RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MRC1P22897 1456 aa27.25■■□□□ 1.95
GTF3A-202ENST00000419181 PTGER2P43116 358 aa27.24■■□□□ 1.95
GTF3A-202ENST00000419181 ATF5Q9Y2D1 282 aaPredicted RBP27.24■■□□□ 1.95
GTF3A-202ENST00000419181 RSPH6AQ9H0K4 717 aa27.23■■□□□ 1.95
GTF3A-202ENST00000419181 NFATC2IPQ8NCF5 419 aa27.22■■□□□ 1.95
GTF3A-202ENST00000419181 COL24A1Q17RW2 1714 aa27.21■■□□□ 1.95
GTF3A-202ENST00000419181 LGR6Q9HBX8 967 aa27.21■■□□□ 1.95
GTF3A-202ENST00000419181 UBR3Q6ZT12 1888 aa27.21■■□□□ 1.95
GTF3A-202ENST00000419181 RNMTO43148 476 aaKnown RBP27.2■■□□□ 1.94
GTF3A-202ENST00000419181 U2AF1L5P0DN76 240 aaPredicted RBP27.2■■□□□ 1.94
GTF3A-202ENST00000419181 PRKAR2BP31323 418 aa27.2■■□□□ 1.94
GTF3A-202ENST00000419181 U2AF1Q01081 240 aaKnown RBP eCLIP27.2■■□□□ 1.94
GTF3A-202ENST00000419181 ITPK1Q13572 414 aa27.2■■□□□ 1.94
GTF3A-202ENST00000419181 RALBP1Q15311 655 aa27.2■■□□□ 1.94
GTF3A-202ENST00000419181 SLC16A10Q8TF71 515 aa27.2■■□□□ 1.94
GTF3A-202ENST00000419181 SGIP1Q9BQI5 828 aa27.2■■□□□ 1.94
GTF3A-202ENST00000419181 ATP6V1AP38606 617 aa27.19■■□□□ 1.94
GTF3A-202ENST00000419181 LINC00116Q8NCU8 138 aa27.19■■□□□ 1.94
GTF3A-202ENST00000419181 GAS2L2Q8NHY3 880 aa27.19■■□□□ 1.94
GTF3A-202ENST00000419181 SLC52A2Q9HAB3 445 aa27.19■■□□□ 1.94
GTF3A-202ENST00000419181 SLC4A9Q96Q91 983 aa27.18■■□□□ 1.94
GTF3A-202ENST00000419181 MAP3K5Q99683 1374 aa27.18■■□□□ 1.94
GTF3A-202ENST00000419181 COL5A3P25940 1745 aaPredicted RBP27.18■■□□□ 1.94
GTF3A-202ENST00000419181 COL23A1Q86Y22 540 aaPredicted RBP27.17■■□□□ 1.94
GTF3A-202ENST00000419181 PHACTR3Q96KR7 559 aa27.17■■□□□ 1.94
GTF3A-202ENST00000419181 FCHSD2O94868 740 aa27.16■■□□□ 1.94
GTF3A-202ENST00000419181 AK7Q96M32 723 aa27.16■■□□□ 1.94
GTF3A-202ENST00000419181 RBM42Q9BTD8 480 aaKnown RBP27.16■■□□□ 1.94
GTF3A-202ENST00000419181 CICQ96RK0 1608 aaPredicted RBP27.16■■□□□ 1.94
GTF3A-202ENST00000419181 GNAT3A8MTJ3 354 aa27.14■■□□□ 1.94
GTF3A-202ENST00000419181 AMIGO3Q86WK7 504 aa27.14■■□□□ 1.94
GTF3A-202ENST00000419181 FLAD1Q8NFF5 587 aa27.14■■□□□ 1.94
GTF3A-202ENST00000419181 SIPA1L3O60292 1781 aaPredicted RBP27.12■■□□□ 1.93
GTF3A-202ENST00000419181 TJP1Q07157 1748 aa27.11■■□□□ 1.93
GTF3A-202ENST00000419181 MSH5O43196 834 aa27.11■■□□□ 1.93
GTF3A-202ENST00000419181 PTCD1O75127 700 aaKnown RBP27.11■■□□□ 1.93
GTF3A-202ENST00000419181 IL17REQ8NFR9 667 aa27.1■■□□□ 1.93
GTF3A-202ENST00000419181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.09■■□□□ 1.93
GTF3A-202ENST00000419181 SSFA2P28290 1259 aa27.09■■□□□ 1.93
GTF3A-202ENST00000419181 MYBBP1AQ9BQG0 1328 aaKnown RBP27.09■■□□□ 1.93
GTF3A-202ENST00000419181 UBR2Q8IWV8 1755 aa27.09■■□□□ 1.93
GTF3A-202ENST00000419181 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
GTF3A-202ENST00000419181 KCPQ6ZWJ8 1503 aa27.08■■□□□ 1.93
GTF3A-202ENST00000419181 GNPATO15228 680 aa27.08■■□□□ 1.93
GTF3A-202ENST00000419181 ARXQ96QS3 562 aa27.08■■□□□ 1.93
GTF3A-202ENST00000419181 MYH14Q7Z406 1995 aaKnown RBP27.08■■□□□ 1.92
GTF3A-202ENST00000419181 DCAF8L1A6NGE4 600 aa27.07■■□□□ 1.92
GTF3A-202ENST00000419181 PHF14O94880 888 aa27.07■■□□□ 1.92
GTF3A-202ENST00000419181 SMIM5Q71RC9 77 aa27.07■■□□□ 1.92
GTF3A-202ENST00000419181 CNTNAP4Q9C0A0 1308 aa27.07■■□□□ 1.92
GTF3A-202ENST00000419181 POLD1P28340 1107 aa27.06■■□□□ 1.92
GTF3A-202ENST00000419181 SLC39A6Q13433 755 aa27.06■■□□□ 1.92
GTF3A-202ENST00000419181 RC3H1Q5TC82 1133 aaKnown RBP27.06■■□□□ 1.92
GTF3A-202ENST00000419181 TEFQ10587 303 aa27.05■■□□□ 1.92
GTF3A-202ENST00000419181 FHDC1Q9C0D6 1143 aaPredicted RBP27.05■■□□□ 1.92
GTF3A-202ENST00000419181 MSL1Q68DK7 614 aa27.02■■□□□ 1.92
GTF3A-202ENST00000419181 PLEKHF1Q96S99 279 aa27.02■■□□□ 1.92
GTF3A-202ENST00000419181 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
GTF3A-202ENST00000419181 RTCBQ9Y3I0 505 aaKnown RBP27.02■■□□□ 1.92
GTF3A-202ENST00000419181 DLG5Q8TDM6 1919 aa27.01■■□□□ 1.91
GTF3A-202ENST00000419181 SYT17Q9BSW7 474 aa27.01■■□□□ 1.91
GTF3A-202ENST00000419181 CRKLP46109 303 aaKnown RBP27■■□□□ 1.91
GTF3A-202ENST00000419181 RPS6KA4O75676 772 aa26.99■■□□□ 1.91
GTF3A-202ENST00000419181 NEFMP07197 916 aa26.99■■□□□ 1.91
GTF3A-202ENST00000419181 DNAJC10Q8IXB1 793 aa26.99■■□□□ 1.91
GTF3A-202ENST00000419181 RTF1Q92541 710 aaKnown RBP26.99■■□□□ 1.91
GTF3A-202ENST00000419181 C4AP0C0L4 1744 aa26.99■■□□□ 1.91
GTF3A-202ENST00000419181 HTATSF1O43719 755 aaKnown RBP26.98■■□□□ 1.91
GTF3A-202ENST00000419181 ADRA2BP18089 450 aa26.98■■□□□ 1.91
GTF3A-202ENST00000419181 ZNF790Q6PG37 636 aa26.98■■□□□ 1.91
GTF3A-202ENST00000419181 TTC5Q8N0Z6 440 aa26.98■■□□□ 1.91
GTF3A-202ENST00000419181 VSIG10Q8N0Z9 540 aa26.98■■□□□ 1.91
GTF3A-202ENST00000419181 TRAPPC3LQ5T215 181 aa26.97■■□□□ 1.91
GTF3A-202ENST00000419181 MCM10Q7L590 875 aa26.97■■□□□ 1.91
GTF3A-202ENST00000419181 KLHL34Q8N239 644 aa26.97■■□□□ 1.91
GTF3A-202ENST00000419181 PNNQ9H307 717 aaKnown RBP26.97■■□□□ 1.91
GTF3A-202ENST00000419181 ZNF316A6NFI3 1004 aaPredicted RBP26.96■■□□□ 1.91
GTF3A-202ENST00000419181 INTS5Q6P9B9 1019 aaKnown RBP26.95■■□□□ 1.9
GTF3A-202ENST00000419181 CYP19A1P11511 503 aaPredicted RBP26.94■■□□□ 1.9
GTF3A-202ENST00000419181 DCTN1Q14203 1278 aa26.94■■□□□ 1.9
GTF3A-202ENST00000419181 ARHGEF1Q92888 912 aaKnown RBP26.94■■□□□ 1.9
GTF3A-202ENST00000419181 ZNF496Q96IT1 587 aaPredicted RBP26.94■■□□□ 1.9
GTF3A-202ENST00000419181 MAPK8IP3Q9UPT6 1336 aa26.93■■□□□ 1.9
GTF3A-202ENST00000419181 NFE2L2Q16236 605 aa26.93■■□□□ 1.9
GTF3A-202ENST00000419181 CCDC87Q9NVE4 849 aa26.93■■□□□ 1.9
GTF3A-202ENST00000419181 HEG1Q9ULI3 1381 aa26.93■■□□□ 1.9
GTF3A-202ENST00000419181 BTBD11A6QL63 1104 aa26.92■■□□□ 1.9
GTF3A-202ENST00000419181 RFC4P35249 363 aa26.9■■□□□ 1.9
GTF3A-202ENST00000419181 KCNQ3O43525 872 aa26.89■■□□□ 1.9
GTF3A-202ENST00000419181 FMNL2Q96PY5 1086 aa26.89■■□□□ 1.9
GTF3A-202ENST00000419181 SOS1Q07889 1333 aaPredicted RBP26.89■■□□□ 1.89
GTF3A-202ENST00000419181 GYS1P13807 737 aa26.87■■□□□ 1.89
GTF3A-202ENST00000419181 ZBTB1Q9Y2K1 713 aa26.87■■□□□ 1.89
GTF3A-202ENST00000419181 STARD3NLO95772 234 aa26.86■■□□□ 1.89
GTF3A-202ENST00000419181 YY1P25490 414 aa26.86■■□□□ 1.89
GTF3A-202ENST00000419181 NLGN1Q8N2Q7 840 aa26.86■■□□□ 1.89
GTF3A-202ENST00000419181 TEX13AQ9BXU3 409 aaPredicted RBP26.86■■□□□ 1.89
GTF3A-202ENST00000419181 USP42Q9H9J4 1324 aaKnown RBP26.86■■□□□ 1.89
GTF3A-202ENST00000419181 WDR43Q15061 677 aaKnown RBP eCLIP26.85■■□□□ 1.89
GTF3A-202ENST00000419181 TAF7Q15545 349 aaPredicted RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms