RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 CYP27B1O15528 508 aa23.02■■□□□ 1.28
PPFIA3-202ENST00000421230 RGS3P49796 1198 aa23.02■■□□□ 1.28
PPFIA3-202ENST00000421230 KRT24Q2M2I5 525 aa23.02■■□□□ 1.28
PPFIA3-202ENST00000421230 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
PPFIA3-202ENST00000421230 NRAPQ86VF7 1730 aa23.02■■□□□ 1.27
PPFIA3-202ENST00000421230 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
PPFIA3-202ENST00000421230 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
PPFIA3-202ENST00000421230 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
PPFIA3-202ENST00000421230 ZCRB1Q8TBF4 217 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-202ENST00000421230 LRP6O75581 1613 aa23■■□□□ 1.27
PPFIA3-202ENST00000421230 SPATA31A6Q5VVP1 1343 aa23■■□□□ 1.27
PPFIA3-202ENST00000421230 NGLY1Q96IV0 654 aa23■■□□□ 1.27
PPFIA3-202ENST00000421230 SLIT2O94813 1529 aa22.99■■□□□ 1.27
PPFIA3-202ENST00000421230 VAMP4O75379 141 aa22.99■■□□□ 1.27
PPFIA3-202ENST00000421230 TEFQ10587 303 aa22.99■■□□□ 1.27
PPFIA3-202ENST00000421230 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
PPFIA3-202ENST00000421230 PLEKHG2Q9H7P9 1386 aa22.99■■□□□ 1.27
PPFIA3-202ENST00000421230 SSH1Q8WYL5 1049 aa22.98■■□□□ 1.27
PPFIA3-202ENST00000421230 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
PPFIA3-202ENST00000421230 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.97■■□□□ 1.27
PPFIA3-202ENST00000421230 NWD2Q9ULI1 1742 aa22.97■■□□□ 1.27
PPFIA3-202ENST00000421230 DDX54Q8TDD1 881 aaKnown RBP22.97■■□□□ 1.27
PPFIA3-202ENST00000421230 SMC4Q9NTJ3 1288 aa22.97■■□□□ 1.27
PPFIA3-202ENST00000421230 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
PPFIA3-202ENST00000421230 PCDH11XQ9BZA7 1347 aa22.96■■□□□ 1.27
PPFIA3-202ENST00000421230 PCDH11YQ9BZA8 1340 aa22.96■■□□□ 1.27
PPFIA3-202ENST00000421230 ADAMTS7Q9UKP4 1686 aa22.95■■□□□ 1.26
PPFIA3-202ENST00000421230 SPATA31A1Q5TZJ5 1347 aa22.95■■□□□ 1.26
PPFIA3-202ENST00000421230 SCN11AQ9UI33 1791 aa22.95■■□□□ 1.26
PPFIA3-202ENST00000421230 IGHDP01880 384 aa22.94■■□□□ 1.26
PPFIA3-202ENST00000421230 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
PPFIA3-202ENST00000421230 BTBD11A6QL63 1104 aa22.94■■□□□ 1.26
PPFIA3-202ENST00000421230 CANXP27824 592 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-202ENST00000421230 UNC5CLQ8IV45 518 aa22.94■■□□□ 1.26
PPFIA3-202ENST00000421230 DISP2A7MBM2 1401 aa22.93■■□□□ 1.26
PPFIA3-202ENST00000421230 KCNQ3O43525 872 aa22.93■■□□□ 1.26
PPFIA3-202ENST00000421230 DCAF5Q96JK2 942 aa22.93■■□□□ 1.26
PPFIA3-202ENST00000421230 BABAM1Q9NWV8 329 aa22.93■■□□□ 1.26
PPFIA3-202ENST00000421230 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
PPFIA3-202ENST00000421230 MEX3CQ5U5Q3 659 aaKnown RBP22.92■■□□□ 1.26
PPFIA3-202ENST00000421230 BCL9LQ86UU0 1499 aa22.92■■□□□ 1.26
PPFIA3-202ENST00000421230 SPATA31A5Q5VU36 1347 aa22.92■■□□□ 1.26
PPFIA3-202ENST00000421230 SPATA31A7Q8IWB4 1347 aa22.92■■□□□ 1.26
PPFIA3-202ENST00000421230 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
PPFIA3-202ENST00000421230 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
PPFIA3-202ENST00000421230 HSP90AB1P08238 724 aaKnown RBP22.91■■□□□ 1.26
PPFIA3-202ENST00000421230 TNNQ9UQP3 1299 aa22.91■■□□□ 1.26
PPFIA3-202ENST00000421230 ALDH1L2Q3SY69 923 aa22.9■■□□□ 1.26
PPFIA3-202ENST00000421230 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
PPFIA3-202ENST00000421230 SLC52A2Q9HAB3 445 aa22.9■■□□□ 1.26
PPFIA3-202ENST00000421230 ZNF428Q96B54 188 aa22.9■■□□□ 1.26
PPFIA3-202ENST00000421230 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
PPFIA3-202ENST00000421230 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.26
PPFIA3-202ENST00000421230 FAM43AQ8N2R8 423 aa22.89■■□□□ 1.25
PPFIA3-202ENST00000421230 USP21Q9UK80 565 aa22.88■■□□□ 1.25
PPFIA3-202ENST00000421230 NOB1Q9ULX3 412 aaKnown RBP22.88■■□□□ 1.25
PPFIA3-202ENST00000421230 THRAP3Q9Y2W1 955 aaKnown RBP22.88■■□□□ 1.25
PPFIA3-202ENST00000421230 EXOC5O00471 708 aa22.87■■□□□ 1.25
PPFIA3-202ENST00000421230 EIF4A1P60842 406 aaKnown RBP22.87■■□□□ 1.25
PPFIA3-202ENST00000421230 MRPL50Q8N5N7 158 aaKnown RBP22.87■■□□□ 1.25
PPFIA3-202ENST00000421230 PANK1Q8TE04 598 aa22.87■■□□□ 1.25
PPFIA3-202ENST00000421230 CABP4P57796 275 aa22.86■■□□□ 1.25
PPFIA3-202ENST00000421230 SLC39A6Q13433 755 aa22.86■■□□□ 1.25
PPFIA3-202ENST00000421230 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
PPFIA3-202ENST00000421230 CLUAP1Q96AJ1 413 aa22.86■■□□□ 1.25
PPFIA3-202ENST00000421230 SEC24BO95487 1268 aa22.85■■□□□ 1.25
PPFIA3-202ENST00000421230 VPS72Q15906 364 aa22.85■■□□□ 1.25
PPFIA3-202ENST00000421230 ZKSCAN2Q63HK3 967 aa22.85■■□□□ 1.25
PPFIA3-202ENST00000421230 NECTIN2Q92692 538 aa22.85■■□□□ 1.25
PPFIA3-202ENST00000421230 MRC1P22897 1456 aa22.84■■□□□ 1.25
PPFIA3-202ENST00000421230 RLBP1P12271 317 aa22.84■■□□□ 1.25
PPFIA3-202ENST00000421230 BECN1Q14457 450 aa22.84■■□□□ 1.25
PPFIA3-202ENST00000421230 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.25
PPFIA3-202ENST00000421230 CDCA7Q9BWT1 371 aaPredicted RBP22.83■■□□□ 1.25
PPFIA3-202ENST00000421230 AFF2P51816 1311 aa22.83■■□□□ 1.25
PPFIA3-202ENST00000421230 BARGINQ6ZT62 677 aa22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 KIF16BQ96L93 1317 aa22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 TRIM27P14373 513 aa22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 BRPF1P55201 1214 aaPredicted RBP22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 DDB1Q16531 1140 aa22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 ZNF790Q6PG37 636 aa22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 TNS2Q63HR2 1409 aa22.82■■□□□ 1.24
PPFIA3-202ENST00000421230 ERVV-2B6SEH9 535 aa22.81■■□□□ 1.24
PPFIA3-202ENST00000421230 ATF7IPQ6VMQ6 1270 aa22.81■■□□□ 1.24
PPFIA3-202ENST00000421230 COG6Q9Y2V7 657 aa22.81■■□□□ 1.24
PPFIA3-202ENST00000421230 TOGARAM1Q9Y4F4 1720 aa22.8■■□□□ 1.24
PPFIA3-202ENST00000421230 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
PPFIA3-202ENST00000421230 ANTXR1Q9H6X2 564 aa22.8■■□□□ 1.24
PPFIA3-202ENST00000421230 IPO8O15397 1037 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-202ENST00000421230 EIF2S2P20042 333 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-202ENST00000421230 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-202ENST00000421230 PRAMEF22A3QJZ6 481 aa22.78■■□□□ 1.24
PPFIA3-202ENST00000421230 AAMPQ13685 434 aa22.78■■□□□ 1.24
PPFIA3-202ENST00000421230 FTSJ3Q8IY81 847 aaKnown RBP22.78■■□□□ 1.24
PPFIA3-202ENST00000421230 DZIP1LQ8IYY4 767 aaKnown RBP22.78■■□□□ 1.24
PPFIA3-202ENST00000421230 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
PPFIA3-202ENST00000421230 HDGFL1Q5TGJ6 251 aa22.77■■□□□ 1.24
PPFIA3-202ENST00000421230 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
PPFIA3-202ENST00000421230 GIGYF1O75420 1035 aaPredicted RBP22.77■■□□□ 1.24
PPFIA3-202ENST00000421230 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms