RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 SLC4A9Q96Q91 983 aa26.4■■□□□ 1.82
FBXO28-202ENST00000424254 QSER1Q2KHR3 1735 aa26.4■■□□□ 1.82
FBXO28-202ENST00000424254 TUBGCP6Q96RT7 1819 aa26.4■■□□□ 1.82
FBXO28-202ENST00000424254 AK7Q96M32 723 aa26.39■■□□□ 1.82
FBXO28-202ENST00000424254 RNMTO43148 476 aaKnown RBP26.39■■□□□ 1.81
FBXO28-202ENST00000424254 MSH5O43196 834 aa26.39■■□□□ 1.81
FBXO28-202ENST00000424254 RBM42Q9BTD8 480 aaKnown RBP26.39■■□□□ 1.81
FBXO28-202ENST00000424254 C4BP0C0L5 1744 aa26.38■■□□□ 1.81
FBXO28-202ENST00000424254 DDX10Q13206 875 aaKnown RBP26.38■■□□□ 1.81
FBXO28-202ENST00000424254 SMIM5Q71RC9 77 aa26.38■■□□□ 1.81
FBXO28-202ENST00000424254 NUDCQ9Y266 331 aa26.38■■□□□ 1.81
FBXO28-202ENST00000424254 ARXQ96QS3 562 aa26.37■■□□□ 1.81
FBXO28-202ENST00000424254 RSPH6AQ9H0K4 717 aa26.37■■□□□ 1.81
FBXO28-202ENST00000424254 SLC52A2Q9HAB3 445 aa26.37■■□□□ 1.81
FBXO28-202ENST00000424254 PRKAR2BP31323 418 aa26.36■■□□□ 1.81
FBXO28-202ENST00000424254 TAF1LQ8IZX4 1826 aa26.35■■□□□ 1.81
FBXO28-202ENST00000424254 U2AF1L5P0DN76 240 aaPredicted RBP26.35■■□□□ 1.81
FBXO28-202ENST00000424254 U2AF1Q01081 240 aaKnown RBP eCLIP26.35■■□□□ 1.81
FBXO28-202ENST00000424254 FLAD1Q8NFF5 587 aa26.35■■□□□ 1.81
FBXO28-202ENST00000424254 PHACTR3Q96KR7 559 aa26.35■■□□□ 1.81
FBXO28-202ENST00000424254 FHDC1Q9C0D6 1143 aaPredicted RBP26.35■■□□□ 1.81
FBXO28-202ENST00000424254 MRC1P22897 1456 aa26.34■■□□□ 1.81
FBXO28-202ENST00000424254 PTCD1O75127 700 aaKnown RBP26.34■■□□□ 1.81
FBXO28-202ENST00000424254 PHF14O94880 888 aa26.34■■□□□ 1.81
FBXO28-202ENST00000424254 GAS2L2Q8NHY3 880 aa26.34■■□□□ 1.81
FBXO28-202ENST00000424254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.33■■□□□ 1.81
FBXO28-202ENST00000424254 GNPATO15228 680 aa26.32■■□□□ 1.8
FBXO28-202ENST00000424254 POLD1P28340 1107 aa26.32■■□□□ 1.8
FBXO28-202ENST00000424254 MSL1Q68DK7 614 aa26.32■■□□□ 1.8
FBXO28-202ENST00000424254 MAP3K5Q99683 1374 aa26.31■■□□□ 1.8
FBXO28-202ENST00000424254 SSFA2P28290 1259 aa26.31■■□□□ 1.8
FBXO28-202ENST00000424254 SYT17Q9BSW7 474 aa26.31■■□□□ 1.8
FBXO28-202ENST00000424254 SCN11AQ9UI33 1791 aa26.3■■□□□ 1.8
FBXO28-202ENST00000424254 GNAT3A8MTJ3 354 aa26.29■■□□□ 1.8
FBXO28-202ENST00000424254 ADAMTS7Q9UKP4 1686 aa26.29■■□□□ 1.8
FBXO28-202ENST00000424254 FCHSD2O94868 740 aa26.28■■□□□ 1.8
FBXO28-202ENST00000424254 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
FBXO28-202ENST00000424254 IL17REQ8NFR9 667 aa26.28■■□□□ 1.8
FBXO28-202ENST00000424254 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
FBXO28-202ENST00000424254 RALBP1Q15311 655 aa26.27■■□□□ 1.8
FBXO28-202ENST00000424254 CNTNAP4Q9C0A0 1308 aa26.26■■□□□ 1.79
FBXO28-202ENST00000424254 ZNF831Q5JPB2 1677 aa26.26■■□□□ 1.79
FBXO28-202ENST00000424254 COL24A1Q17RW2 1714 aa26.26■■□□□ 1.79
FBXO28-202ENST00000424254 RC3H1Q5TC82 1133 aaKnown RBP26.25■■□□□ 1.79
FBXO28-202ENST00000424254 UBR3Q6ZT12 1888 aa26.25■■□□□ 1.79
FBXO28-202ENST00000424254 RTCBQ9Y3I0 505 aaKnown RBP26.24■■□□□ 1.79
FBXO28-202ENST00000424254 KLHL34Q8N239 644 aa26.22■■□□□ 1.79
FBXO28-202ENST00000424254 CEMIPQ8WUJ3 1361 aa26.22■■□□□ 1.79
FBXO28-202ENST00000424254 CRKLP46109 303 aaKnown RBP26.21■■□□□ 1.79
FBXO28-202ENST00000424254 TEFQ10587 303 aa26.21■■□□□ 1.79
FBXO28-202ENST00000424254 DNAJC10Q8IXB1 793 aa26.21■■□□□ 1.79
FBXO28-202ENST00000424254 KCPQ6ZWJ8 1503 aa26.21■■□□□ 1.79
FBXO28-202ENST00000424254 RPS6KA4O75676 772 aa26.2■■□□□ 1.79
FBXO28-202ENST00000424254 TRAPPC3LQ5T215 181 aa26.2■■□□□ 1.79
FBXO28-202ENST00000424254 COL5A3P25940 1745 aaPredicted RBP26.19■■□□□ 1.78
FBXO28-202ENST00000424254 ARHGEF1Q92888 912 aaKnown RBP26.18■■□□□ 1.78
FBXO28-202ENST00000424254 ADRA2BP18089 450 aa26.17■■□□□ 1.78
FBXO28-202ENST00000424254 TJP1Q07157 1748 aa26.17■■□□□ 1.78
FBXO28-202ENST00000424254 INTS5Q6P9B9 1019 aaKnown RBP26.17■■□□□ 1.78
FBXO28-202ENST00000424254 CICQ96RK0 1608 aaPredicted RBP26.17■■□□□ 1.78
FBXO28-202ENST00000424254 MYBBP1AQ9BQG0 1328 aaKnown RBP26.17■■□□□ 1.78
FBXO28-202ENST00000424254 MCM10Q7L590 875 aa26.16■■□□□ 1.78
FBXO28-202ENST00000424254 TTC5Q8N0Z6 440 aa26.16■■□□□ 1.78
FBXO28-202ENST00000424254 PLEKHF1Q96S99 279 aa26.16■■□□□ 1.78
FBXO28-202ENST00000424254 DCAF8L1A6NGE4 600 aa26.15■■□□□ 1.78
FBXO28-202ENST00000424254 CYP19A1P11511 503 aaPredicted RBP26.15■■□□□ 1.78
FBXO28-202ENST00000424254 ZNF790Q6PG37 636 aa26.15■■□□□ 1.78
FBXO28-202ENST00000424254 NLGN2Q8NFZ4 835 aa26.15■■□□□ 1.78
FBXO28-202ENST00000424254 VSIG10Q8N0Z9 540 aa26.14■■□□□ 1.78
FBXO28-202ENST00000424254 RTF1Q92541 710 aaKnown RBP26.14■■□□□ 1.78
FBXO28-202ENST00000424254 ZNF496Q96IT1 587 aaPredicted RBP26.14■■□□□ 1.78
FBXO28-202ENST00000424254 DCTN1Q14203 1278 aa26.14■■□□□ 1.77
FBXO28-202ENST00000424254 CCDC87Q9NVE4 849 aa26.14■■□□□ 1.77
FBXO28-202ENST00000424254 RFC4P35249 363 aa26.13■■□□□ 1.77
FBXO28-202ENST00000424254 VIRMAQ69YN4 1812 aaKnown RBP26.11■■□□□ 1.77
FBXO28-202ENST00000424254 MYH14Q7Z406 1995 aaKnown RBP26.11■■□□□ 1.77
FBXO28-202ENST00000424254 BTBD11A6QL63 1104 aa26.11■■□□□ 1.77
FBXO28-202ENST00000424254 KCNQ3O43525 872 aa26.11■■□□□ 1.77
FBXO28-202ENST00000424254 HTATSF1O43719 755 aaKnown RBP26.11■■□□□ 1.77
FBXO28-202ENST00000424254 NEFMP07197 916 aa26.11■■□□□ 1.77
FBXO28-202ENST00000424254 GYS1P13807 737 aa26.11■■□□□ 1.77
FBXO28-202ENST00000424254 MMP10P09238 476 aa26.1■■□□□ 1.77
FBXO28-202ENST00000424254 PRKRIP1Q9H875 184 aaPredicted RBP26.1■■□□□ 1.77
FBXO28-202ENST00000424254 ZBTB1Q9Y2K1 713 aa26.1■■□□□ 1.77
FBXO28-202ENST00000424254 SOS1Q07889 1333 aaPredicted RBP26.09■■□□□ 1.77
FBXO28-202ENST00000424254 HEG1Q9ULI3 1381 aa26.09■■□□□ 1.77
FBXO28-202ENST00000424254 NLGN1Q8N2Q7 840 aa26.09■■□□□ 1.77
FBXO28-202ENST00000424254 SRP68Q9UHB9 627 aaKnown RBP26.09■■□□□ 1.77
FBXO28-202ENST00000424254 CD2APQ9Y5K6 639 aa26.09■■□□□ 1.77
FBXO28-202ENST00000424254 UBR2Q8IWV8 1755 aa26.09■■□□□ 1.77
FBXO28-202ENST00000424254 SIPA1L3O60292 1781 aaPredicted RBP26.08■■□□□ 1.77
FBXO28-202ENST00000424254 USP42Q9H9J4 1324 aaKnown RBP26.07■■□□□ 1.76
FBXO28-202ENST00000424254 NFE2L2Q16236 605 aa26.07■■□□□ 1.76
FBXO28-202ENST00000424254 FMNL2Q96PY5 1086 aa26.07■■□□□ 1.76
FBXO28-202ENST00000424254 PNNQ9H307 717 aaKnown RBP26.07■■□□□ 1.76
FBXO28-202ENST00000424254 MAPK8IP3Q9UPT6 1336 aa26.06■■□□□ 1.76
FBXO28-202ENST00000424254 STARD3NLO95772 234 aa26.05■■□□□ 1.76
FBXO28-202ENST00000424254 GPR162Q16538 588 aa26.04■■□□□ 1.76
FBXO28-202ENST00000424254 C4AP0C0L4 1744 aa26.03■■□□□ 1.76
FBXO28-202ENST00000424254 CANXP27824 592 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms