RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 PIGBQ92521 554 aa16.49■□□□□ 0.23
RPUSD3-203ENST00000423108 TSR2Q969E8 191 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-203ENST00000423108 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
RPUSD3-203ENST00000423108 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
RPUSD3-203ENST00000423108 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
RPUSD3-203ENST00000423108 E9PSI1 815 aa16.48■□□□□ 0.23
RPUSD3-203ENST00000423108 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-203ENST00000423108 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
RPUSD3-203ENST00000423108 SOCS7O14512 581 aa16.47■□□□□ 0.23
RPUSD3-203ENST00000423108 GNAI1P63096 354 aa16.47■□□□□ 0.23
RPUSD3-203ENST00000423108 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
RPUSD3-203ENST00000423108 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
RPUSD3-203ENST00000423108 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.23
RPUSD3-203ENST00000423108 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.23
RPUSD3-203ENST00000423108 BTBD11A6QL63 1104 aa16.46■□□□□ 0.23
RPUSD3-203ENST00000423108 MRC1P22897 1456 aa16.46■□□□□ 0.23
RPUSD3-203ENST00000423108 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
RPUSD3-203ENST00000423108 BCL9O00512 1426 aa16.45■□□□□ 0.22
RPUSD3-203ENST00000423108 SYTL4Q96C24 671 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-203ENST00000423108 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
RPUSD3-203ENST00000423108 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
RPUSD3-203ENST00000423108 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
RPUSD3-203ENST00000423108 FAM196AQ6ZSG2 479 aa16.44■□□□□ 0.22
RPUSD3-203ENST00000423108 MYH16Q9H6N6 1097 aa16.44■□□□□ 0.22
RPUSD3-203ENST00000423108 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
RPUSD3-203ENST00000423108 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
RPUSD3-203ENST00000423108 ASAP1Q9ULH1 1129 aa16.44■□□□□ 0.22
RPUSD3-203ENST00000423108 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-203ENST00000423108 EIF4A1P60842 406 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-203ENST00000423108 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
RPUSD3-203ENST00000423108 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
RPUSD3-203ENST00000423108 KAT6BQ8WYB5 2073 aa16.42■□□□□ 0.22
RPUSD3-203ENST00000423108 VIRMAQ69YN4 1812 aaKnown RBP16.41■□□□□ 0.22
RPUSD3-203ENST00000423108 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
RPUSD3-203ENST00000423108 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-203ENST00000423108 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-203ENST00000423108 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
RPUSD3-203ENST00000423108 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-203ENST00000423108 TRIM37O94972 964 aa16.39■□□□□ 0.21
RPUSD3-203ENST00000423108 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-203ENST00000423108 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
RPUSD3-203ENST00000423108 ITGB4P16144 1822 aa16.38■□□□□ 0.21
RPUSD3-203ENST00000423108 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
RPUSD3-203ENST00000423108 SLC4A9Q96Q91 983 aa16.38■□□□□ 0.21
RPUSD3-203ENST00000423108 PTCD1O75127 700 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-203ENST00000423108 VAMP4O75379 141 aa16.37■□□□□ 0.21
RPUSD3-203ENST00000423108 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
RPUSD3-203ENST00000423108 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
RPUSD3-203ENST00000423108 KDM3BQ7LBC6 1761 aa16.36■□□□□ 0.21
RPUSD3-203ENST00000423108 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
RPUSD3-203ENST00000423108 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
RPUSD3-203ENST00000423108 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
RPUSD3-203ENST00000423108 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
RPUSD3-203ENST00000423108 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
RPUSD3-203ENST00000423108 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
RPUSD3-203ENST00000423108 SMARCC1Q92922 1105 aaPredicted RBP16.33■□□□□ 0.2
RPUSD3-203ENST00000423108 USP16Q9Y5T5 823 aa16.33■□□□□ 0.2
RPUSD3-203ENST00000423108 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-203ENST00000423108 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-203ENST00000423108 KCNQ4P56696 695 aa16.32■□□□□ 0.2
RPUSD3-203ENST00000423108 PAPPAQ13219 1627 aa16.32■□□□□ 0.2
RPUSD3-203ENST00000423108 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
RPUSD3-203ENST00000423108 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
RPUSD3-203ENST00000423108 LOC102724428A0A0B4J2F2 783 aa16.31■□□□□ 0.2
RPUSD3-203ENST00000423108 SIK1P57059 783 aa16.31■□□□□ 0.2
RPUSD3-203ENST00000423108 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
RPUSD3-203ENST00000423108 APBA3O96018 575 aa16.3■□□□□ 0.2
RPUSD3-203ENST00000423108 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
RPUSD3-203ENST00000423108 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
RPUSD3-203ENST00000423108 ITPK1Q13572 414 aa16.3■□□□□ 0.2
RPUSD3-203ENST00000423108 PROM2Q8N271 834 aa16.3■□□□□ 0.2
RPUSD3-203ENST00000423108 BTAF1O14981 1849 aa16.3■□□□□ 0.2
RPUSD3-203ENST00000423108 HOXB7P09629 217 aa16.29■□□□□ 0.2
RPUSD3-203ENST00000423108 CT47B1P0C2W7 299 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-203ENST00000423108 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
RPUSD3-203ENST00000423108 SSH1Q8WYL5 1049 aa16.29■□□□□ 0.2
RPUSD3-203ENST00000423108 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPUSD3-203ENST00000423108 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
RPUSD3-203ENST00000423108 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
RPUSD3-203ENST00000423108 BCAR3O75815 825 aa16.28■□□□□ 0.2
RPUSD3-203ENST00000423108 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-203ENST00000423108 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
RPUSD3-203ENST00000423108 SOS1Q07889 1333 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-203ENST00000423108 A1BGP04217 495 aa16.27■□□□□ 0.2
RPUSD3-203ENST00000423108 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-203ENST00000423108 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
RPUSD3-203ENST00000423108 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
RPUSD3-203ENST00000423108 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.2
RPUSD3-203ENST00000423108 PLSCR1O15162 318 aa16.26■□□□□ 0.19
RPUSD3-203ENST00000423108 ANXA1P04083 346 aa16.26■□□□□ 0.19
RPUSD3-203ENST00000423108 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
RPUSD3-203ENST00000423108 PDIA6Q15084 440 aa16.26■□□□□ 0.19
RPUSD3-203ENST00000423108 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
RPUSD3-203ENST00000423108 MRPL50Q8N5N7 158 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-203ENST00000423108 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
RPUSD3-203ENST00000423108 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
RPUSD3-203ENST00000423108 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
RPUSD3-203ENST00000423108 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
RPUSD3-203ENST00000423108 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
RPUSD3-203ENST00000423108 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1025.5 ms