96
SDCBP-203ENST00000424270 TOGARAM1Q9Y4F4 1720 aa9.07□□□□□ -0.96
SDCBP-203ENST00000424270 TAF1LQ8IZX4 1826 aa9.07□□□□□ -0.96
SDCBP-203ENST00000424270 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
SDCBP-203ENST00000424270 UBR3Q6ZT12 1888 aa9.06□□□□□ -0.96
SDCBP-203ENST00000424270 KIAA1551Q9HCM1 1747 aa9.06□□□□□ -0.96
SDCBP-203ENST00000424270 DEFB115Q30KQ5 88 aa9.06□□□□□ -0.96
SDCBP-203ENST00000424270 EAPPQ56P03 285 aaPredicted RBP9.06□□□□□ -0.96
SDCBP-203ENST00000424270 HDGFL2Q7Z4V5 671 aaPredicted RBP9.06□□□□□ -0.96
SDCBP-203ENST00000424270 TMOD3Q9NYL9 352 aa9.06□□□□□ -0.96
SDCBP-203ENST00000424270 KIF13BQ9NQT8 1826 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 FAM208AQ9UK61 1670 aaKnown RBP9.05□□□□□ -0.96
SDCBP-203ENST00000424270 USP31Q70CQ4 1352 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 POTEIP0CG38 1075 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 POTEJP0CG39 1038 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 MCOLN1Q9GZU1 580 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 ARFGEF1Q9Y6D6 1849 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 C4AP0C0L4 1744 aa9.05□□□□□ -0.96
SDCBP-203ENST00000424270 SMG6Q86US8 1419 aaKnown RBP9.05□□□□□ -0.96
SDCBP-203ENST00000424270 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
SDCBP-203ENST00000424270 GYS1P13807 737 aa9.04□□□□□ -0.96
SDCBP-203ENST00000424270 ITPK1Q13572 414 aa9.04□□□□□ -0.96
SDCBP-203ENST00000424270 DGKZQ13574 1117 aa9.04□□□□□ -0.96
SDCBP-203ENST00000424270 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
SDCBP-203ENST00000424270 PRPF38BQ5VTL8 546 aaKnown RBP9.04□□□□□ -0.96
SDCBP-203ENST00000424270 PIGBQ92521 554 aa9.04□□□□□ -0.96
SDCBP-203ENST00000424270 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
SDCBP-203ENST00000424270 RBM42Q9BTD8 480 aaKnown RBP9.04□□□□□ -0.96
SDCBP-203ENST00000424270 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
SDCBP-203ENST00000424270 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
SDCBP-203ENST00000424270 HOXC9P31274 260 aa9.03□□□□□ -0.96
SDCBP-203ENST00000424270 SOX10P56693 466 aa9.03□□□□□ -0.96
SDCBP-203ENST00000424270 LDHDQ86WU2 507 aa9.03□□□□□ -0.96
SDCBP-203ENST00000424270 POTECB2RU33 542 aa9.02□□□□□ -0.97
SDCBP-203ENST00000424270 NBPF6Q5VWK0 638 aa9.02□□□□□ -0.97
SDCBP-203ENST00000424270 COG3Q96JB2 828 aa9.02□□□□□ -0.97
SDCBP-203ENST00000424270 NBPF4Q96M43 638 aa9.02□□□□□ -0.97
SDCBP-203ENST00000424270 TIAM2Q8IVF5 1701 aa9.02□□□□□ -0.97
SDCBP-203ENST00000424270 DDNO94850 711 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-203ENST00000424270 ECE1P42892 770 aa9.01□□□□□ -0.97
SDCBP-203ENST00000424270 TTLL6Q8N841 843 aa9.01□□□□□ -0.97
SDCBP-203ENST00000424270 ASAP1Q9ULH1 1129 aa9.01□□□□□ -0.97
SDCBP-203ENST00000424270 MAP3K19Q56UN5 1328 aa9.01□□□□□ -0.97
SDCBP-203ENST00000424270 BRCA1P38398 1863 aaKnown RBP9□□□□□ -0.97
SDCBP-203ENST00000424270 KDM6AO15550 1401 aaPredicted RBP9□□□□□ -0.97
SDCBP-203ENST00000424270 RASSF10A6NK89 507 aa9□□□□□ -0.97
SDCBP-203ENST00000424270 GPR101Q96P66 508 aaPredicted RBP9□□□□□ -0.97
SDCBP-203ENST00000424270 TERF2IPQ9NYB0 399 aa9□□□□□ -0.97
SDCBP-203ENST00000424270 PASKQ96RG2 1323 aa9□□□□□ -0.97
SDCBP-203ENST00000424270 CYP27B1O15528 508 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 FKBP8Q14318 412 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 C2CD5Q86YS7 1000 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 GCC1Q96CN9 775 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 CAPNS2Q96L46 248 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 SRP68Q9UHB9 627 aaKnown RBP8.99□□□□□ -0.97
SDCBP-203ENST00000424270 SPG7Q9UQ90 795 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 CD163L1Q9NR16 1453 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 SBF1O95248 1867 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 SBNO2Q9Y2G9 1366 aa8.99□□□□□ -0.97
SDCBP-203ENST00000424270 H0YIN7 160 aa8.98□□□□□ -0.97
SDCBP-203ENST00000424270 ZPR1O75312 459 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms