RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
CLCN4-203ENST00000421085 SOGA3Q5TF21 947 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 TMC6Q7Z403 805 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 ZNF830Q96NB3 372 aaPredicted RBP14.4□□□□□ -0.1
CLCN4-203ENST00000421085 PAXBP1Q9Y5B6 917 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 ABTB2Q8N961 1025 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 BCCIPQ9P287 314 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLCN4-203ENST00000421085 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
CLCN4-203ENST00000421085 CPLX3Q8WVH0 158 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
CLCN4-203ENST00000421085 UVSSAQ2YD98 709 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 PANK2Q9BZ23 570 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 CFTRP13569 1480 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 KRT222Q8N1A0 295 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 UBAC1Q9BSL1 405 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 MYL6BP14649 208 aa14.39□□□□□ -0.11
CLCN4-203ENST00000421085 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
CLCN4-203ENST00000421085 DDX19AQ9NUU7 478 aaKnown RBP14.39□□□□□ -0.11
CLCN4-203ENST00000421085 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 LUZP1Q86V48 1076 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 TBC1D32Q96NH3 1257 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 IFFO1Q0D2I5 559 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 SSH1Q8WYL5 1049 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 ANKRD30BQ9BXX2 1392 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 RBM25P49756 843 aaKnown RBP14.38□□□□□ -0.11
CLCN4-203ENST00000421085 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 GNL3LQ9NVN8 582 aaKnown RBP14.38□□□□□ -0.11
CLCN4-203ENST00000421085 PIBF1Q8WXW3 757 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 CABP1Q9NZU7 370 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 HFM1A2PYH4 1435 aa14.38□□□□□ -0.11
CLCN4-203ENST00000421085 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 LRSAM1Q6UWE0 723 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 C11orf95C9JLR9 678 aaPredicted RBP14.37□□□□□ -0.11
CLCN4-203ENST00000421085 TDO2P48775 406 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
CLCN4-203ENST00000421085 DNA2P51530 1060 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLCN4-203ENST00000421085 KIF1BPQ96EK5 621 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 FCHSD2O94868 740 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 STX1AQ16623 288 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 CDK19Q9BWU1 502 aa14.37□□□□□ -0.11
CLCN4-203ENST00000421085 GOPCQ9HD26 462 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 GLRX3O76003 335 aaKnown RBP14.36□□□□□ -0.11
CLCN4-203ENST00000421085 CCDC178Q5BJE1 867 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 LRPPRCP42704 1394 aaKnown RBP14.36□□□□□ -0.11
CLCN4-203ENST00000421085 RAB11FIP3O75154 756 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 TFIP11Q9UBB9 837 aaKnown RBP14.36□□□□□ -0.11
CLCN4-203ENST00000421085 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
CLCN4-203ENST00000421085 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 FSIP1Q8NA03 581 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 ZNF165P49910 485 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 NFE2L2Q16236 605 aa14.36□□□□□ -0.11
CLCN4-203ENST00000421085 STX6O43752 255 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 GJB2P29033 226 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 GTF2A1P52655 376 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-203ENST00000421085 MNAT1P51948 309 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 FKBP15Q5T1M5 1219 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 BIN1O00499 593 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 C8orf76Q96K31 380 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
CLCN4-203ENST00000421085 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 PLEKHH2Q8IVE3 1493 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-203ENST00000421085 ZSWIM4Q9H7M6 989 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 IGHDP01880 384 aa14.35□□□□□ -0.11
CLCN4-203ENST00000421085 UBE2HP62256 183 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 CCDC91Q7Z6B0 441 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
CLCN4-203ENST00000421085 DNAAF4Q8WXU2 420 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 THUMPD2Q9BTF0 503 aaKnown RBP14.34□□□□□ -0.11
CLCN4-203ENST00000421085 SSR1P43307 286 aaKnown RBP14.34□□□□□ -0.11
CLCN4-203ENST00000421085 ALDH1L2Q3SY69 923 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 CACNA2D4Q7Z3S7 1137 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 GIMAP6Q6P9H5 292 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 CNNM3Q8NE01 707 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 YEATS4O95619 227 aa14.34□□□□□ -0.11
CLCN4-203ENST00000421085 USO1O60763 962 aaKnown RBP14.33□□□□□ -0.11
CLCN4-203ENST00000421085 RRS1Q15050 365 aaKnown RBP14.33□□□□□ -0.12
CLCN4-203ENST00000421085 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 GOLGA6L9A6NEM1 432 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 GNG11P61952 73 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC171Q6TFL3 1326 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC175P0C221 793 aa14.33□□□□□ -0.12
CLCN4-203ENST00000421085 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
CLCN4-203ENST00000421085 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
CLCN4-203ENST00000421085 SMC1AQ14683 1233 aaKnown RBP14.32□□□□□ -0.12
CLCN4-203ENST00000421085 SPECC1Q5M775 1068 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC12Q8WUD4 166 aaPredicted RBP14.32□□□□□ -0.12
CLCN4-203ENST00000421085 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
CLCN4-203ENST00000421085 GPRASP1Q5JY77 1395 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms