RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
HMGA1P6-201ENST00000418454 PLCH1Q4KWH8 1693 aa12.92□□□□□ -0.34
HMGA1P6-201ENST00000418454 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
HMGA1P6-201ENST00000418454 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
HMGA1P6-201ENST00000418454 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
HMGA1P6-201ENST00000418454 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
HMGA1P6-201ENST00000418454 ZNF790Q6PG37 636 aa12.9□□□□□ -0.34
HMGA1P6-201ENST00000418454 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
HMGA1P6-201ENST00000418454 NGLY1Q96IV0 654 aa12.9□□□□□ -0.34
HMGA1P6-201ENST00000418454 STK31Q9BXU1 1019 aa12.9□□□□□ -0.34
HMGA1P6-201ENST00000418454 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
HMGA1P6-201ENST00000418454 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 NRAPQ86VF7 1730 aa12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 HSPA1LP34931 641 aa12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 CABP4P57796 275 aa12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
HMGA1P6-201ENST00000418454 LRP6O75581 1613 aa12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 PLIN1O60240 522 aa12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
HMGA1P6-201ENST00000418454 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 TRIM27P14373 513 aa12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 TNS2Q63HR2 1409 aa12.87□□□□□ -0.35
HMGA1P6-201ENST00000418454 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 DDB1Q16531 1140 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 TTC5Q8N0Z6 440 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 USP21Q9UK80 565 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 ABCC4O15439 1325 aa12.86□□□□□ -0.35
HMGA1P6-201ENST00000418454 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
HMGA1P6-201ENST00000418454 INTS3Q68E01 1043 aaKnown RBP12.85□□□□□ -0.35
HMGA1P6-201ENST00000418454 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
HMGA1P6-201ENST00000418454 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
HMGA1P6-201ENST00000418454 BCL9O00512 1426 aa12.85□□□□□ -0.35
HMGA1P6-201ENST00000418454 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
HMGA1P6-201ENST00000418454 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
HMGA1P6-201ENST00000418454 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
HMGA1P6-201ENST00000418454 C8orf37Q96NL8 207 aa12.84□□□□□ -0.35
HMGA1P6-201ENST00000418454 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
HMGA1P6-201ENST00000418454 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
HMGA1P6-201ENST00000418454 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
HMGA1P6-201ENST00000418454 MEX3CQ5U5Q3 659 aaKnown RBP12.82□□□□□ -0.36
HMGA1P6-201ENST00000418454 GJD4Q96KN9 370 aaPredicted RBP12.82□□□□□ -0.36
HMGA1P6-201ENST00000418454 DDX21Q9NR30 783 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGA1P6-201ENST00000418454 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 HDAC5Q9UQL6 1122 aa12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 WNK3Q9BYP7 1800 aa12.81□□□□□ -0.36
HMGA1P6-201ENST00000418454 ATRNO75882 1429 aa12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 RLBP1P12271 317 aa12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 FLIIQ13045 1269 aa12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 CCDC9Q9Y3X0 531 aaKnown RBP12.8□□□□□ -0.36
HMGA1P6-201ENST00000418454 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
HMGA1P6-201ENST00000418454 KCNQ3O43525 872 aa12.79□□□□□ -0.36
HMGA1P6-201ENST00000418454 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
HMGA1P6-201ENST00000418454 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
HMGA1P6-201ENST00000418454 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
HMGA1P6-201ENST00000418454 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
HMGA1P6-201ENST00000418454 HDAC1Q13547 482 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P6-201ENST00000418454 ZNF772Q68DY9 489 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P6-201ENST00000418454 PIGBQ92521 554 aa12.78□□□□□ -0.36
HMGA1P6-201ENST00000418454 AFF2P51816 1311 aa12.78□□□□□ -0.36
HMGA1P6-201ENST00000418454 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
HMGA1P6-201ENST00000418454 PAPPAQ13219 1627 aa12.77□□□□□ -0.36
HMGA1P6-201ENST00000418454 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
HMGA1P6-201ENST00000418454 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
HMGA1P6-201ENST00000418454 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
HMGA1P6-201ENST00000418454 RGS12O14924 1447 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms