RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 NFATC2IPQ8NCF5 419 aa27.88■■■□□ 2.05
ABCF3-202ENST00000421340 MIS18AQ9NYP9 233 aa27.87■■■□□ 2.05
ABCF3-202ENST00000421340 SEPT12Q8IYM1 358 aa27.86■■■□□ 2.05
ABCF3-202ENST00000421340 ZNF428Q96B54 188 aa27.86■■■□□ 2.05
ABCF3-202ENST00000421340 RCAN3Q9UKA8 241 aa27.85■■■□□ 2.05
ABCF3-202ENST00000421340 SOS1Q07889 1333 aaPredicted RBP27.85■■■□□ 2.05
ABCF3-202ENST00000421340 A0A0G2JS52 829 aa27.83■■■□□ 2.05
ABCF3-202ENST00000421340 MYT1Q01538 1121 aa27.83■■■□□ 2.05
ABCF3-202ENST00000421340 RGS17Q9UGC6 210 aaPredicted RBP27.83■■■□□ 2.05
ABCF3-202ENST00000421340 BCL9O00512 1426 aa27.83■■■□□ 2.05
ABCF3-202ENST00000421340 ILDR1Q86SU0 546 aaPredicted RBP27.82■■■□□ 2.04
ABCF3-202ENST00000421340 RXRBP28702 533 aa27.81■■■□□ 2.04
ABCF3-202ENST00000421340 TMOD3Q9NYL9 352 aa27.81■■■□□ 2.04
ABCF3-202ENST00000421340 SIPA1L3O60292 1781 aaPredicted RBP27.81■■■□□ 2.04
ABCF3-202ENST00000421340 VAMP4O75379 141 aa27.8■■■□□ 2.04
ABCF3-202ENST00000421340 EIF4A1P60842 406 aaKnown RBP27.8■■■□□ 2.04
ABCF3-202ENST00000421340 ZNF790Q6PG37 636 aa27.8■■■□□ 2.04
ABCF3-202ENST00000421340 C8orf58Q8NAV2 365 aa27.8■■■□□ 2.04
ABCF3-202ENST00000421340 TWISTNBQ3B726 338 aaPredicted RBP27.79■■■□□ 2.04
ABCF3-202ENST00000421340 HOXB7P09629 217 aa27.78■■■□□ 2.04
ABCF3-202ENST00000421340 CHMP4AQ9BY43 222 aa27.78■■■□□ 2.04
ABCF3-202ENST00000421340 HEG1Q9ULI3 1381 aa27.77■■■□□ 2.04
ABCF3-202ENST00000421340 TSPYL6Q8N831 410 aa27.77■■■□□ 2.04
ABCF3-202ENST00000421340 VIRMAQ69YN4 1812 aaKnown RBP27.76■■■□□ 2.04
ABCF3-202ENST00000421340 RARSP54136 660 aaKnown RBP27.76■■■□□ 2.03
ABCF3-202ENST00000421340 ALDH1L2Q3SY69 923 aa27.76■■■□□ 2.03
ABCF3-202ENST00000421340 PIGBQ92521 554 aa27.76■■■□□ 2.03
ABCF3-202ENST00000421340 KDM3BQ7LBC6 1761 aa27.76■■■□□ 2.03
ABCF3-202ENST00000421340 RNF123Q5XPI4 1314 aa27.75■■■□□ 2.03
ABCF3-202ENST00000421340 KCNQ3O43525 872 aa27.75■■■□□ 2.03
ABCF3-202ENST00000421340 PRIM1P49642 420 aaKnown RBP27.75■■■□□ 2.03
ABCF3-202ENST00000421340 TTC5Q8N0Z6 440 aa27.75■■■□□ 2.03
ABCF3-202ENST00000421340 TOGARAM1Q9Y4F4 1720 aa27.73■■■□□ 2.03
ABCF3-202ENST00000421340 POTEAQ6S8J7 498 aa27.73■■■□□ 2.03
ABCF3-202ENST00000421340 SUPT16HQ9Y5B9 1047 aaKnown RBP27.73■■■□□ 2.03
ABCF3-202ENST00000421340 BRPF1P55201 1214 aaPredicted RBP27.72■■■□□ 2.03
ABCF3-202ENST00000421340 SLC39A6Q13433 755 aa27.72■■■□□ 2.03
ABCF3-202ENST00000421340 KRT27Q7Z3Y8 459 aa27.72■■■□□ 2.03
ABCF3-202ENST00000421340 ELL2O00472 640 aaPredicted RBP27.71■■■□□ 2.03
ABCF3-202ENST00000421340 KRT24Q2M2I5 525 aa27.71■■■□□ 2.03
ABCF3-202ENST00000421340 FMNL2Q96PY5 1086 aa27.71■■■□□ 2.03
ABCF3-202ENST00000421340 GIGYF1O75420 1035 aaPredicted RBP27.7■■■□□ 2.02
ABCF3-202ENST00000421340 FAM196AQ6ZSG2 479 aa27.68■■■□□ 2.02
ABCF3-202ENST00000421340 SSH1Q8WYL5 1049 aa27.68■■■□□ 2.02
ABCF3-202ENST00000421340 SYTL4Q96C24 671 aaPredicted RBP27.68■■■□□ 2.02
ABCF3-202ENST00000421340 ZNF496Q96IT1 587 aaPredicted RBP27.68■■■□□ 2.02
ABCF3-202ENST00000421340 ATG3Q9NT62 314 aa27.68■■■□□ 2.02
ABCF3-202ENST00000421340 SNRPA1P09661 255 aaKnown RBP27.67■■■□□ 2.02
ABCF3-202ENST00000421340 ACSBG1Q96GR2 724 aa27.67■■■□□ 2.02
ABCF3-202ENST00000421340 CCDC30Q5VVM6 783 aa27.66■■■□□ 2.02
ABCF3-202ENST00000421340 VSIG10Q8N0Z9 540 aa27.66■■■□□ 2.02
ABCF3-202ENST00000421340 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.66■■■□□ 2.02
ABCF3-202ENST00000421340 PAPPAQ13219 1627 aa27.66■■■□□ 2.02
ABCF3-202ENST00000421340 BCAR3O75815 825 aa27.65■■■□□ 2.02
ABCF3-202ENST00000421340 SMARCC1Q92922 1105 aaPredicted RBP27.65■■■□□ 2.02
ABCF3-202ENST00000421340 ASAP1Q9ULH1 1129 aa27.65■■■□□ 2.02
ABCF3-202ENST00000421340 DOT1LQ8TEK3 1739 aa27.64■■■□□ 2.02
ABCF3-202ENST00000421340 RRP1P56182 461 aaKnown RBP27.64■■■□□ 2.02
ABCF3-202ENST00000421340 SMC4Q9NTJ3 1288 aa27.64■■■□□ 2.02
ABCF3-202ENST00000421340 ITGB4P16144 1822 aa27.64■■■□□ 2.01
ABCF3-202ENST00000421340 KCNQ2O43526 872 aa27.63■■■□□ 2.01
ABCF3-202ENST00000421340 MRPL50Q8N5N7 158 aaKnown RBP27.63■■■□□ 2.01
ABCF3-202ENST00000421340 KCPQ6ZWJ8 1503 aa27.62■■■□□ 2.01
ABCF3-202ENST00000421340 TEX13AQ9BXU3 409 aaPredicted RBP27.62■■■□□ 2.01
ABCF3-202ENST00000421340 RGS12O14924 1447 aa27.61■■■□□ 2.01
ABCF3-202ENST00000421340 HDGFL1Q5TGJ6 251 aa27.61■■■□□ 2.01
ABCF3-202ENST00000421340 FAM182BQ5T319 152 aa27.6■■■□□ 2.01
ABCF3-202ENST00000421340 STK31Q9BXU1 1019 aa27.6■■■□□ 2.01
ABCF3-202ENST00000421340 BCL11BQ9C0K0 894 aaPredicted RBP27.6■■■□□ 2.01
ABCF3-202ENST00000421340 KIF16BQ96L93 1317 aa27.6■■■□□ 2.01
ABCF3-202ENST00000421340 UBR2Q8IWV8 1755 aa27.6■■■□□ 2.01
ABCF3-202ENST00000421340 ARHGAP45Q92619 1136 aa27.59■■■□□ 2.01
ABCF3-202ENST00000421340 IPO8O15397 1037 aaKnown RBP27.58■■■□□ 2.01
ABCF3-202ENST00000421340 PTCD1O75127 700 aaKnown RBP27.58■■■□□ 2.01
ABCF3-202ENST00000421340 BCL2L13Q9BXK5 485 aa27.57■■■□□ 2
ABCF3-202ENST00000421340 NHSQ6T4R5 1651 aa27.56■■■□□ 2
ABCF3-202ENST00000421340 SLC4A2P04920 1241 aa27.56■■■□□ 2
ABCF3-202ENST00000421340 EIF2S2P20042 333 aaKnown RBP27.56■■■□□ 2
ABCF3-202ENST00000421340 BRWD3Q6RI45 1802 aa27.55■■■□□ 2
ABCF3-202ENST00000421340 PRAMEF22A3QJZ6 481 aa27.55■■■□□ 2
ABCF3-202ENST00000421340 DBF4Q9UBU7 674 aaPredicted RBP27.55■■■□□ 2
ABCF3-202ENST00000421340 USP16Q9Y5T5 823 aa27.55■■■□□ 2
ABCF3-202ENST00000421340 ERBB4Q15303 1308 aa27.55■■■□□ 2
ABCF3-202ENST00000421340 MS4A1P11836 297 aa27.54■■■□□ 2
ABCF3-202ENST00000421340 ZKSCAN2Q63HK3 967 aa27.54■■■□□ 2
ABCF3-202ENST00000421340 RBM42Q9BTD8 480 aaKnown RBP27.54■■■□□ 2
ABCF3-202ENST00000421340 NOB1Q9ULX3 412 aaKnown RBP27.54■■■□□ 2
ABCF3-202ENST00000421340 PALLDQ8WX93 1383 aa27.53■■■□□ 2
ABCF3-202ENST00000421340 NEFLP07196 543 aa27.53■■■□□ 2
ABCF3-202ENST00000421340 PDE3AQ14432 1141 aa27.53■■■□□ 2
ABCF3-202ENST00000421340 FRAT1Q92837 279 aaPredicted RBP27.52■■■□□ 2
ABCF3-202ENST00000421340 DDX21Q9NR30 783 aaKnown RBP eCLIP27.52■■■□□ 2
ABCF3-202ENST00000421340 PTPRCP08575 1304 aa27.51■■□□□ 1.99
ABCF3-202ENST00000421340 LOC102724428A0A0B4J2F2 783 aa27.51■■□□□ 1.99
ABCF3-202ENST00000421340 TCERG1O14776 1098 aaKnown RBP27.51■■□□□ 1.99
ABCF3-202ENST00000421340 PLIN1O60240 522 aa27.51■■□□□ 1.99
ABCF3-202ENST00000421340 CANXP27824 592 aaKnown RBP27.51■■□□□ 1.99
ABCF3-202ENST00000421340 SIK1P57059 783 aa27.51■■□□□ 1.99
ABCF3-202ENST00000421340 SLC4A9Q96Q91 983 aa27.51■■□□□ 1.99
ABCF3-202ENST00000421340 HYPKQ9NX55 129 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms