RNA–Protein interactions for RNA: ENST00000423927.2

KNTC1-203, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-203ENST00000423927 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
KNTC1-203ENST00000423927 PHF14O94880 888 aa11.86□□□□□ -0.51
KNTC1-203ENST00000423927 CTCFP49711 727 aaPredicted RBP11.86□□□□□ -0.51
KNTC1-203ENST00000423927 NSD2O96028 1365 aa11.86□□□□□ -0.51
KNTC1-203ENST00000423927 CCDC88AQ3V6T2 1871 aa11.86□□□□□ -0.51
KNTC1-203ENST00000423927 PCNTO95613 3336 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 PXDNLA1KZ92 1463 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 A0A0G2JLW4 131 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 FOXN1O15353 648 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
KNTC1-203ENST00000423927 CLCN6P51797 869 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 RNF181Q9P0P0 153 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 KIAA1551Q9HCM1 1747 aa11.85□□□□□ -0.51
KNTC1-203ENST00000423927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
KNTC1-203ENST00000423927 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
KNTC1-203ENST00000423927 ABHD8Q96I13 439 aa11.84□□□□□ -0.51
KNTC1-203ENST00000423927 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
KNTC1-203ENST00000423927 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
KNTC1-203ENST00000423927 SSFA2P28290 1259 aa11.82□□□□□ -0.52
KNTC1-203ENST00000423927 MKRN1Q9UHC7 482 aaKnown RBP11.82□□□□□ -0.52
KNTC1-203ENST00000423927 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
KNTC1-203ENST00000423927 ITGB4P16144 1822 aa11.81□□□□□ -0.52
KNTC1-203ENST00000423927 MMP10P09238 476 aa11.81□□□□□ -0.52
KNTC1-203ENST00000423927 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
KNTC1-203ENST00000423927 PALLDQ8WX93 1383 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 RGPD2P0DJD1 1756 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 CCDC85CA6NKD9 419 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 DPEP1P16444 411 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 SMARCC1Q92922 1105 aaPredicted RBP11.8□□□□□ -0.52
KNTC1-203ENST00000423927 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
KNTC1-203ENST00000423927 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
KNTC1-203ENST00000423927 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
KNTC1-203ENST00000423927 RGS19P49795 217 aa11.79□□□□□ -0.52
KNTC1-203ENST00000423927 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
KNTC1-203ENST00000423927 PDE4DIPQ5VU43 2346 aa11.78□□□□□ -0.52
KNTC1-203ENST00000423927 LBX1P52954 281 aa11.78□□□□□ -0.52
KNTC1-203ENST00000423927 VIRMAQ69YN4 1812 aaKnown RBP11.78□□□□□ -0.52
KNTC1-203ENST00000423927 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
KNTC1-203ENST00000423927 DALRD3Q5D0E6 543 aaKnown RBP11.77□□□□□ -0.53
KNTC1-203ENST00000423927 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.53
KNTC1-203ENST00000423927 AMIGO3Q86WK7 504 aa11.77□□□□□ -0.53
KNTC1-203ENST00000423927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
KNTC1-203ENST00000423927 NLGN1Q8N2Q7 840 aa11.77□□□□□ -0.53
KNTC1-203ENST00000423927 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
KNTC1-203ENST00000423927 MON2Q7Z3U7 1717 aa11.77□□□□□ -0.53
KNTC1-203ENST00000423927 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
KNTC1-203ENST00000423927 TMF1P82094 1093 aa11.76□□□□□ -0.53
KNTC1-203ENST00000423927 IP6K1Q92551 441 aa11.76□□□□□ -0.53
KNTC1-203ENST00000423927 DCAF5Q96JK2 942 aa11.76□□□□□ -0.53
KNTC1-203ENST00000423927 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
KNTC1-203ENST00000423927 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
KNTC1-203ENST00000423927 GNPATO15228 680 aa11.75□□□□□ -0.53
KNTC1-203ENST00000423927 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
KNTC1-203ENST00000423927 C4AP0C0L4 1744 aa11.74□□□□□ -0.53
KNTC1-203ENST00000423927 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
KNTC1-203ENST00000423927 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
KNTC1-203ENST00000423927 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
KNTC1-203ENST00000423927 MAP2P11137 1827 aaKnown RBP11.73□□□□□ -0.53
KNTC1-203ENST00000423927 NBPF1Q3BBV0 1214 aa11.73□□□□□ -0.53
KNTC1-203ENST00000423927 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
KNTC1-203ENST00000423927 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
KNTC1-203ENST00000423927 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
KNTC1-203ENST00000423927 KCNA3P22001 575 aa11.72□□□□□ -0.53
KNTC1-203ENST00000423927 TRAPPC3LQ5T215 181 aa11.72□□□□□ -0.53
KNTC1-203ENST00000423927 NME9Q86XW9 330 aa11.72□□□□□ -0.53
KNTC1-203ENST00000423927 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
KNTC1-203ENST00000423927 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
KNTC1-203ENST00000423927 PCDH11XQ9BZA7 1347 aa11.71□□□□□ -0.53
KNTC1-203ENST00000423927 PCDH11YQ9BZA8 1340 aa11.71□□□□□ -0.53
KNTC1-203ENST00000423927 LOC102724428A0A0B4J2F2 783 aa11.71□□□□□ -0.53
KNTC1-203ENST00000423927 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
KNTC1-203ENST00000423927 LMNB1P20700 586 aa11.71□□□□□ -0.53
KNTC1-203ENST00000423927 SIK1P57059 783 aa11.71□□□□□ -0.53
KNTC1-203ENST00000423927 LINC00116Q8NCU8 138 aa11.71□□□□□ -0.53
KNTC1-203ENST00000423927 MEGF6O75095 1541 aa11.7□□□□□ -0.54
KNTC1-203ENST00000423927 HSPA8P11142 646 aaKnown RBP11.7□□□□□ -0.54
KNTC1-203ENST00000423927 AMPHP49418 695 aa11.7□□□□□ -0.54
KNTC1-203ENST00000423927 VEGFBP49765 207 aa11.7□□□□□ -0.54
KNTC1-203ENST00000423927 MAP2K1Q02750 393 aaPredicted RBP11.7□□□□□ -0.54
KNTC1-203ENST00000423927 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
KNTC1-203ENST00000423927 ATP6V1AP38606 617 aa11.69□□□□□ -0.54
KNTC1-203ENST00000423927 RFC4P35249 363 aa11.68□□□□□ -0.54
KNTC1-203ENST00000423927 RASSF7Q02833 373 aa11.68□□□□□ -0.54
KNTC1-203ENST00000423927 TMEM88BA6NKF7 163 aa11.67□□□□□ -0.54
KNTC1-203ENST00000423927 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
KNTC1-203ENST00000423927 PIGBQ92521 554 aa11.67□□□□□ -0.54
KNTC1-203ENST00000423927 BEGAINQ9BUH8 593 aa11.67□□□□□ -0.54
KNTC1-203ENST00000423927 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
KNTC1-203ENST00000423927 POTECB2RU33 542 aa11.66□□□□□ -0.54
KNTC1-203ENST00000423927 GYS1P13807 737 aa11.66□□□□□ -0.54
KNTC1-203ENST00000423927 HOXC9P31274 260 aa11.66□□□□□ -0.54
KNTC1-203ENST00000423927 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
KNTC1-203ENST00000423927 KDM6AO15550 1401 aaPredicted RBP11.66□□□□□ -0.54
KNTC1-203ENST00000423927 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
KNTC1-203ENST00000423927 CHRNA5P30532 468 aa11.65□□□□□ -0.54
KNTC1-203ENST00000423927 DEFB115Q30KQ5 88 aa11.65□□□□□ -0.54
KNTC1-203ENST00000423927 ARHGEF1Q92888 912 aaKnown RBP11.65□□□□□ -0.54
KNTC1-203ENST00000423927 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms