RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ANKRD26Q9UPS8 1709 aa14.31□□□□□ -0.12
TNFAIP3-202ENST00000420009 PHF14O94880 888 aa14.3□□□□□ -0.12
TNFAIP3-202ENST00000420009 SSFA2P28290 1259 aa14.3□□□□□ -0.12
TNFAIP3-202ENST00000420009 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-202ENST00000420009 ZNF526Q8TF50 670 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-202ENST00000420009 SMIM5Q71RC9 77 aa14.29□□□□□ -0.12
TNFAIP3-202ENST00000420009 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
TNFAIP3-202ENST00000420009 SIK1P57059 783 aa14.28□□□□□ -0.12
TNFAIP3-202ENST00000420009 TMF1P82094 1093 aa14.28□□□□□ -0.12
TNFAIP3-202ENST00000420009 LINC00116Q8NCU8 138 aa14.28□□□□□ -0.12
TNFAIP3-202ENST00000420009 KIAA1551Q9HCM1 1747 aa14.27□□□□□ -0.12
TNFAIP3-202ENST00000420009 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
TNFAIP3-202ENST00000420009 KIF3CO14782 793 aa14.27□□□□□ -0.13
TNFAIP3-202ENST00000420009 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.13
TNFAIP3-202ENST00000420009 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
TNFAIP3-202ENST00000420009 ITPK1Q13572 414 aa14.26□□□□□ -0.13
TNFAIP3-202ENST00000420009 CARD14Q9BXL6 1004 aa14.26□□□□□ -0.13
TNFAIP3-202ENST00000420009 KIF13BQ9NQT8 1826 aa14.26□□□□□ -0.13
TNFAIP3-202ENST00000420009 KDRP35968 1356 aa14.25□□□□□ -0.13
TNFAIP3-202ENST00000420009 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
TNFAIP3-202ENST00000420009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■□□□□ 8.4
TNFAIP3-202ENST00000420009 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
TNFAIP3-202ENST00000420009 GNPATO15228 680 aa14.24□□□□□ -0.13
TNFAIP3-202ENST00000420009 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
TNFAIP3-202ENST00000420009 ASAP1Q9ULH1 1129 aa14.24□□□□□ -0.13
TNFAIP3-202ENST00000420009 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
TNFAIP3-202ENST00000420009 ZNF831Q5JPB2 1677 aa14.23□□□□□ -0.13
TNFAIP3-202ENST00000420009 PLEKHG2Q9H7P9 1386 aa14.23□□□□□ -0.13
TNFAIP3-202ENST00000420009 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
TNFAIP3-202ENST00000420009 MMP10P09238 476 aa14.23□□□□□ -0.13
TNFAIP3-202ENST00000420009 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
TNFAIP3-202ENST00000420009 PHKG2P15735 406 aa14.22□□□□□ -0.13
TNFAIP3-202ENST00000420009 EYA1Q99502 592 aa14.22□□□□□ -0.13
TNFAIP3-202ENST00000420009 ATP6V1AP38606 617 aa14.21□□□□□ -0.13
TNFAIP3-202ENST00000420009 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
TNFAIP3-202ENST00000420009 TGFB2P61812 414 aa14.2□□□□□ -0.14
TNFAIP3-202ENST00000420009 IFNL2Q8IZJ0 200 aa14.2□□□□□ -0.14
TNFAIP3-202ENST00000420009 COL5A3P25940 1745 aaPredicted RBP14.2□□□□□ -0.14
TNFAIP3-202ENST00000420009 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
TNFAIP3-202ENST00000420009 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
TNFAIP3-202ENST00000420009 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
TNFAIP3-202ENST00000420009 APLP1P51693 650 aa14.19□□□□□ -0.14
TNFAIP3-202ENST00000420009 BRCA1P38398 1863 aaKnown RBP14.18□□□□□ -0.14
TNFAIP3-202ENST00000420009 TOMM70O94826 608 aa14.18□□□□□ -0.14
TNFAIP3-202ENST00000420009 SLC4A9Q96Q91 983 aa14.18□□□□□ -0.14
TNFAIP3-202ENST00000420009 POLKQ9UBT6 870 aa14.18□□□□□ -0.14
TNFAIP3-202ENST00000420009 CNTNAP4Q9C0A0 1308 aa14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 A0A0G2JLW4 131 aa14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 NLGN1Q8N2Q7 840 aa14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 DNAJC5GQ8N7S2 189 aa14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 ZBTB12Q9Y330 459 aaPredicted RBP14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
TNFAIP3-202ENST00000420009 GYS1P13807 737 aa14.16□□□□□ -0.14
TNFAIP3-202ENST00000420009 EIF4A2Q14240 407 aaKnown RBP14.16□□□□□ -0.14
TNFAIP3-202ENST00000420009 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
TNFAIP3-202ENST00000420009 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
TNFAIP3-202ENST00000420009 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
TNFAIP3-202ENST00000420009 ERVV-2B6SEH9 535 aa14.15□□□□□ -0.14
TNFAIP3-202ENST00000420009 DPEP1P16444 411 aa14.15□□□□□ -0.14
TNFAIP3-202ENST00000420009 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
TNFAIP3-202ENST00000420009 NMRK2Q9NPI5 230 aa14.15□□□□□ -0.14
TNFAIP3-202ENST00000420009 CCDC87Q9NVE4 849 aa14.15□□□□□ -0.14
TNFAIP3-202ENST00000420009 ARFGEF1Q9Y6D6 1849 aa14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 WDR90Q96KV7 1748 aa14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 RPS6KA4O75676 772 aa14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 KCNA3P22001 575 aa14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 ARHGAP27Q6ZUM4 889 aa14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 DCAF5Q96JK2 942 aa14.13□□□□□ -0.15
TNFAIP3-202ENST00000420009 FCHSD2O94868 740 aa14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 HSP90AB1P08238 724 aaKnown RBP14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 RFC4P35249 363 aa14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 PARP3Q9Y6F1 533 aa14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
TNFAIP3-202ENST00000420009 C9orf131Q5VYM1 1079 aa14.11□□□□□ -0.15
TNFAIP3-202ENST00000420009 TJP1Q07157 1748 aa14.1□□□□□ -0.15
TNFAIP3-202ENST00000420009 USP42Q9H9J4 1324 aaKnown RBP14.1□□□□□ -0.15
TNFAIP3-202ENST00000420009 KCPQ6ZWJ8 1503 aa14.1□□□□□ -0.15
TNFAIP3-202ENST00000420009 DDR1Q08345 913 aa14.09□□□□□ -0.15
TNFAIP3-202ENST00000420009 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
TNFAIP3-202ENST00000420009 PIM2Q9P1W9 311 aa14.09□□□□□ -0.15
TNFAIP3-202ENST00000420009 ADAMTS7Q9UKP4 1686 aa14.09□□□□□ -0.15
TNFAIP3-202ENST00000420009 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 CRKLP46109 303 aaKnown RBP14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 CABP4P57796 275 aa14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 FSTL1Q12841 308 aa14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 FKBP8Q14318 412 aa14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 PLEKHO1Q53GL0 409 aaPredicted RBP14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 JMYQ8N9B5 988 aa14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 SRP68Q9UHB9 627 aaKnown RBP14.08□□□□□ -0.16
TNFAIP3-202ENST00000420009 TNRC6CQ9HCJ0 1690 aaKnown RBP14.07□□□□□ -0.16
TNFAIP3-202ENST00000420009 PCNTO95613 3336 aa14.07□□□□□ -0.16
TNFAIP3-202ENST00000420009 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
TNFAIP3-202ENST00000420009 DALRD3Q5D0E6 543 aaKnown RBP14.07□□□□□ -0.16
TNFAIP3-202ENST00000420009 KLRG1Q96E93 195 aa14.07□□□□□ -0.16
TNFAIP3-202ENST00000420009 KDM2BQ8NHM5 1336 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms