RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
LINC00402-201ENST00000419499 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
LINC00402-201ENST00000419499 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
LINC00402-201ENST00000419499 HOXB7P09629 217 aa12.33□□□□□ -0.44
LINC00402-201ENST00000419499 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
LINC00402-201ENST00000419499 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
LINC00402-201ENST00000419499 PLCH1Q4KWH8 1693 aa12.33□□□□□ -0.44
LINC00402-201ENST00000419499 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
LINC00402-201ENST00000419499 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
LINC00402-201ENST00000419499 EIF4A1P60842 406 aaKnown RBP12.32□□□□□ -0.44
LINC00402-201ENST00000419499 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
LINC00402-201ENST00000419499 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
LINC00402-201ENST00000419499 NPM2Q86SE8 214 aaKnown RBP12.32□□□□□ -0.44
LINC00402-201ENST00000419499 ANKRD44Q8N8A2 993 aa12.32□□□□□ -0.44
LINC00402-201ENST00000419499 TOGARAM1Q9Y4F4 1720 aa12.32□□□□□ -0.44
LINC00402-201ENST00000419499 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
LINC00402-201ENST00000419499 DDRGK1Q96HY6 314 aa12.31□□□□□ -0.44
LINC00402-201ENST00000419499 MEIS3Q99687 375 aa12.31□□□□□ -0.44
LINC00402-201ENST00000419499 DCTPP1Q9H773 170 aa12.31□□□□□ -0.44
LINC00402-201ENST00000419499 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
LINC00402-201ENST00000419499 FLIIQ13045 1269 aa12.3□□□□□ -0.44
LINC00402-201ENST00000419499 CCDC30Q5VVM6 783 aa12.3□□□□□ -0.44
LINC00402-201ENST00000419499 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
LINC00402-201ENST00000419499 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
LINC00402-201ENST00000419499 CCT4P50991 539 aaKnown RBP12.29□□□□□ -0.44
LINC00402-201ENST00000419499 PLEKHO1Q53GL0 409 aaPredicted RBP12.29□□□□□ -0.44
LINC00402-201ENST00000419499 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
LINC00402-201ENST00000419499 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
LINC00402-201ENST00000419499 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
LINC00402-201ENST00000419499 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
LINC00402-201ENST00000419499 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
LINC00402-201ENST00000419499 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
LINC00402-201ENST00000419499 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
LINC00402-201ENST00000419499 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
LINC00402-201ENST00000419499 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
LINC00402-201ENST00000419499 IBTKQ9P2D0 1353 aaPredicted RBP12.28□□□□□ -0.44
LINC00402-201ENST00000419499 F6X3S4 739 aa12.27□□□□□ -0.44
LINC00402-201ENST00000419499 LNPKQ9C0E8 428 aa12.27□□□□□ -0.44
LINC00402-201ENST00000419499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.44
LINC00402-201ENST00000419499 ADCY9O60503 1353 aa12.27□□□□□ -0.45
LINC00402-201ENST00000419499 KCNQ3O43525 872 aa12.27□□□□□ -0.45
LINC00402-201ENST00000419499 ROBO1Q9Y6N7 1651 aa12.27□□□□□ -0.45
LINC00402-201ENST00000419499 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
LINC00402-201ENST00000419499 ZC3H6P61129 1189 aaKnown RBP12.26□□□□□ -0.45
LINC00402-201ENST00000419499 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
LINC00402-201ENST00000419499 SALL3Q9BXA9 1300 aa12.25□□□□□ -0.45
LINC00402-201ENST00000419499 KCPQ6ZWJ8 1503 aa12.25□□□□□ -0.45
LINC00402-201ENST00000419499 COL14A1Q05707 1796 aaKnown RBP12.25□□□□□ -0.45
LINC00402-201ENST00000419499 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
LINC00402-201ENST00000419499 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.25□□□□□ -0.45
LINC00402-201ENST00000419499 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
LINC00402-201ENST00000419499 PHKG2P15735 406 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 CABLES1Q8TDN4 633 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
LINC00402-201ENST00000419499 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 AFDNP55196 1824 aaKnown RBP12.24□□□□□ -0.45
LINC00402-201ENST00000419499 ANKRD45Q5TZF3 282 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 TJP1Q07157 1748 aa12.24□□□□□ -0.45
LINC00402-201ENST00000419499 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
LINC00402-201ENST00000419499 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
LINC00402-201ENST00000419499 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
LINC00402-201ENST00000419499 CHPF2Q9P2E5 772 aa12.23□□□□□ -0.45
LINC00402-201ENST00000419499 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
LINC00402-201ENST00000419499 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 USP44Q9H0E7 712 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 SLAIN2Q9P270 581 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 LRP6O75581 1613 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 WDR17Q8IZU2 1322 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 TEFQ10587 303 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
LINC00402-201ENST00000419499 RBM25P49756 843 aaKnown RBP12.21□□□□□ -0.45
LINC00402-201ENST00000419499 AK9Q5TCS8 1911 aa12.21□□□□□ -0.45
LINC00402-201ENST00000419499 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
LINC00402-201ENST00000419499 GNAI2P04899 355 aa12.21□□□□□ -0.45
LINC00402-201ENST00000419499 BEND3Q5T5X7 828 aa12.21□□□□□ -0.45
LINC00402-201ENST00000419499 ITGB4P16144 1822 aa12.21□□□□□ -0.46
LINC00402-201ENST00000419499 CYP27B1O15528 508 aa12.21□□□□□ -0.46
LINC00402-201ENST00000419499 PDIA6Q15084 440 aa12.21□□□□□ -0.46
LINC00402-201ENST00000419499 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.46
LINC00402-201ENST00000419499 NECTIN2Q92692 538 aa12.21□□□□□ -0.46
LINC00402-201ENST00000419499 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.46
LINC00402-201ENST00000419499 GNAI3P08754 354 aa12.2□□□□□ -0.46
LINC00402-201ENST00000419499 TTC22Q5TAA0 569 aa12.2□□□□□ -0.46
LINC00402-201ENST00000419499 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
LINC00402-201ENST00000419499 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 PRAMEF22A3QJZ6 481 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 CHRNA2Q15822 529 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 PROSER3Q2NL68 480 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
LINC00402-201ENST00000419499 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 POLA2Q14181 598 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
LINC00402-201ENST00000419499 DBF4Q9UBU7 674 aaPredicted RBP12.19□□□□□ -0.46
LINC00402-201ENST00000419499 DISP2A7MBM2 1401 aa12.18□□□□□ -0.46
LINC00402-201ENST00000419499 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
LINC00402-201ENST00000419499 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms