RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
ECHDC3-203ENST00000422887 RIPK4P57078 832 aa13.11□□□□□ -0.31
ECHDC3-203ENST00000422887 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
ECHDC3-203ENST00000422887 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
ECHDC3-203ENST00000422887 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
ECHDC3-203ENST00000422887 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
ECHDC3-203ENST00000422887 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
ECHDC3-203ENST00000422887 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
ECHDC3-203ENST00000422887 TMOD3Q9NYL9 352 aa13.1□□□□□ -0.31
ECHDC3-203ENST00000422887 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
ECHDC3-203ENST00000422887 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
ECHDC3-203ENST00000422887 TEFQ10587 303 aa13.09□□□□□ -0.31
ECHDC3-203ENST00000422887 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
ECHDC3-203ENST00000422887 CABP4P57796 275 aa13.08□□□□□ -0.32
ECHDC3-203ENST00000422887 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
ECHDC3-203ENST00000422887 KCNQ2O43526 872 aa13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
ECHDC3-203ENST00000422887 TRIM37O94972 964 aa13.06□□□□□ -0.32
ECHDC3-203ENST00000422887 MCM10Q7L590 875 aa13.06□□□□□ -0.32
ECHDC3-203ENST00000422887 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
ECHDC3-203ENST00000422887 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
ECHDC3-203ENST00000422887 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
ECHDC3-203ENST00000422887 CACNA1FO60840 1977 aa13.06□□□□□ -0.32
ECHDC3-203ENST00000422887 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 PIGBQ92521 554 aa13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 IL16Q14005 1332 aa13.04□□□□□ -0.32
ECHDC3-203ENST00000422887 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
ECHDC3-203ENST00000422887 PLSCR1O15162 318 aa13.03□□□□□ -0.32
ECHDC3-203ENST00000422887 BAG6P46379 1132 aa13.03□□□□□ -0.32
ECHDC3-203ENST00000422887 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
ECHDC3-203ENST00000422887 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
ECHDC3-203ENST00000422887 PALLDQ8WX93 1383 aa13.03□□□□□ -0.32
ECHDC3-203ENST00000422887 BTBD11A6QL63 1104 aa13.02□□□□□ -0.33
ECHDC3-203ENST00000422887 APBA3O96018 575 aa13.02□□□□□ -0.33
ECHDC3-203ENST00000422887 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
ECHDC3-203ENST00000422887 PROM2Q8N271 834 aa13.02□□□□□ -0.33
ECHDC3-203ENST00000422887 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
ECHDC3-203ENST00000422887 GNAI1P63096 354 aa13.01□□□□□ -0.33
ECHDC3-203ENST00000422887 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
ECHDC3-203ENST00000422887 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
ECHDC3-203ENST00000422887 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
ECHDC3-203ENST00000422887 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
ECHDC3-203ENST00000422887 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
ECHDC3-203ENST00000422887 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
ECHDC3-203ENST00000422887 ZNF790Q6PG37 636 aa13□□□□□ -0.33
ECHDC3-203ENST00000422887 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
ECHDC3-203ENST00000422887 ATG3Q9NT62 314 aa13□□□□□ -0.33
ECHDC3-203ENST00000422887 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
ECHDC3-203ENST00000422887 CHL1O00533 1208 aa12.99□□□□□ -0.33
ECHDC3-203ENST00000422887 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
ECHDC3-203ENST00000422887 TSPYL4Q9UJ04 414 aa12.99□□□□□ -0.33
ECHDC3-203ENST00000422887 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
ECHDC3-203ENST00000422887 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 MYH16Q9H6N6 1097 aa12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
ECHDC3-203ENST00000422887 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
ECHDC3-203ENST00000422887 E9PSI1 815 aa12.97□□□□□ -0.33
ECHDC3-203ENST00000422887 SIK1P57059 783 aa12.97□□□□□ -0.33
ECHDC3-203ENST00000422887 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
ECHDC3-203ENST00000422887 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
ECHDC3-203ENST00000422887 LRP5O75197 1615 aa12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 SOS1Q07889 1333 aaPredicted RBP12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 NUP98P52948 1817 aa12.96□□□□□ -0.33
ECHDC3-203ENST00000422887 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
ECHDC3-203ENST00000422887 HOXB7P09629 217 aa12.95□□□□□ -0.34
ECHDC3-203ENST00000422887 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
ECHDC3-203ENST00000422887 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
ECHDC3-203ENST00000422887 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
ECHDC3-203ENST00000422887 LAS1LQ9Y4W2 734 aaKnown RBP12.95□□□□□ -0.34
ECHDC3-203ENST00000422887 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 CHMP4AQ9BY43 222 aa12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
ECHDC3-203ENST00000422887 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
ECHDC3-203ENST00000422887 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
ECHDC3-203ENST00000422887 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
ECHDC3-203ENST00000422887 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms