RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
DDR1-232ENST00000418800 WDR33Q9C0J8 1336 aaKnown RBP14□□□□□ -0.17
DDR1-232ENST00000418800 PDE1AP54750 535 aa14□□□□□ -0.17
DDR1-232ENST00000418800 TFIP11Q9UBB9 837 aaKnown RBP14□□□□□ -0.17
DDR1-232ENST00000418800 EIF2AK4Q9P2K8 1649 aaKnown RBP14□□□□□ -0.17
DDR1-232ENST00000418800 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
DDR1-232ENST00000418800 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 RPAP2Q8IXW5 612 aaPredicted RBP13.99□□□□□ -0.17
DDR1-232ENST00000418800 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 SYNMO15061 1565 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 CEP85Q6P2H3 762 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 BICD2Q8TD16 824 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 LRRCC1Q9C099 1032 aa13.99□□□□□ -0.17
DDR1-232ENST00000418800 ARAP3Q8WWN8 1544 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 CCDC186Q7Z3E2 898 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 ANKRD44Q8N8A2 993 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 ABCC1P33527 1531 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 LRMPQ12912 555 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 MX1P20591 662 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 G2E3Q7L622 706 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
DDR1-232ENST00000418800 GTF2F1P35269 517 aaKnown RBP eCLIP13.97□□□□□ -0.178e-7■■■■□ 24.7
DDR1-232ENST00000418800 DNM1Q05193 864 aaKnown RBP13.97□□□□□ -0.17
DDR1-232ENST00000418800 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
DDR1-232ENST00000418800 CCDC183Q5T5S1 534 aa13.97□□□□□ -0.17
DDR1-232ENST00000418800 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
DDR1-232ENST00000418800 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
DDR1-232ENST00000418800 GNAI2P04899 355 aa13.97□□□□□ -0.17
DDR1-232ENST00000418800 TRIM34Q9BYJ4 488 aa13.97□□□□□ -0.17
DDR1-232ENST00000418800 SRCIN1Q9C0H9 1055 aa13.97□□□□□ -0.17
DDR1-232ENST00000418800 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
DDR1-232ENST00000418800 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
DDR1-232ENST00000418800 IL16Q14005 1332 aa13.96□□□□□ -0.17
DDR1-232ENST00000418800 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
DDR1-232ENST00000418800 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.18
DDR1-232ENST00000418800 TMX1Q9H3N1 280 aa13.95□□□□□ -0.18
DDR1-232ENST00000418800 IBTKQ9P2D0 1353 aaPredicted RBP13.95□□□□□ -0.18
DDR1-232ENST00000418800 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
DDR1-232ENST00000418800 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
DDR1-232ENST00000418800 ANKRD36BQ8N2N9 1353 aa13.95□□□□□ -0.18
DDR1-232ENST00000418800 FOXO3O43524 673 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 MCM2P49736 904 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 JAKMIP1Q96N16 626 aaKnown RBP13.94□□□□□ -0.18
DDR1-232ENST00000418800 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 ATP6V1DQ9Y5K8 247 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 KDM4AO75164 1064 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 LUZP1Q86V48 1076 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 TIGD1Q96MW7 591 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 LRRFIP2Q9Y608 721 aaKnown RBP13.94□□□□□ -0.18
DDR1-232ENST00000418800 STX6O43752 255 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
DDR1-232ENST00000418800 SKIDA1Q1XH10 827 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
DDR1-232ENST00000418800 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
DDR1-232ENST00000418800 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 ARHGAP45Q92619 1136 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 GOLGA6L19H0YKK7 550 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 BRD1O95696 1058 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 TMEM51Q9NW97 253 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 BECN2A8MW95 431 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 CCDC192P0DO97 292 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 ATP10AO60312 1499 aa13.93□□□□□ -0.18
DDR1-232ENST00000418800 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 UBTFL1P0CB47 393 aaPredicted RBP13.92□□□□□ -0.18
DDR1-232ENST00000418800 TAF3Q5VWG9 929 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
DDR1-232ENST00000418800 CCAR2Q8N163 923 aaKnown RBP13.92□□□□□ -0.18
DDR1-232ENST00000418800 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 ZMYM3Q14202 1370 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 SYT1P21579 422 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 TNMDQ9H2S6 317 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 MAP3K4Q9Y6R4 1608 aa13.92□□□□□ -0.18
DDR1-232ENST00000418800 MSH6P52701 1360 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 GJB2P29033 226 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.91□□□□□ -0.18
DDR1-232ENST00000418800 AMPHP49418 695 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 ST7Q9NRC1 585 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 NRBP1Q9UHY1 535 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
DDR1-232ENST00000418800 MAST1Q9Y2H9 1570 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
DDR1-232ENST00000418800 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
DDR1-232ENST00000418800 ANXA1P04083 346 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 CHMLP26374 656 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 AK2P54819 239 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 DDX11Q96FC9 970 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 H3BQV1 296 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 SRGAP3O43295 1099 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 ZSCAN22P10073 491 aaPredicted RBP13.9□□□□□ -0.18
DDR1-232ENST00000418800 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms