RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
TMEM53-206ENST00000420706 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
TMEM53-206ENST00000420706 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
TMEM53-206ENST00000420706 RGS12O14924 1447 aa16.27■□□□□ 0.19
TMEM53-206ENST00000420706 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
TMEM53-206ENST00000420706 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
TMEM53-206ENST00000420706 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
TMEM53-206ENST00000420706 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
TMEM53-206ENST00000420706 MRC1P22897 1456 aa16.25■□□□□ 0.19
TMEM53-206ENST00000420706 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
TMEM53-206ENST00000420706 SOCS7O14512 581 aa16.25■□□□□ 0.19
TMEM53-206ENST00000420706 PRIM1P49642 420 aaKnown RBP16.25■□□□□ 0.19
TMEM53-206ENST00000420706 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
TMEM53-206ENST00000420706 BCL9O00512 1426 aa16.25■□□□□ 0.19
TMEM53-206ENST00000420706 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-206ENST00000420706 PIGBQ92521 554 aa16.24■□□□□ 0.19
TMEM53-206ENST00000420706 TSR2Q969E8 191 aaKnown RBP16.24■□□□□ 0.19
TMEM53-206ENST00000420706 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
TMEM53-206ENST00000420706 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
TMEM53-206ENST00000420706 ITGB4P16144 1822 aa16.24■□□□□ 0.19
TMEM53-206ENST00000420706 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
TMEM53-206ENST00000420706 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
TMEM53-206ENST00000420706 KCNQ3O43525 872 aa16.23■□□□□ 0.19
TMEM53-206ENST00000420706 FAM196AQ6ZSG2 479 aa16.23■□□□□ 0.19
TMEM53-206ENST00000420706 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
TMEM53-206ENST00000420706 KCNQ2O43526 872 aa16.22■□□□□ 0.19
TMEM53-206ENST00000420706 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
TMEM53-206ENST00000420706 SYTL4Q96C24 671 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-206ENST00000420706 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
TMEM53-206ENST00000420706 ZNF790Q6PG37 636 aa16.2■□□□□ 0.18
TMEM53-206ENST00000420706 KDM3BQ7LBC6 1761 aa16.2■□□□□ 0.18
TMEM53-206ENST00000420706 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
TMEM53-206ENST00000420706 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
TMEM53-206ENST00000420706 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
TMEM53-206ENST00000420706 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
TMEM53-206ENST00000420706 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
TMEM53-206ENST00000420706 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
TMEM53-206ENST00000420706 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
TMEM53-206ENST00000420706 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
TMEM53-206ENST00000420706 BCL11BQ9C0K0 894 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-206ENST00000420706 NHSQ6T4R5 1651 aa16.16■□□□□ 0.18
TMEM53-206ENST00000420706 TSPYL6Q8N831 410 aa16.16■□□□□ 0.18
TMEM53-206ENST00000420706 ZNF496Q96IT1 587 aaPredicted RBP16.16■□□□□ 0.18
TMEM53-206ENST00000420706 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
TMEM53-206ENST00000420706 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-206ENST00000420706 VAMP4O75379 141 aa16.15■□□□□ 0.18
TMEM53-206ENST00000420706 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
TMEM53-206ENST00000420706 TRIM37O94972 964 aa16.14■□□□□ 0.17
TMEM53-206ENST00000420706 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-206ENST00000420706 TWISTNBQ3B726 338 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-206ENST00000420706 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-206ENST00000420706 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
TMEM53-206ENST00000420706 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-206ENST00000420706 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-206ENST00000420706 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
TMEM53-206ENST00000420706 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
TMEM53-206ENST00000420706 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
TMEM53-206ENST00000420706 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
TMEM53-206ENST00000420706 BTAF1O14981 1849 aa16.12■□□□□ 0.17
TMEM53-206ENST00000420706 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
TMEM53-206ENST00000420706 HOXB7P09629 217 aa16.11■□□□□ 0.17
TMEM53-206ENST00000420706 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
TMEM53-206ENST00000420706 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
TMEM53-206ENST00000420706 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
TMEM53-206ENST00000420706 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
TMEM53-206ENST00000420706 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
TMEM53-206ENST00000420706 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
TMEM53-206ENST00000420706 PALLDQ8WX93 1383 aa16.1■□□□□ 0.17
TMEM53-206ENST00000420706 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
TMEM53-206ENST00000420706 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.16
TMEM53-206ENST00000420706 EIF2S2P20042 333 aaKnown RBP16.08■□□□□ 0.16
TMEM53-206ENST00000420706 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
TMEM53-206ENST00000420706 SIK1P57059 783 aa16.08■□□□□ 0.16
TMEM53-206ENST00000420706 TEX13AQ9BXU3 409 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-206ENST00000420706 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
TMEM53-206ENST00000420706 APBA3O96018 575 aa16.07■□□□□ 0.16
TMEM53-206ENST00000420706 ATP6V1AP38606 617 aa16.07■□□□□ 0.16
TMEM53-206ENST00000420706 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
TMEM53-206ENST00000420706 C5P01031 1676 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 PLSCR1O15162 318 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 ALDH1L2Q3SY69 923 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 SSH1Q8WYL5 1049 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
TMEM53-206ENST00000420706 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
TMEM53-206ENST00000420706 ITPK1Q13572 414 aa16.05■□□□□ 0.16
TMEM53-206ENST00000420706 LY75O60449 1722 aa16.05■□□□□ 0.16
TMEM53-206ENST00000420706 BCAR3O75815 825 aa16.04■□□□□ 0.16
TMEM53-206ENST00000420706 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
TMEM53-206ENST00000420706 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
TMEM53-206ENST00000420706 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
TMEM53-206ENST00000420706 STARD3NLO95772 234 aa16.03■□□□□ 0.16
TMEM53-206ENST00000420706 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
TMEM53-206ENST00000420706 BRPF1P55201 1214 aaPredicted RBP16.03■□□□□ 0.16
TMEM53-206ENST00000420706 SF3B2Q13435 895 aaKnown RBP16.03■□□□□ 0.16
TMEM53-206ENST00000420706 PROM2Q8N271 834 aa16.03■□□□□ 0.16
TMEM53-206ENST00000420706 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
TMEM53-206ENST00000420706 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms