RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 RNMTO43148 476 aaKnown RBP11.43□□□□□ -0.58
LINCMD1-201ENST00000418518 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
LINCMD1-201ENST00000418518 CHMP4AQ9BY43 222 aa11.43□□□□□ -0.58
LINCMD1-201ENST00000418518 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
LINCMD1-201ENST00000418518 PAPPAQ13219 1627 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 UBR2Q8IWV8 1755 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 ZC3H6P61129 1189 aaKnown RBP11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 NUCB1Q02818 461 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 SLAIN2Q9P270 581 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 COL5A2P05997 1499 aaPredicted RBP11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 WNK3Q9BYP7 1800 aa11.42□□□□□ -0.58
LINCMD1-201ENST00000418518 PLCH1Q4KWH8 1693 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 CCT4P50991 539 aaKnown RBP11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 G2E3Q7L622 706 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 STK31Q9BXU1 1019 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 LTBP4Q8N2S1 1624 aa11.41□□□□□ -0.58
LINCMD1-201ENST00000418518 ROBO1Q9Y6N7 1651 aa11.4□□□□□ -0.58
LINCMD1-201ENST00000418518 ANKRD44Q8N8A2 993 aa11.4□□□□□ -0.58
LINCMD1-201ENST00000418518 COL14A1Q05707 1796 aaKnown RBP11.4□□□□□ -0.58
LINCMD1-201ENST00000418518 TEFQ10587 303 aa11.39□□□□□ -0.59
LINCMD1-201ENST00000418518 FLIIQ13045 1269 aa11.39□□□□□ -0.59
LINCMD1-201ENST00000418518 TATP17735 454 aaPredicted RBP11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 RAPGEF4Q8WZA2 1011 aa11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 SPG7Q9UQ90 795 aa11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 IBTKQ9P2D0 1353 aaPredicted RBP11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
LINCMD1-201ENST00000418518 WDR17Q8IZU2 1322 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 BTBD11A6QL63 1104 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 PHKG2P15735 406 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 NLRP2Q9NX02 1062 aa11.37□□□□□ -0.59
LINCMD1-201ENST00000418518 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
LINCMD1-201ENST00000418518 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
LINCMD1-201ENST00000418518 MEIS3Q99687 375 aa11.36□□□□□ -0.59
LINCMD1-201ENST00000418518 DCTPP1Q9H773 170 aa11.36□□□□□ -0.59
LINCMD1-201ENST00000418518 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
LINCMD1-201ENST00000418518 CHRNA2Q15822 529 aa11.35□□□□□ -0.59
LINCMD1-201ENST00000418518 IFNL2Q8IZJ0 200 aa11.35□□□□□ -0.59
LINCMD1-201ENST00000418518 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
LINCMD1-201ENST00000418518 F6X3S4 739 aa11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 KCNQ3O43525 872 aa11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 GNAI3P08754 354 aa11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 FKBP5Q13451 457 aaPredicted RBP11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 LRP6O75581 1613 aa11.34□□□□□ -0.59
LINCMD1-201ENST00000418518 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.59
LINCMD1-201ENST00000418518 CYP27B1O15528 508 aa11.33□□□□□ -0.6
LINCMD1-201ENST00000418518 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
LINCMD1-201ENST00000418518 BMP2KLQ5H9B9 411 aa11.33□□□□□ -0.6
LINCMD1-201ENST00000418518 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
LINCMD1-201ENST00000418518 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
LINCMD1-201ENST00000418518 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
LINCMD1-201ENST00000418518 ITGB4P16144 1822 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 ADCY9O60503 1353 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 HMMRO75330 724 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 GNAI2P04899 355 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 ANP32EQ9BTT0 268 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
LINCMD1-201ENST00000418518 KCPQ6ZWJ8 1503 aa11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 ANKRD45Q5TZF3 282 aa11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
LINCMD1-201ENST00000418518 NWD2Q9ULI1 1742 aa11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 SEC24BO95487 1268 aa11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 TBC1D32Q96NH3 1257 aa11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 HYPKQ9NX55 129 aa11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 AK9Q5TCS8 1911 aa11.3□□□□□ -0.6
LINCMD1-201ENST00000418518 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms