RNA–Protein interactions for RNA: ENST00000423616.1

RHBDD1-204, Transcript of rhomboid domain containing 1, humanhuman

TSL 5

Gene RHBDD1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-204ENST00000423616 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
RHBDD1-204ENST00000423616 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
RHBDD1-204ENST00000423616 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
RHBDD1-204ENST00000423616 TIAM2Q8IVF5 1701 aa13.63□□□□□ -0.23
RHBDD1-204ENST00000423616 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
RHBDD1-204ENST00000423616 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
RHBDD1-204ENST00000423616 GLTPD2A6NH11 291 aa13.62□□□□□ -0.23
RHBDD1-204ENST00000423616 TMF1P82094 1093 aa13.62□□□□□ -0.23
RHBDD1-204ENST00000423616 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
RHBDD1-204ENST00000423616 SMG6Q86US8 1419 aaKnown RBP13.62□□□□□ -0.23
RHBDD1-204ENST00000423616 RTL1A6NKG5 1358 aa13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 CNTNAP1P78357 1384 aa13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 LOC102724428A0A0B4J2F2 783 aa13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 RGS19P49795 217 aa13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 SIK1P57059 783 aa13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 HDGFL2Q7Z4V5 671 aaPredicted RBP13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 MKRN1Q9UHC7 482 aaKnown RBP13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
RHBDD1-204ENST00000423616 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
RHBDD1-204ENST00000423616 HOXC9P31274 260 aa13.6□□□□□ -0.23
RHBDD1-204ENST00000423616 SMIM5Q71RC9 77 aa13.6□□□□□ -0.23
RHBDD1-204ENST00000423616 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
RHBDD1-204ENST00000423616 KCNA3P22001 575 aa13.59□□□□□ -0.23
RHBDD1-204ENST00000423616 AMPHP49418 695 aa13.59□□□□□ -0.23
RHBDD1-204ENST00000423616 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
RHBDD1-204ENST00000423616 LMNB1P20700 586 aa13.58□□□□□ -0.24
RHBDD1-204ENST00000423616 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
RHBDD1-204ENST00000423616 RTCBQ9Y3I0 505 aaKnown RBP13.58□□□□□ -0.24
RHBDD1-204ENST00000423616 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
RHBDD1-204ENST00000423616 ZNF831Q5JPB2 1677 aa13.57□□□□□ -0.24
RHBDD1-204ENST00000423616 LBX1P52954 281 aa13.57□□□□□ -0.24
RHBDD1-204ENST00000423616 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
RHBDD1-204ENST00000423616 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
RHBDD1-204ENST00000423616 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
RHBDD1-204ENST00000423616 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
RHBDD1-204ENST00000423616 DPY19L2Q6NUT2 758 aa13.55□□□□□ -0.24
RHBDD1-204ENST00000423616 PIGBQ92521 554 aa13.55□□□□□ -0.24
RHBDD1-204ENST00000423616 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
RHBDD1-204ENST00000423616 CCDC85CA6NKD9 419 aa13.54□□□□□ -0.24
RHBDD1-204ENST00000423616 GYS1P13807 737 aa13.54□□□□□ -0.24
RHBDD1-204ENST00000423616 RFC4P35249 363 aa13.54□□□□□ -0.24
RHBDD1-204ENST00000423616 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
RHBDD1-204ENST00000423616 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
RHBDD1-204ENST00000423616 CCDC88AQ3V6T2 1871 aa13.54□□□□□ -0.24
RHBDD1-204ENST00000423616 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
RHBDD1-204ENST00000423616 ITPK1Q13572 414 aa13.53□□□□□ -0.24
RHBDD1-204ENST00000423616 COG3Q96JB2 828 aa13.53□□□□□ -0.24
RHBDD1-204ENST00000423616 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
RHBDD1-204ENST00000423616 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.24
RHBDD1-204ENST00000423616 CYP27B1O15528 508 aa13.52□□□□□ -0.25
RHBDD1-204ENST00000423616 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.25
RHBDD1-204ENST00000423616 MAP2K1Q02750 393 aaPredicted RBP13.52□□□□□ -0.25
RHBDD1-204ENST00000423616 RASSF7Q02833 373 aa13.52□□□□□ -0.25
RHBDD1-204ENST00000423616 A0A1W2PP64 1363 aa13.52□□□□□ -0.25
RHBDD1-204ENST00000423616 DLEC1Q9Y238 1755 aa13.52□□□□□ -0.25
RHBDD1-204ENST00000423616 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
RHBDD1-204ENST00000423616 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
RHBDD1-204ENST00000423616 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
RHBDD1-204ENST00000423616 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
RHBDD1-204ENST00000423616 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
RHBDD1-204ENST00000423616 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
RHBDD1-204ENST00000423616 VEGFBP49765 207 aa13.5□□□□□ -0.25
RHBDD1-204ENST00000423616 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
RHBDD1-204ENST00000423616 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
RHBDD1-204ENST00000423616 KDRP35968 1356 aa13.49□□□□□ -0.25
RHBDD1-204ENST00000423616 TMEM88BA6NKF7 163 aa13.49□□□□□ -0.25
RHBDD1-204ENST00000423616 PASKQ96RG2 1323 aa13.48□□□□□ -0.25
RHBDD1-204ENST00000423616 POTECB2RU33 542 aa13.48□□□□□ -0.25
RHBDD1-204ENST00000423616 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
RHBDD1-204ENST00000423616 CHRNA5P30532 468 aa13.48□□□□□ -0.25
RHBDD1-204ENST00000423616 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
RHBDD1-204ENST00000423616 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
RHBDD1-204ENST00000423616 INSRP06213 1382 aa13.47□□□□□ -0.25
RHBDD1-204ENST00000423616 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
RHBDD1-204ENST00000423616 SCN4AP35499 1836 aa13.46□□□□□ -0.25
RHBDD1-204ENST00000423616 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
RHBDD1-204ENST00000423616 LDHDQ86WU2 507 aa13.46□□□□□ -0.25
RHBDD1-204ENST00000423616 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.25
RHBDD1-204ENST00000423616 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
RHBDD1-204ENST00000423616 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.26
RHBDD1-204ENST00000423616 RASSF10A6NK89 507 aa13.45□□□□□ -0.26
RHBDD1-204ENST00000423616 FLT4P35916 1363 aa13.45□□□□□ -0.26
RHBDD1-204ENST00000423616 USP42Q9H9J4 1324 aaKnown RBP13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 DDR1Q08345 913 aa13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
RHBDD1-204ENST00000423616 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
RHBDD1-204ENST00000423616 NCAPD2Q15021 1401 aa13.43□□□□□ -0.26
RHBDD1-204ENST00000423616 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
RHBDD1-204ENST00000423616 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
RHBDD1-204ENST00000423616 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
RHBDD1-204ENST00000423616 NFKBIEO00221 500 aa13.42□□□□□ -0.26
RHBDD1-204ENST00000423616 POLRMTO00411 1230 aaKnown RBP13.42□□□□□ -0.26
RHBDD1-204ENST00000423616 FKBP8Q14318 412 aa13.42□□□□□ -0.26
RHBDD1-204ENST00000423616 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
RHBDD1-204ENST00000423616 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
RHBDD1-204ENST00000423616 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms