RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 NFATC2IPQ8NCF5 419 aa21.43■■□□□ 1.02
NDUFA3-206ENST00000419113 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
NDUFA3-206ENST00000419113 ZNF521Q96K83 1311 aa21.42■■□□□ 1.02
NDUFA3-206ENST00000419113 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
NDUFA3-206ENST00000419113 PAPPAQ13219 1627 aa21.41■■□□□ 1.02
NDUFA3-206ENST00000419113 SENP3-EIF4A1A0A087X0R7 540 aa21.41■■□□□ 1.02
NDUFA3-206ENST00000419113 GNAI1P63096 354 aa21.41■■□□□ 1.02
NDUFA3-206ENST00000419113 IFT57Q9NWB7 429 aa21.41■■□□□ 1.02
NDUFA3-206ENST00000419113 BTBD11A6QL63 1104 aa21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 TRIM37O94972 964 aa21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 PIGBQ92521 554 aa21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 SMARCC1Q92922 1105 aaPredicted RBP21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 KDM3BQ7LBC6 1761 aa21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 TNS1Q9HBL0 1735 aaKnown RBP21.4■■□□□ 1.02
NDUFA3-206ENST00000419113 KCNQ2O43526 872 aa21.39■■□□□ 1.01
NDUFA3-206ENST00000419113 GOLGA2Q08379 1002 aa21.39■■□□□ 1.01
NDUFA3-206ENST00000419113 CCDC125Q86Z20 511 aa21.39■■□□□ 1.01
NDUFA3-206ENST00000419113 SF3B2Q13435 895 aaKnown RBP21.37■■□□□ 1.01
NDUFA3-206ENST00000419113 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
NDUFA3-206ENST00000419113 RGPD3A6NKT7 1758 aaPredicted RBP21.37■■□□□ 1.01
NDUFA3-206ENST00000419113 RGPD4Q7Z3J3 1758 aa21.37■■□□□ 1.01
NDUFA3-206ENST00000419113 UBR2Q8IWV8 1755 aa21.37■■□□□ 1.01
NDUFA3-206ENST00000419113 CHL1O00533 1208 aa21.36■■□□□ 1.01
NDUFA3-206ENST00000419113 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
NDUFA3-206ENST00000419113 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
NDUFA3-206ENST00000419113 E9PSI1 815 aa21.35■■□□□ 1.01
NDUFA3-206ENST00000419113 ZNF853P0CG23 659 aa21.35■■□□□ 1.01
NDUFA3-206ENST00000419113 ZNF790Q6PG37 636 aa21.35■■□□□ 1.01
NDUFA3-206ENST00000419113 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
NDUFA3-206ENST00000419113 HMGB2P26583 209 aaKnown RBP21.34■■□□□ 1.01
NDUFA3-206ENST00000419113 ATG3Q9NT62 314 aa21.34■■□□□ 1.01
NDUFA3-206ENST00000419113 LY75O60449 1722 aa21.34■■□□□ 1.01
NDUFA3-206ENST00000419113 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
NDUFA3-206ENST00000419113 PALLDQ8WX93 1383 aa21.33■■□□□ 1
NDUFA3-206ENST00000419113 PLSCR1O15162 318 aa21.32■■□□□ 1
NDUFA3-206ENST00000419113 APBA3O96018 575 aa21.32■■□□□ 1
NDUFA3-206ENST00000419113 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
NDUFA3-206ENST00000419113 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
NDUFA3-206ENST00000419113 EP400Q96L91 3159 aa21.32■■□□□ 1
NDUFA3-206ENST00000419113 SLC39A6Q13433 755 aa21.31■■□□□ 1
NDUFA3-206ENST00000419113 ILDR2Q71H61 639 aa21.31■■□□□ 1
NDUFA3-206ENST00000419113 PTF1AQ7RTS3 328 aa21.31■■□□□ 1
NDUFA3-206ENST00000419113 FMNL2Q96PY5 1086 aa21.31■■□□□ 1
NDUFA3-206ENST00000419113 MBIPQ9NS73 344 aa21.31■■□□□ 1
NDUFA3-206ENST00000419113 KCPQ6ZWJ8 1503 aa21.3■■□□□ 1
NDUFA3-206ENST00000419113 BAG6P46379 1132 aa21.3■■□□□ 1
NDUFA3-206ENST00000419113 SLFN5Q08AF3 891 aa21.3■■□□□ 1
NDUFA3-206ENST00000419113 MIS18AQ9NYP9 233 aa21.3■■□□□ 1
NDUFA3-206ENST00000419113 CICQ96RK0 1608 aaPredicted RBP21.29■■□□□ 1
NDUFA3-206ENST00000419113 VSIG10Q8N0Z9 540 aa21.29■■□□□ 1
NDUFA3-206ENST00000419113 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
NDUFA3-206ENST00000419113 SOS1Q07889 1333 aaPredicted RBP21.28■■□□□ 1
NDUFA3-206ENST00000419113 FANCIQ9NVI1 1328 aa21.28■■□□□ 1
NDUFA3-206ENST00000419113 HEG1Q9ULI3 1381 aa21.27■■□□□ 1
NDUFA3-206ENST00000419113 SLC27A3Q5K4L6 730 aa21.27■■□□□ 1
NDUFA3-206ENST00000419113 RBM42Q9BTD8 480 aaKnown RBP21.27■■□□□ 1
NDUFA3-206ENST00000419113 LOC102724428A0A0B4J2F2 783 aa21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 KCNQ3O43525 872 aa21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 PTCD1O75127 700 aaKnown RBP21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 SIK1P57059 783 aa21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 UPF1Q92900 1129 aaKnown RBP eCLIP21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 TEX13AQ9BXU3 409 aaPredicted RBP21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 CHMP4AQ9BY43 222 aa21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 SPINK5Q9NQ38 1064 aaPredicted RBP21.26■□□□□ 0.99
NDUFA3-206ENST00000419113 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
NDUFA3-206ENST00000419113 HOXB7P09629 217 aa21.25■□□□□ 0.99
NDUFA3-206ENST00000419113 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
NDUFA3-206ENST00000419113 TRMT2AQ8IZ69 625 aaKnown RBP21.25■□□□□ 0.99
NDUFA3-206ENST00000419113 TSR2Q969E8 191 aaKnown RBP21.25■□□□□ 0.99
NDUFA3-206ENST00000419113 CDCA7LQ96GN5 454 aa21.24■□□□□ 0.99
NDUFA3-206ENST00000419113 TAF1LQ8IZX4 1826 aa21.23■□□□□ 0.99
NDUFA3-206ENST00000419113 ATP6V1AP38606 617 aa21.23■□□□□ 0.99
NDUFA3-206ENST00000419113 CCNL1Q9UK58 526 aaPredicted RBP21.23■□□□□ 0.99
NDUFA3-206ENST00000419113 TJP1Q07157 1748 aa21.23■□□□□ 0.99
NDUFA3-206ENST00000419113 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
NDUFA3-206ENST00000419113 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
NDUFA3-206ENST00000419113 C5P01031 1676 aa21.21■□□□□ 0.99
NDUFA3-206ENST00000419113 RREB1Q92766 1687 aa21.21■□□□□ 0.99
NDUFA3-206ENST00000419113 COL5A3P25940 1745 aaPredicted RBP21.21■□□□□ 0.99
NDUFA3-206ENST00000419113 GIGYF1O75420 1035 aaPredicted RBP21.21■□□□□ 0.99
NDUFA3-206ENST00000419113 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
NDUFA3-206ENST00000419113 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
NDUFA3-206ENST00000419113 STARD3NLO95772 234 aa21.19■□□□□ 0.98
NDUFA3-206ENST00000419113 EN1Q05925 392 aaPredicted RBP21.19■□□□□ 0.98
NDUFA3-206ENST00000419113 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
NDUFA3-206ENST00000419113 TWISTNBQ3B726 338 aaPredicted RBP21.18■□□□□ 0.98
NDUFA3-206ENST00000419113 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
NDUFA3-206ENST00000419113 EZH2Q15910 746 aaKnown RBP21.17■□□□□ 0.98
NDUFA3-206ENST00000419113 DNAJC10Q8IXB1 793 aa21.17■□□□□ 0.98
NDUFA3-206ENST00000419113 C8orf58Q8NAV2 365 aa21.17■□□□□ 0.98
NDUFA3-206ENST00000419113 ZNF428Q96B54 188 aa21.17■□□□□ 0.98
NDUFA3-206ENST00000419113 CACNA1FO60840 1977 aa21.16■□□□□ 0.98
NDUFA3-206ENST00000419113 ERBB4Q15303 1308 aa21.16■□□□□ 0.98
NDUFA3-206ENST00000419113 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
NDUFA3-206ENST00000419113 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
NDUFA3-206ENST00000419113 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
NDUFA3-206ENST00000419113 ITPK1Q13572 414 aa21.15■□□□□ 0.98
NDUFA3-206ENST00000419113 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms