RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 MEGF6O75095 1541 aa17.29■□□□□ 0.36
UFD1-203ENST00000421968 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
UFD1-203ENST00000421968 NME9Q86XW9 330 aa17.28■□□□□ 0.36
UFD1-203ENST00000421968 RASSF7Q02833 373 aa17.27■□□□□ 0.36
UFD1-203ENST00000421968 PARP3Q9Y6F1 533 aa17.27■□□□□ 0.36
UFD1-203ENST00000421968 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
UFD1-203ENST00000421968 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
UFD1-203ENST00000421968 POTECB2RU33 542 aa17.25■□□□□ 0.35
UFD1-203ENST00000421968 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
UFD1-203ENST00000421968 LMNB1P20700 586 aa17.24■□□□□ 0.35
UFD1-203ENST00000421968 SIK1P57059 783 aa17.24■□□□□ 0.35
UFD1-203ENST00000421968 TRAPPC3LQ5T215 181 aa17.23■□□□□ 0.35
UFD1-203ENST00000421968 VIRMAQ69YN4 1812 aaKnown RBP17.23■□□□□ 0.35
UFD1-203ENST00000421968 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
UFD1-203ENST00000421968 TNRC18O15417 2968 aaPredicted RBP17.22■□□□□ 0.35
UFD1-203ENST00000421968 KDM6AO15550 1401 aaPredicted RBP17.22■□□□□ 0.35
UFD1-203ENST00000421968 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
UFD1-203ENST00000421968 CHRNA5P30532 468 aa17.21■□□□□ 0.35
UFD1-203ENST00000421968 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
UFD1-203ENST00000421968 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
UFD1-203ENST00000421968 ITGB4P16144 1822 aa17.21■□□□□ 0.35
UFD1-203ENST00000421968 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
UFD1-203ENST00000421968 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
UFD1-203ENST00000421968 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
UFD1-203ENST00000421968 ITPK1Q13572 414 aa17.2■□□□□ 0.34
UFD1-203ENST00000421968 PIGBQ92521 554 aa17.2■□□□□ 0.34
UFD1-203ENST00000421968 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
UFD1-203ENST00000421968 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
UFD1-203ENST00000421968 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
UFD1-203ENST00000421968 GYS1P13807 737 aa17.19■□□□□ 0.34
UFD1-203ENST00000421968 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
UFD1-203ENST00000421968 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
UFD1-203ENST00000421968 TMEM88BA6NKF7 163 aa17.18■□□□□ 0.34
UFD1-203ENST00000421968 POTEIP0CG38 1075 aa17.18■□□□□ 0.34
UFD1-203ENST00000421968 POTEJP0CG39 1038 aa17.18■□□□□ 0.34
UFD1-203ENST00000421968 TATP17735 454 aaPredicted RBP17.18■□□□□ 0.34
UFD1-203ENST00000421968 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
UFD1-203ENST00000421968 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
UFD1-203ENST00000421968 HOXC9P31274 260 aa17.17■□□□□ 0.34
UFD1-203ENST00000421968 ARHGEF1Q92888 912 aaKnown RBP17.17■□□□□ 0.34
UFD1-203ENST00000421968 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
UFD1-203ENST00000421968 RFC4P35249 363 aa17.16■□□□□ 0.34
UFD1-203ENST00000421968 AMPHP49418 695 aa17.16■□□□□ 0.34
UFD1-203ENST00000421968 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
UFD1-203ENST00000421968 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
UFD1-203ENST00000421968 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
UFD1-203ENST00000421968 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.33
UFD1-203ENST00000421968 CYP27B1O15528 508 aa17.14■□□□□ 0.33
UFD1-203ENST00000421968 DEFB115Q30KQ5 88 aa17.14■□□□□ 0.33
UFD1-203ENST00000421968 ADRA2BP18089 450 aa17.13■□□□□ 0.33
UFD1-203ENST00000421968 BEGAINQ9BUH8 593 aa17.13■□□□□ 0.33
UFD1-203ENST00000421968 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
UFD1-203ENST00000421968 MAP3K19Q56UN5 1328 aa17.13■□□□□ 0.33
UFD1-203ENST00000421968 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
UFD1-203ENST00000421968 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
UFD1-203ENST00000421968 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
UFD1-203ENST00000421968 PRPF38BQ5VTL8 546 aaKnown RBP17.11■□□□□ 0.33
UFD1-203ENST00000421968 LDHDQ86WU2 507 aa17.1■□□□□ 0.33
UFD1-203ENST00000421968 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
UFD1-203ENST00000421968 NFKBIEO00221 500 aa17.09■□□□□ 0.33
UFD1-203ENST00000421968 DDR1Q08345 913 aa17.09■□□□□ 0.33
UFD1-203ENST00000421968 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
UFD1-203ENST00000421968 FBLN1P23142 703 aa17.08■□□□□ 0.32
UFD1-203ENST00000421968 ERFEQ4G0M1 354 aa17.08■□□□□ 0.32
UFD1-203ENST00000421968 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
UFD1-203ENST00000421968 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
UFD1-203ENST00000421968 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
UFD1-203ENST00000421968 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
UFD1-203ENST00000421968 FKBP8Q14318 412 aa17.07■□□□□ 0.32
UFD1-203ENST00000421968 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
UFD1-203ENST00000421968 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
UFD1-203ENST00000421968 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
UFD1-203ENST00000421968 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
UFD1-203ENST00000421968 TTLL6Q8N841 843 aa17.05■□□□□ 0.32
UFD1-203ENST00000421968 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
UFD1-203ENST00000421968 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
UFD1-203ENST00000421968 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
UFD1-203ENST00000421968 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
UFD1-203ENST00000421968 IQCA1LA6NCM1 817 aa17.04■□□□□ 0.32
UFD1-203ENST00000421968 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
UFD1-203ENST00000421968 CNTNAP4Q9C0A0 1308 aa17.03■□□□□ 0.32
UFD1-203ENST00000421968 DGKZQ13574 1117 aa17.03■□□□□ 0.32
UFD1-203ENST00000421968 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
UFD1-203ENST00000421968 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
UFD1-203ENST00000421968 COG3Q96JB2 828 aa17.03■□□□□ 0.32
UFD1-203ENST00000421968 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
UFD1-203ENST00000421968 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
UFD1-203ENST00000421968 POLRMTO00411 1230 aaKnown RBP17.02■□□□□ 0.32
UFD1-203ENST00000421968 GRM1Q13255 1194 aa17.02■□□□□ 0.32
UFD1-203ENST00000421968 TAF1DQ9H5J8 278 aaPredicted RBP17.02■□□□□ 0.32
UFD1-203ENST00000421968 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
UFD1-203ENST00000421968 CAPNS2Q96L46 248 aa17.01■□□□□ 0.31
UFD1-203ENST00000421968 SLC4A9Q96Q91 983 aa17.01■□□□□ 0.31
UFD1-203ENST00000421968 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
UFD1-203ENST00000421968 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
UFD1-203ENST00000421968 RTL1A6NKG5 1358 aa17.01■□□□□ 0.31
UFD1-203ENST00000421968 KDRP35968 1356 aa17.01■□□□□ 0.31
UFD1-203ENST00000421968 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
UFD1-203ENST00000421968 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
UFD1-203ENST00000421968 SOX10P56693 466 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms