RNA–Protein interactions for RNA: ENST00000419616.5

RAD23B-203, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23B, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-203ENST00000419616 COL3A1P02461 1466 aaPredicted RBP25.42■■□□□ 1.66
RAD23B-203ENST00000419616 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
RAD23B-203ENST00000419616 FLAD1Q8NFF5 587 aa25.42■■□□□ 1.66
RAD23B-203ENST00000419616 MTHFSDQ2M296 383 aaKnown RBP25.41■■□□□ 1.66
RAD23B-203ENST00000419616 COL23A1Q86Y22 540 aaPredicted RBP25.41■■□□□ 1.66
RAD23B-203ENST00000419616 ARXQ96QS3 562 aa25.41■■□□□ 1.66
RAD23B-203ENST00000419616 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
RAD23B-203ENST00000419616 PHF14O94880 888 aa25.39■■□□□ 1.66
RAD23B-203ENST00000419616 LINC00116Q8NCU8 138 aa25.39■■□□□ 1.66
RAD23B-203ENST00000419616 KLHL34Q8N239 644 aa25.38■■□□□ 1.65
RAD23B-203ENST00000419616 ITPK1Q13572 414 aa25.37■■□□□ 1.65
RAD23B-203ENST00000419616 SGIP1Q9BQI5 828 aa25.37■■□□□ 1.65
RAD23B-203ENST00000419616 FHDC1Q9C0D6 1143 aaPredicted RBP25.37■■□□□ 1.65
RAD23B-203ENST00000419616 LGR6Q9HBX8 967 aa25.37■■□□□ 1.65
RAD23B-203ENST00000419616 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
RAD23B-203ENST00000419616 PTCD1O75127 700 aaKnown RBP25.36■■□□□ 1.65
RAD23B-203ENST00000419616 U2AF1L5P0DN76 240 aaPredicted RBP25.36■■□□□ 1.65
RAD23B-203ENST00000419616 U2AF1Q01081 240 aaKnown RBP eCLIP25.36■■□□□ 1.65
RAD23B-203ENST00000419616 GNPATO15228 680 aa25.35■■□□□ 1.65
RAD23B-203ENST00000419616 RNMTO43148 476 aaKnown RBP25.35■■□□□ 1.65
RAD23B-203ENST00000419616 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
RAD23B-203ENST00000419616 GAS2L2Q8NHY3 880 aa25.35■■□□□ 1.65
RAD23B-203ENST00000419616 MSL1Q68DK7 614 aa25.34■■□□□ 1.65
RAD23B-203ENST00000419616 SLC52A2Q9HAB3 445 aa25.34■■□□□ 1.65
RAD23B-203ENST00000419616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.33■■□□□ 1.65
RAD23B-203ENST00000419616 PRKAR2BP31323 418 aa25.33■■□□□ 1.65
RAD23B-203ENST00000419616 SYT17Q9BSW7 474 aa25.33■■□□□ 1.65
RAD23B-203ENST00000419616 SSFA2P28290 1259 aa25.32■■□□□ 1.64
RAD23B-203ENST00000419616 SMIM5Q71RC9 77 aa25.31■■□□□ 1.64
RAD23B-203ENST00000419616 GNAT3A8MTJ3 354 aa25.3■■□□□ 1.64
RAD23B-203ENST00000419616 SLC4A9Q96Q91 983 aa25.3■■□□□ 1.64
RAD23B-203ENST00000419616 RTCBQ9Y3I0 505 aaKnown RBP25.3■■□□□ 1.64
RAD23B-203ENST00000419616 VIRMAQ69YN4 1812 aaKnown RBP25.3■■□□□ 1.64
RAD23B-203ENST00000419616 UBR3Q6ZT12 1888 aa25.3■■□□□ 1.64
RAD23B-203ENST00000419616 MAP3K5Q99683 1374 aa25.3■■□□□ 1.64
RAD23B-203ENST00000419616 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
RAD23B-203ENST00000419616 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
RAD23B-203ENST00000419616 TEFQ10587 303 aa25.28■■□□□ 1.64
RAD23B-203ENST00000419616 AMIGO3Q86WK7 504 aa25.28■■□□□ 1.64
RAD23B-203ENST00000419616 ZNF831Q5JPB2 1677 aa25.27■■□□□ 1.64
RAD23B-203ENST00000419616 FCHSD2O94868 740 aa25.27■■□□□ 1.64
RAD23B-203ENST00000419616 NEFMP07197 916 aa25.27■■□□□ 1.64
RAD23B-203ENST00000419616 TRAPPC3LQ5T215 181 aa25.27■■□□□ 1.64
RAD23B-203ENST00000419616 SLC39A6Q13433 755 aa25.26■■□□□ 1.63
RAD23B-203ENST00000419616 PHACTR3Q96KR7 559 aa25.26■■□□□ 1.63
RAD23B-203ENST00000419616 RALBP1Q15311 655 aa25.25■■□□□ 1.63
RAD23B-203ENST00000419616 RC3H1Q5TC82 1133 aaKnown RBP25.25■■□□□ 1.63
RAD23B-203ENST00000419616 COL24A1Q17RW2 1714 aa25.25■■□□□ 1.63
RAD23B-203ENST00000419616 CNTNAP4Q9C0A0 1308 aa25.24■■□□□ 1.63
RAD23B-203ENST00000419616 TTC5Q8N0Z6 440 aa25.24■■□□□ 1.63
RAD23B-203ENST00000419616 MRC1P22897 1456 aa25.23■■□□□ 1.63
RAD23B-203ENST00000419616 RTF1Q92541 710 aaKnown RBP25.23■■□□□ 1.63
RAD23B-203ENST00000419616 COL5A3P25940 1745 aaPredicted RBP25.23■■□□□ 1.63
RAD23B-203ENST00000419616 RFC4P35249 363 aa25.22■■□□□ 1.63
RAD23B-203ENST00000419616 IL17REQ8NFR9 667 aa25.22■■□□□ 1.63
RAD23B-203ENST00000419616 RPS6KA4O75676 772 aa25.21■■□□□ 1.63
RAD23B-203ENST00000419616 CRKLP46109 303 aaKnown RBP25.21■■□□□ 1.63
RAD23B-203ENST00000419616 ADAMTS7Q9UKP4 1686 aa25.2■■□□□ 1.63
RAD23B-203ENST00000419616 ADRA2BP18089 450 aa25.2■■□□□ 1.62
RAD23B-203ENST00000419616 DNAJC10Q8IXB1 793 aa25.19■■□□□ 1.62
RAD23B-203ENST00000419616 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
RAD23B-203ENST00000419616 ARHGEF1Q92888 912 aaKnown RBP25.19■■□□□ 1.62
RAD23B-203ENST00000419616 PNNQ9H307 717 aaKnown RBP25.18■■□□□ 1.62
RAD23B-203ENST00000419616 TJP1Q07157 1748 aa25.17■■□□□ 1.62
RAD23B-203ENST00000419616 GPR162Q16538 588 aa25.17■■□□□ 1.62
RAD23B-203ENST00000419616 BTBD11A6QL63 1104 aa25.15■■□□□ 1.62
RAD23B-203ENST00000419616 VSIG10Q8N0Z9 540 aa25.15■■□□□ 1.62
RAD23B-203ENST00000419616 NLGN1Q8N2Q7 840 aa25.15■■□□□ 1.62
RAD23B-203ENST00000419616 NLGN2Q8NFZ4 835 aa25.15■■□□□ 1.62
RAD23B-203ENST00000419616 CCDC87Q9NVE4 849 aa25.15■■□□□ 1.62
RAD23B-203ENST00000419616 ZNF790Q6PG37 636 aa25.14■■□□□ 1.62
RAD23B-203ENST00000419616 MCM10Q7L590 875 aa25.14■■□□□ 1.62
RAD23B-203ENST00000419616 MYBBP1AQ9BQG0 1328 aaKnown RBP25.13■■□□□ 1.61
RAD23B-203ENST00000419616 MAPK8IP3Q9UPT6 1336 aa25.13■■□□□ 1.61
RAD23B-203ENST00000419616 KCPQ6ZWJ8 1503 aa25.13■■□□□ 1.61
RAD23B-203ENST00000419616 MYH14Q7Z406 1995 aaKnown RBP25.13■■□□□ 1.61
RAD23B-203ENST00000419616 YY1P25490 414 aa25.13■■□□□ 1.61
RAD23B-203ENST00000419616 CD2APQ9Y5K6 639 aa25.13■■□□□ 1.61
RAD23B-203ENST00000419616 CICQ96RK0 1608 aaPredicted RBP25.12■■□□□ 1.61
RAD23B-203ENST00000419616 MMP10P09238 476 aa25.12■■□□□ 1.61
RAD23B-203ENST00000419616 CYP19A1P11511 503 aaPredicted RBP25.12■■□□□ 1.61
RAD23B-203ENST00000419616 INTS5Q6P9B9 1019 aaKnown RBP25.12■■□□□ 1.61
RAD23B-203ENST00000419616 CEMIPQ8WUJ3 1361 aa25.12■■□□□ 1.61
RAD23B-203ENST00000419616 HTATSF1O43719 755 aaKnown RBP25.11■■□□□ 1.61
RAD23B-203ENST00000419616 STARD3NLO95772 234 aa25.11■■□□□ 1.61
RAD23B-203ENST00000419616 FMNL2Q96PY5 1086 aa25.11■■□□□ 1.61
RAD23B-203ENST00000419616 DCTN1Q14203 1278 aa25.1■■□□□ 1.61
RAD23B-203ENST00000419616 ZNF496Q96IT1 587 aaPredicted RBP25.1■■□□□ 1.61
RAD23B-203ENST00000419616 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
RAD23B-203ENST00000419616 UBR2Q8IWV8 1755 aa25.09■■□□□ 1.61
RAD23B-203ENST00000419616 ZPR1O75312 459 aa25.09■■□□□ 1.61
RAD23B-203ENST00000419616 GYS1P13807 737 aa25.09■■□□□ 1.61
RAD23B-203ENST00000419616 TEX13AQ9BXU3 409 aaPredicted RBP25.09■■□□□ 1.61
RAD23B-203ENST00000419616 CANXP27824 592 aaKnown RBP25.08■■□□□ 1.61
RAD23B-203ENST00000419616 SRP68Q9UHB9 627 aaKnown RBP25.08■■□□□ 1.61
RAD23B-203ENST00000419616 PARP3Q9Y6F1 533 aa25.08■■□□□ 1.61
RAD23B-203ENST00000419616 HEG1Q9ULI3 1381 aa25.07■■□□□ 1.6
RAD23B-203ENST00000419616 C4AP0C0L4 1744 aa25.07■■□□□ 1.6
RAD23B-203ENST00000419616 ZBTB1Q9Y2K1 713 aa25.07■■□□□ 1.6
RAD23B-203ENST00000419616 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms