RNA–Protein interactions for RNA: ENST00000423956.5

RAD50-203, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 2,915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-203ENST00000423956 PLCD3Q8N3E9 789 aa5.77□□□□□ -1.49
RAD50-203ENST00000423956 ACSBG1Q96GR2 724 aa5.77□□□□□ -1.49
RAD50-203ENST00000423956 MAP2P11137 1827 aaKnown RBP5.77□□□□□ -1.49
RAD50-203ENST00000423956 PCDH11XQ9BZA7 1347 aa5.77□□□□□ -1.49
RAD50-203ENST00000423956 PCDH11YQ9BZA8 1340 aa5.77□□□□□ -1.49
RAD50-203ENST00000423956 CD44P16070 742 aaKnown RBP5.77□□□□□ -1.49
RAD50-203ENST00000423956 ZCRB1Q8TBF4 217 aaKnown RBP5.77□□□□□ -1.49
RAD50-203ENST00000423956 TERF2IPQ9NYB0 399 aa5.76□□□□□ -1.49
RAD50-203ENST00000423956 EVX2Q03828 476 aa5.76□□□□□ -1.49
RAD50-203ENST00000423956 C16orf71Q8IYS4 520 aaPredicted RBP5.76□□□□□ -1.49
RAD50-203ENST00000423956 TNS4Q8IZW8 715 aa5.76□□□□□ -1.49
RAD50-203ENST00000423956 KLHL34Q8N239 644 aa5.76□□□□□ -1.49
RAD50-203ENST00000423956 PALLDQ8WX93 1383 aa5.76□□□□□ -1.49
RAD50-203ENST00000423956 C4AP0C0L4 1744 aa5.75□□□□□ -1.49
RAD50-203ENST00000423956 ZBTB7CA1YPR0 619 aa5.75□□□□□ -1.49
RAD50-203ENST00000423956 SMC1BQ8NDV3 1235 aa5.75□□□□□ -1.49
RAD50-203ENST00000423956 PRIM1P49642 420 aaKnown RBP5.75□□□□□ -1.49
RAD50-203ENST00000423956 NKX1-1Q15270 411 aaPredicted RBP5.75□□□□□ -1.49
RAD50-203ENST00000423956 AK7Q96M32 723 aa5.75□□□□□ -1.49
RAD50-203ENST00000423956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.75□□□□□ -1.495e-7■■■■□ 26.2
RAD50-203ENST00000423956 KDM6AO15550 1401 aaPredicted RBP5.75□□□□□ -1.49
RAD50-203ENST00000423956 ITGB4P16144 1822 aa5.75□□□□□ -1.49
RAD50-203ENST00000423956 MEGF6O75095 1541 aa5.74□□□□□ -1.49
RAD50-203ENST00000423956 NLGN1Q8N2Q7 840 aa5.74□□□□□ -1.49
RAD50-203ENST00000423956 PRDM10Q9NQV6 1147 aa5.74□□□□□ -1.49
RAD50-203ENST00000423956 ANKRD26Q9UPS8 1709 aa5.74□□□□□ -1.49
RAD50-203ENST00000423956 RC3H1Q5TC82 1133 aaKnown RBP5.74□□□□□ -1.49
RAD50-203ENST00000423956 PLSCR2Q9NRY7 297 aa5.74□□□□□ -1.49
RAD50-203ENST00000423956 CCDC87Q9NVE4 849 aa5.74□□□□□ -1.49
RAD50-203ENST00000423956 PDZRN3Q9UPQ7 1066 aa5.73□□□□□ -1.49
RAD50-203ENST00000423956 INSRP06213 1382 aa5.73□□□□□ -1.49
RAD50-203ENST00000423956 COL5A3P25940 1745 aaPredicted RBP5.73□□□□□ -1.49
RAD50-203ENST00000423956 TATP17735 454 aaPredicted RBP5.73□□□□□ -1.49
RAD50-203ENST00000423956 NBPF1Q3BBV0 1214 aa5.73□□□□□ -1.49
RAD50-203ENST00000423956 RAPGEF4Q8WZA2 1011 aa5.73□□□□□ -1.49
RAD50-203ENST00000423956 DLEC1Q9Y238 1755 aa5.72□□□□□ -1.49
RAD50-203ENST00000423956 ROCK2O75116 1388 aaKnown RBP5.72□□□□□ -1.49
RAD50-203ENST00000423956 HOXC9P31274 260 aa5.72□□□□□ -1.49
RAD50-203ENST00000423956 CNTNAP4Q9C0A0 1308 aa5.72□□□□□ -1.49
RAD50-203ENST00000423956 TONSLQ96HA7 1378 aa5.72□□□□□ -1.49
RAD50-203ENST00000423956 DDX54Q8TDD1 881 aaKnown RBP5.72□□□□□ -1.49
RAD50-203ENST00000423956 DCAF5Q96JK2 942 aa5.72□□□□□ -1.49
RAD50-203ENST00000423956 IFNLR1Q8IU57 520 aaPredicted RBP5.71□□□□□ -1.49
RAD50-203ENST00000423956 COG3Q96JB2 828 aa5.71□□□□□ -1.49
RAD50-203ENST00000423956 FLT4P35916 1363 aa5.71□□□□□ -1.5
RAD50-203ENST00000423956 KDRP35968 1356 aa5.71□□□□□ -1.5
RAD50-203ENST00000423956 CHRM1P11229 460 aaPredicted RBP5.71□□□□□ -1.5
RAD50-203ENST00000423956 WWC3Q9ULE0 1092 aa5.71□□□□□ -1.5
RAD50-203ENST00000423956 A0A1W2PP64 1363 aa5.71□□□□□ -1.5
RAD50-203ENST00000423956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.71□□□□□ -1.5
RAD50-203ENST00000423956 SBF1O95248 1867 aa5.71□□□□□ -1.5
RAD50-203ENST00000423956 COL13A1Q5TAT6 717 aaPredicted RBP5.71□□□□□ -1.5
RAD50-203ENST00000423956 SPOCK2Q92563 424 aa5.71□□□□□ -1.5
RAD50-203ENST00000423956 RGPD2P0DJD1 1756 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 KIF20BQ96Q89 1820 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 NRXN2Q9P2S2 1712 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 NME9Q86XW9 330 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 RASEFQ8IZ41 740 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 SYTL4Q96C24 671 aaPredicted RBP5.7□□□□□ -1.5
RAD50-203ENST00000423956 SPG7Q9UQ90 795 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 N4BP2Q86UW6 1770 aaPredicted RBP5.7□□□□□ -1.5
RAD50-203ENST00000423956 GABBR2O75899 941 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 AMPHP49418 695 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 PIM2Q9P1W9 311 aa5.7□□□□□ -1.5
RAD50-203ENST00000423956 THSD7BQ9C0I4 1608 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 HSP90AB1P08238 724 aaKnown RBP5.69□□□□□ -1.5
RAD50-203ENST00000423956 HSPA1AP0DMV8 641 aaKnown RBP5.69□□□□□ -1.5
RAD50-203ENST00000423956 HSPA1BP0DMV9 641 aaKnown RBP5.69□□□□□ -1.5
RAD50-203ENST00000423956 GSE1Q14687 1217 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 LOC102724428A0A0B4J2F2 783 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 SIK1P57059 783 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 TMF1P82094 1093 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 MSL1Q68DK7 614 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 DICER1Q9UPY3 1922 aaKnown RBP5.69□□□□□ -1.5
RAD50-203ENST00000423956 TIAM2Q8IVF5 1701 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 KCPQ6ZWJ8 1503 aa5.69□□□□□ -1.5
RAD50-203ENST00000423956 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 DALRD3Q5D0E6 543 aaKnown RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 NMRK2Q9NPI5 230 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 RTCBQ9Y3I0 505 aaKnown RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 PARP3Q9Y6F1 533 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 FCHSD2O94868 740 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 MMP10P09238 476 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 TRAPPC3LQ5T215 181 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 PPARGC1BQ86YN6 1023 aaKnown RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 LTBP3Q9NS15 1303 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 VIRMAQ69YN4 1812 aaKnown RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 ERVV-2B6SEH9 535 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 RPS6KA4O75676 772 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 CTCFP49711 727 aaPredicted RBP5.68□□□□□ -1.5
RAD50-203ENST00000423956 RGS19P49795 217 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 ARHGAP27Q6ZUM4 889 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 FAM212AQ96EL1 285 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 BCS1LQ9Y276 419 aa5.68□□□□□ -1.5
RAD50-203ENST00000423956 GLTPD2A6NH11 291 aa5.67□□□□□ -1.5
RAD50-203ENST00000423956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.67□□□□□ -1.52e-6■■□□□ 12.4
RAD50-203ENST00000423956 ARFGEF2Q9Y6D5 1785 aa5.67□□□□□ -1.5
RAD50-203ENST00000423956 SCN4AP35499 1836 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms