RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ADGBQ8N7X0 1667 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 ARHGEF10O15013 1369 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 CCDC7Q96M83 1385 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NBPF9Q3BBW0 867 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NBPF6Q5VWK0 638 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NBPF5PQ86XG9 351 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NBPF4Q96M43 638 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NYXQ9GZU5 481 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 RBM28Q9NW13 759 aaKnown RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 PALM3A6NDB9 673 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 ZEB2O60315 1214 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 VEGFAP15692 232 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NOLC1Q14978 699 aaKnown RBP eCLIP4.42□□□□□ -1.71e-8■□□□□ 9.4
TOP2A-201ENST00000423485 HS1BP3Q53T59 392 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 MPRIPQ6WCQ1 1025 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 CCDC102AQ96A19 550 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 ATP6V1AP38606 617 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 TMF1P82094 1093 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 SMCR8Q8TEV9 937 aaPredicted RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 RBM17Q96I25 401 aaKnown RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 MYD88Q99836 296 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 CHD1O14646 1710 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 USP32Q8NFA0 1604 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 ALDH1B1P30837 517 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 C1QTNF8P60827 252 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 CCDC24Q8N4L8 307 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 GJD4Q96KN9 370 aaPredicted RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 MKRN1Q9UHC7 482 aaKnown RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 C9orf84Q5VXU9 1444 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 MYCP01106 439 aaPredicted RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 TFRCP02786 760 aaKnown RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 DLG5Q8TDM6 1919 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 ADGRB1O14514 1584 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 ABCA6Q8N139 1617 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 ERFEQ4G0M1 354 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 MSL1Q68DK7 614 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 NKX2-3Q8TAU0 364 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 EXOC4Q96A65 974 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 ZNF692Q9BU19 519 aaPredicted RBP4.41□□□□□ -1.7
TOP2A-201ENST00000423485 MTFR1LQ9H019 292 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 MFSD1Q9H3U5 465 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 PICK1Q9NRD5 415 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 AK9Q5TCS8 1911 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 RTEL1-TNFRSF6BF6WH68 1400 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
TOP2A-201ENST00000423485 FEZ1Q99689 392 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 HACL1Q9UJ83 578 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 MIA2Q96PC5 1412 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 KDM5AP29375 1690 aaKnown RBP4.4□□□□□ -1.7
TOP2A-201ENST00000423485 UQCRHP07919 91 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 CNGA1P29973 690 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 FAM122AQ96E09 287 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 TMOD4Q9NZQ9 345 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 PTPRTO14522 1441 aa4.4□□□□□ -1.7
TOP2A-201ENST00000423485 CRACR2BQ8N4Y2 399 aaPredicted RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 PPM1EQ8WY54 764 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 TOMM22Q9NS69 142 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 RAPGEF6Q8TEU7 1601 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 GNPATO15228 680 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 NCLP19338 710 aaKnown RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 LRSAM1Q6UWE0 723 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 NUP155O75694 1391 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 SPATA31D1Q6ZQQ2 1576 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 IGHMBP2P38935 993 aaKnown RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 BIRC2Q13490 618 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 NBPF10Q6P3W6 841 aaKnown RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 REM2Q8IYK8 340 aaPredicted RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 TRAK1Q9UPV9 953 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 NOC2LQ9Y3T9 749 aaKnown RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 LRRFIP2Q9Y608 721 aaKnown RBP4.4□□□□□ -1.71
TOP2A-201ENST00000423485 CCDC144AA2RUR9 1427 aa4.4□□□□□ -1.71
TOP2A-201ENST00000423485 ERO1AQ96HE7 468 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 IRF2BPLQ9H1B7 796 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 NRXN3Q9Y4C0 1643 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 NPHP4O75161 1426 aaPredicted RBP4.39□□□□□ -1.71
TOP2A-201ENST00000423485 ALDH1A1P00352 501 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 DEFB115Q30KQ5 88 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 HSP90AB3PQ58FF7 597 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 IFFO2Q5TF58 517 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 ENGASEQ8NFI3 743 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 ZNF521Q96K83 1311 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.39□□□□□ -1.718e-38■■□□□ 13
TOP2A-201ENST00000423485 UHRF1BP1LA0JNW5 1464 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 TMEM265A0A087WTH1 108 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 ATP5J2-PTCD1G3V325 749 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 SLC3A2P08195 630 aaKnown RBP4.39□□□□□ -1.71
TOP2A-201ENST00000423485 VSIG10Q8N0Z9 540 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 CLASP1Q7Z460 1538 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 CCDC27Q2M243 656 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 RUFY4Q6ZNE9 571 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 COA7Q96BR5 231 aa4.39□□□□□ -1.71
TOP2A-201ENST00000423485 CIZ1Q9ULV3 898 aaPredicted RBP4.39□□□□□ -1.71
TOP2A-201ENST00000423485 PPP1R42Q7Z4L9 355 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 C2CD5Q86YS7 1000 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 UPF1Q92900 1129 aaKnown RBP eCLIP4.38□□□□□ -1.716e-17■□□□□ 11.2
TOP2A-201ENST00000423485 MPHOSPH8Q99549 860 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 ADGRL2O95490 1459 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 CD163L1Q9NR16 1453 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 CRYBG3Q68DQ2 2970 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 TLR3O15455 904 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms