RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
CDH1-202ENST00000422392 NUCB2P80303 420 aa19.39■□□□□ 0.69
CDH1-202ENST00000422392 LTV1Q96GA3 475 aaPredicted RBP19.39■□□□□ 0.69
CDH1-202ENST00000422392 KDRP35968 1356 aa19.38■□□□□ 0.69
CDH1-202ENST00000422392 SETD1BQ9UPS6 1966 aaKnown RBP19.38■□□□□ 0.69
CDH1-202ENST00000422392 IGSF1Q8N6C5 1336 aa19.38■□□□□ 0.69
CDH1-202ENST00000422392 ESPNB1AK53 854 aa19.38■□□□□ 0.69
CDH1-202ENST00000422392 CAVIN1Q6NZI2 390 aaKnown RBP19.38■□□□□ 0.69
CDH1-202ENST00000422392 NLRP6P59044 892 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 TRIM44Q96DX7 344 aaPredicted RBP19.37■□□□□ 0.69
CDH1-202ENST00000422392 NAP1L5Q96NT1 182 aaPredicted RBP19.37■□□□□ 0.69
CDH1-202ENST00000422392 OSBPL3Q9H4L5 887 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 ZDHHC9Q9Y397 364 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 TTC21AQ8NDW8 1320 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 NEK4P51957 841 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 LMBRD1Q9NUN5 540 aa19.37■□□□□ 0.69
CDH1-202ENST00000422392 NOL8Q76FK4 1167 aaKnown RBP19.36■□□□□ 0.69
CDH1-202ENST00000422392 RILPL2Q969X0 211 aa19.36■□□□□ 0.69
CDH1-202ENST00000422392 TUBGCP6Q96RT7 1819 aa19.36■□□□□ 0.69
CDH1-202ENST00000422392 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
CDH1-202ENST00000422392 PALD1Q9ULE6 856 aa19.36■□□□□ 0.69
CDH1-202ENST00000422392 FAM208AQ9UK61 1670 aaKnown RBP19.35■□□□□ 0.69
CDH1-202ENST00000422392 TRIM6-TRIM34B2RNG4 842 aa19.35■□□□□ 0.69
CDH1-202ENST00000422392 NASPP49321 788 aaPredicted RBP19.35■□□□□ 0.69
CDH1-202ENST00000422392 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
CDH1-202ENST00000422392 SALL3Q9BXA9 1300 aa19.35■□□□□ 0.69
CDH1-202ENST00000422392 XRN1Q8IZH2 1706 aaKnown RBP19.35■□□□□ 0.69
CDH1-202ENST00000422392 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
CDH1-202ENST00000422392 MX1P20591 662 aa19.35■□□□□ 0.69
CDH1-202ENST00000422392 USHBP1Q8N6Y0 703 aa19.35■□□□□ 0.69
CDH1-202ENST00000422392 GNAT3A8MTJ3 354 aa19.34■□□□□ 0.69
CDH1-202ENST00000422392 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
CDH1-202ENST00000422392 CCDC30Q5VVM6 783 aa19.34■□□□□ 0.69
CDH1-202ENST00000422392 UNC5CLQ8IV45 518 aa19.34■□□□□ 0.69
CDH1-202ENST00000422392 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
CDH1-202ENST00000422392 ESYT1Q9BSJ8 1104 aa19.33■□□□□ 0.69
CDH1-202ENST00000422392 RBM27Q9P2N5 1060 aaKnown RBP19.33■□□□□ 0.69
CDH1-202ENST00000422392 DIP2AQ14689 1571 aa19.33■□□□□ 0.68
CDH1-202ENST00000422392 ZSCAN23Q3MJ62 389 aa19.33■□□□□ 0.68
CDH1-202ENST00000422392 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.68
CDH1-202ENST00000422392 IL1RAPL2Q9NP60 686 aa19.33■□□□□ 0.68
CDH1-202ENST00000422392 HOXC9P31274 260 aa19.32■□□□□ 0.68
CDH1-202ENST00000422392 ANO2Q9NQ90 1003 aa19.32■□□□□ 0.68
CDH1-202ENST00000422392 ATP8B2P98198 1209 aa19.32■□□□□ 0.68
CDH1-202ENST00000422392 GPT2Q8TD30 523 aa19.32■□□□□ 0.68
CDH1-202ENST00000422392 TMX3Q96JJ7 454 aa19.32■□□□□ 0.68
CDH1-202ENST00000422392 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
CDH1-202ENST00000422392 GNAI3P08754 354 aa19.31■□□□□ 0.68
CDH1-202ENST00000422392 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
CDH1-202ENST00000422392 IL25Q9H293 177 aa19.31■□□□□ 0.68
CDH1-202ENST00000422392 USP44Q9H0E7 712 aa19.3■□□□□ 0.68
CDH1-202ENST00000422392 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
CDH1-202ENST00000422392 LRRC37A3O60309 1634 aa19.3■□□□□ 0.68
CDH1-202ENST00000422392 IBTKQ9P2D0 1353 aaPredicted RBP19.3■□□□□ 0.68
CDH1-202ENST00000422392 MAP4K4O95819 1239 aaPredicted RBP19.3■□□□□ 0.68
CDH1-202ENST00000422392 CHMLP26374 656 aa19.3■□□□□ 0.68
CDH1-202ENST00000422392 C14orf37Q86TY3 774 aa19.3■□□□□ 0.68
CDH1-202ENST00000422392 NUTM1Q86Y26 1132 aa19.29■□□□□ 0.68
CDH1-202ENST00000422392 ABTB2Q8N961 1025 aa19.28■□□□□ 0.68
CDH1-202ENST00000422392 UPF3BQ9BZI7 483 aaKnown RBP19.28■□□□□ 0.68
CDH1-202ENST00000422392 NWD1Q149M9 1564 aa19.28■□□□□ 0.68
CDH1-202ENST00000422392 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
CDH1-202ENST00000422392 PRIM1P49642 420 aaKnown RBP19.27■□□□□ 0.68
CDH1-202ENST00000422392 ZNF445P59923 1031 aa19.27■□□□□ 0.68
CDH1-202ENST00000422392 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.68
CDH1-202ENST00000422392 RBSNQ9H1K0 784 aa19.27■□□□□ 0.68
CDH1-202ENST00000422392 MAP3K5Q99683 1374 aa19.27■□□□□ 0.68
CDH1-202ENST00000422392 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.67
CDH1-202ENST00000422392 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.67
CDH1-202ENST00000422392 FOXD4L6Q3SYB3 417 aaPredicted RBP19.27■□□□□ 0.67
CDH1-202ENST00000422392 HDGFL1Q5TGJ6 251 aa19.27■□□□□ 0.67
CDH1-202ENST00000422392 FOXD4L3Q6VB84 417 aaPredicted RBP19.27■□□□□ 0.67
CDH1-202ENST00000422392 HTATSF1O43719 755 aaKnown RBP19.26■□□□□ 0.67
CDH1-202ENST00000422392 UBTFL1P0CB47 393 aaPredicted RBP19.26■□□□□ 0.67
CDH1-202ENST00000422392 PRKCSHP14314 528 aaPredicted RBP19.26■□□□□ 0.67
CDH1-202ENST00000422392 TCHHQ07283 1943 aa19.25■□□□□ 0.67
CDH1-202ENST00000422392 PPP1R9BQ96SB3 815 aa19.25■□□□□ 0.67
CDH1-202ENST00000422392 TBX22Q9Y458 520 aa19.25■□□□□ 0.67
CDH1-202ENST00000422392 TMEM63CQ9P1W3 806 aa19.25■□□□□ 0.67
CDH1-202ENST00000422392 KCNA6P17658 529 aa19.24■□□□□ 0.67
CDH1-202ENST00000422392 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
CDH1-202ENST00000422392 RBM33Q96EV2 1170 aaKnown RBP19.24■□□□□ 0.67
CDH1-202ENST00000422392 ANXA1P04083 346 aa19.24■□□□□ 0.67
CDH1-202ENST00000422392 PPP1R42Q7Z4L9 355 aa19.24■□□□□ 0.67
CDH1-202ENST00000422392 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
CDH1-202ENST00000422392 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
CDH1-202ENST00000422392 MCCP23508 829 aa19.23■□□□□ 0.67
CDH1-202ENST00000422392 SYCE3A1L190 88 aa19.23■□□□□ 0.67
CDH1-202ENST00000422392 STAP2Q9UGK3 403 aa19.23■□□□□ 0.67
CDH1-202ENST00000422392 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
CDH1-202ENST00000422392 NBPF7P0C2Y1 421 aaPredicted RBP19.22■□□□□ 0.67
CDH1-202ENST00000422392 LGR6Q9HBX8 967 aa19.22■□□□□ 0.67
CDH1-202ENST00000422392 SOS1Q07889 1333 aaPredicted RBP19.22■□□□□ 0.67
CDH1-202ENST00000422392 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
CDH1-202ENST00000422392 KCNQ3O43525 872 aa19.21■□□□□ 0.67
CDH1-202ENST00000422392 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
CDH1-202ENST00000422392 LTN1O94822 1766 aa19.21■□□□□ 0.67
CDH1-202ENST00000422392 BRD1O95696 1058 aa19.2■□□□□ 0.66
CDH1-202ENST00000422392 CUL4AQ13619 759 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms