RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 BOLA2Q9H3K6 86 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 PRM3Q9NNZ6 103 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 CNNM1Q9NRU3 951 aa12.64□□□□□ -0.39
SEMA4D-208ENST00000422704 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 CCDC83Q8IWF9 413 aa12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 PDCP20941 246 aa12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-208ENST00000422704 GUCY1B3Q02153 619 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 CCDC8Q9H0W5 538 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 TNMDQ9H2S6 317 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 NPATQ14207 1427 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 IDI1Q13907 227 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
SEMA4D-208ENST00000422704 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 BTBD11A6QL63 1104 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 FOXO3O43524 673 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 MCM2P49736 904 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 CEBPAP49715 358 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-208ENST00000422704 KRT85P78386 507 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 WDR33Q9C0J8 1336 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 TPM2P07951 284 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 OLFM4Q6UX06 510 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 MPRIPQ6WCQ1 1025 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 TFIP11Q9UBB9 837 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 NOS1P29475 1434 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 CABP4P57796 275 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 IKQ13123 557 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
SEMA4D-208ENST00000422704 TATP17735 454 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 AGLP35573 1532 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 OFD1O75665 1012 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 SERPINC1P01008 464 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 PIK3C2BO00750 1634 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 IDH1O75874 414 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 CCDC192P0DO97 292 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 SETBP1Q9Y6X0 1596 aa12.59□□□□□ -0.39
SEMA4D-208ENST00000422704 GPS2Q13227 327 aa12.58□□□□□ -0.39
SEMA4D-208ENST00000422704 NAT10Q9H0A0 1025 aaKnown RBP12.58□□□□□ -0.39
SEMA4D-208ENST00000422704 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.39
SEMA4D-208ENST00000422704 CKAP2LQ8IYA6 745 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 DTNBO60941 627 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 MX1P20591 662 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 TTC39AQ5SRH9 613 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 TESK2Q96S53 571 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 PANK2Q9BZ23 570 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.4
SEMA4D-208ENST00000422704 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 UQCRHLA0A096LP55 91 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 UQCRHP07919 91 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 CCDC47Q96A33 483 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 PPLO60437 1756 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 CCDC57Q2TAC2 916 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 TBC1D9Q6ZT07 1266 aa12.57□□□□□ -0.4
SEMA4D-208ENST00000422704 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms