RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.34
TNC-203ENST00000423613 NUP133Q8WUM0 1156 aa12.95□□□□□ -0.34
TNC-203ENST00000423613 SIL1Q9H173 461 aa12.95□□□□□ -0.34
TNC-203ENST00000423613 K7ELQ4 463 aaPredicted RBP12.95□□□□□ -0.34
TNC-203ENST00000423613 HSPA4P34932 840 aa12.95□□□□□ -0.34
TNC-203ENST00000423613 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
TNC-203ENST00000423613 C16orf45Q96MC5 204 aaPredicted RBP12.95□□□□□ -0.34
TNC-203ENST00000423613 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
TNC-203ENST00000423613 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
TNC-203ENST00000423613 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 TRMT1Q9NXH9 659 aaKnown RBP12.94□□□□□ -0.34
TNC-203ENST00000423613 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
TNC-203ENST00000423613 MYZAPP0CAP1 466 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
TNC-203ENST00000423613 CCDC6Q16204 474 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 ME1P48163 572 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 CAMK4Q16566 473 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
TNC-203ENST00000423613 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
TNC-203ENST00000423613 CCDC69A6NI79 296 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 MCM3P25205 808 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 NAA25Q14CX7 972 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 USP5P45974 858 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 CA8P35219 290 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 PIBF1Q8WXW3 757 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 UPF3BQ9BZI7 483 aaKnown RBP12.93□□□□□ -0.34
TNC-203ENST00000423613 MVPQ14764 893 aaKnown RBP12.93□□□□□ -0.34
TNC-203ENST00000423613 NBPF8Q3BBV2 869 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 CFTRP13569 1480 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 SSBP05455 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNC-203ENST00000423613 SETSIPP0DME0 302 aa12.93□□□□□ -0.34
TNC-203ENST00000423613 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
TNC-203ENST00000423613 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 MCM4P33991 863 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 DNA2P51530 1060 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 FAM114A1Q8IWE2 563 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 HYPKQ9NX55 129 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 WDR33Q9C0J8 1336 aaKnown RBP12.92□□□□□ -0.34
TNC-203ENST00000423613 KIF4BQ2VIQ3 1234 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 C6orf163Q5TEZ5 329 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 SRCIN1Q9C0H9 1055 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 FBF1Q8TES7 1133 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 KIF5CO60282 957 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 DESP17661 470 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
TNC-203ENST00000423613 IGSF3O75054 1194 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 ANKRD1Q15327 319 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 PNISRQ8TF01 805 aaKnown RBP12.91□□□□□ -0.34
TNC-203ENST00000423613 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 MAATS1Q7Z4T9 603 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
TNC-203ENST00000423613 CCDC57Q2TAC2 916 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 KRT222Q8N1A0 295 aa12.91□□□□□ -0.34
TNC-203ENST00000423613 KIF2AO00139 706 aaPredicted RBP12.91□□□□□ -0.34
TNC-203ENST00000423613 ZPR1O75312 459 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 MIPOL1Q8TD10 442 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 ZSCAN12O43309 604 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 CFAP100Q494V2 611 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 HFM1A2PYH4 1435 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 IVLP07476 585 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 LIG1P18858 919 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 STIM1Q13586 685 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 DRC1Q96MC2 740 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 GTPBP4Q9BZE4 634 aaKnown RBP12.9□□□□□ -0.34
TNC-203ENST00000423613 KIAA1107Q9UPP5 1409 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 KIF3CO14782 793 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 KRT85P78386 507 aa12.9□□□□□ -0.34
TNC-203ENST00000423613 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
TNC-203ENST00000423613 LARP1BQ659C4 914 aaKnown RBP12.9□□□□□ -0.34
TNC-203ENST00000423613 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
TNC-203ENST00000423613 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 ZBTB9Q96C00 473 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
TNC-203ENST00000423613 CRACR2BQ8N4Y2 399 aaPredicted RBP12.89□□□□□ -0.35
TNC-203ENST00000423613 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 TRIM22Q8IYM9 498 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
TNC-203ENST00000423613 AACSQ86V21 672 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 SWAP70Q9UH65 585 aa12.89□□□□□ -0.35
TNC-203ENST00000423613 ANKRD18BA2A2Z9 1011 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 SMTNL1A8MU46 457 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 KIF4AO95239 1232 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms