RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 TFCP2L1Q9NZI6 479 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 KNSTRNQ9Y448 316 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
TRIM43CP-201ENST00000422468 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
TRIM43CP-201ENST00000422468 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
TRIM43CP-201ENST00000422468 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
TRIM43CP-201ENST00000422468 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
TRIM43CP-201ENST00000422468 ARXQ96QS3 562 aa11.18□□□□□ -0.62
TRIM43CP-201ENST00000422468 PHKG2P15735 406 aa11.17□□□□□ -0.62
TRIM43CP-201ENST00000422468 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
TRIM43CP-201ENST00000422468 PIGBQ92521 554 aa11.17□□□□□ -0.62
TRIM43CP-201ENST00000422468 FHDC1Q9C0D6 1143 aaPredicted RBP11.17□□□□□ -0.62
TRIM43CP-201ENST00000422468 MAP3K5Q99683 1374 aa11.16□□□□□ -0.62
TRIM43CP-201ENST00000422468 C4BP0C0L5 1744 aa11.16□□□□□ -0.62
TRIM43CP-201ENST00000422468 SYT17Q9BSW7 474 aa11.16□□□□□ -0.62
TRIM43CP-201ENST00000422468 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
TRIM43CP-201ENST00000422468 POLD1P28340 1107 aa11.15□□□□□ -0.62
TRIM43CP-201ENST00000422468 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
TRIM43CP-201ENST00000422468 UTRNP46939 3433 aa11.15□□□□□ -0.63
TRIM43CP-201ENST00000422468 PLEKHO1Q53GL0 409 aaPredicted RBP11.14□□□□□ -0.63
TRIM43CP-201ENST00000422468 CHD4Q14839 1912 aa11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 HSP90AB1P08238 724 aaKnown RBP11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 AMOTQ4VCS5 1084 aa11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 FLAD1Q8NFF5 587 aa11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 ASAP1Q9ULH1 1129 aa11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
TRIM43CP-201ENST00000422468 LOC102724428A0A0B4J2F2 783 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 YY1P25490 414 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 IL13P35225 146 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 SIK1P57059 783 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 CC2D1BQ5T0F9 858 aaKnown RBP11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 SULT6B1Q6IMI4 303 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 AK7Q96M32 723 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 KDRP35968 1356 aa11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 VIRMAQ69YN4 1812 aaKnown RBP11.12□□□□□ -0.63
TRIM43CP-201ENST00000422468 GOLGB1Q14789 3259 aaKnown RBP11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 MTHFSP49914 203 aa11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 NPC1L1Q9UHC9 1359 aa11.11□□□□□ -0.63
TRIM43CP-201ENST00000422468 KDM6AO15550 1401 aaPredicted RBP11.1□□□□□ -0.63
TRIM43CP-201ENST00000422468 C1orf141Q5JVX7 400 aa11.1□□□□□ -0.63
TRIM43CP-201ENST00000422468 COL5A3P25940 1745 aaPredicted RBP11.09□□□□□ -0.63
TRIM43CP-201ENST00000422468 ATP6V1AP38606 617 aa11.09□□□□□ -0.63
TRIM43CP-201ENST00000422468 ITPK1Q13572 414 aa11.09□□□□□ -0.63
TRIM43CP-201ENST00000422468 MSL1Q68DK7 614 aa11.09□□□□□ -0.63
TRIM43CP-201ENST00000422468 LINC00116Q8NCU8 138 aa11.09□□□□□ -0.63
TRIM43CP-201ENST00000422468 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
TRIM43CP-201ENST00000422468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 SSFA2P28290 1259 aa11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 CABP4P57796 275 aa11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 IFNLR1Q8IU57 520 aaPredicted RBP11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 MIER1Q8N108 512 aa11.08□□□□□ -0.64
TRIM43CP-201ENST00000422468 DIAPH1O60610 1272 aaKnown RBP11.07□□□□□ -0.64
TRIM43CP-201ENST00000422468 PHF14O94880 888 aa11.07□□□□□ -0.64
TRIM43CP-201ENST00000422468 GNPATO15228 680 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 GPR162Q16538 588 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 SMIM5Q71RC9 77 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 NLGN2Q8NFZ4 835 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 MYH14Q7Z406 1995 aaKnown RBP11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
TRIM43CP-201ENST00000422468 ADAMTS7Q9UKP4 1686 aa11.05□□□□□ -0.64
TRIM43CP-201ENST00000422468 HMOX1P09601 288 aa11.05□□□□□ -0.64
TRIM43CP-201ENST00000422468 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
TRIM43CP-201ENST00000422468 TJP1Q07157 1748 aa11.04□□□□□ -0.64
TRIM43CP-201ENST00000422468 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
TRIM43CP-201ENST00000422468 PPP2R1AP30153 589 aa11.04□□□□□ -0.64
TRIM43CP-201ENST00000422468 RC3H1Q5TC82 1133 aaKnown RBP11.04□□□□□ -0.64
TRIM43CP-201ENST00000422468 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
TRIM43CP-201ENST00000422468 C4AP0C0L4 1744 aa11.04□□□□□ -0.64
TRIM43CP-201ENST00000422468 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
TRIM43CP-201ENST00000422468 DDX10Q13206 875 aaKnown RBP11.03□□□□□ -0.64
TRIM43CP-201ENST00000422468 TRAPPC3LQ5T215 181 aa11.03□□□□□ -0.64
TRIM43CP-201ENST00000422468 DIEXFQ68CQ4 756 aaKnown RBP11.03□□□□□ -0.64
TRIM43CP-201ENST00000422468 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
TRIM43CP-201ENST00000422468 MRC1P22897 1456 aa11.03□□□□□ -0.64
TRIM43CP-201ENST00000422468 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
TRIM43CP-201ENST00000422468 MTHFSDQ2M296 383 aaKnown RBP11.02□□□□□ -0.65
TRIM43CP-201ENST00000422468 SLC52A2Q9HAB3 445 aa11.02□□□□□ -0.65
TRIM43CP-201ENST00000422468 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
TRIM43CP-201ENST00000422468 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.65
TRIM43CP-201ENST00000422468 UBR2Q8IWV8 1755 aa11.01□□□□□ -0.65
TRIM43CP-201ENST00000422468 U2SURPO15042 1029 aaKnown RBP11.01□□□□□ -0.65
TRIM43CP-201ENST00000422468 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
TRIM43CP-201ENST00000422468 GRIN3BO60391 1043 aa11.01□□□□□ -0.65
TRIM43CP-201ENST00000422468 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
TRIM43CP-201ENST00000422468 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms