RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 RGPD1P0DJD0 1748 aa15.7■□□□□ 0.1
LRRTM1-205ENST00000417012 CHL1O00533 1208 aa15.7■□□□□ 0.1
LRRTM1-205ENST00000417012 OTUD7AQ8TE49 926 aaPredicted RBP15.7■□□□□ 0.1
LRRTM1-205ENST00000417012 EYA1Q99502 592 aa15.7■□□□□ 0.1
LRRTM1-205ENST00000417012 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
LRRTM1-205ENST00000417012 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
LRRTM1-205ENST00000417012 APBB1O00213 710 aa15.69■□□□□ 0.1
LRRTM1-205ENST00000417012 PKP1Q13835 747 aa15.69■□□□□ 0.1
LRRTM1-205ENST00000417012 FMN2Q9NZ56 1722 aa15.69■□□□□ 0.1
LRRTM1-205ENST00000417012 MSH6P52701 1360 aa15.69■□□□□ 0.1
LRRTM1-205ENST00000417012 KIAA1211Q6ZU35 1233 aa15.69■□□□□ 0.1
LRRTM1-205ENST00000417012 FLT4P35916 1363 aa15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 LTV1Q96GA3 475 aaPredicted RBP15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 SBNO1A3KN83 1393 aa15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 SMARCA5O60264 1052 aaPredicted RBP15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 RGS12O14924 1447 aa15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 ZGPATQ8N5A5 531 aaKnown RBP15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
LRRTM1-205ENST00000417012 CEP170BQ9Y4F5 1589 aaPredicted RBP15.67■□□□□ 0.1
LRRTM1-205ENST00000417012 PTPRCP08575 1304 aa15.67■□□□□ 0.1
LRRTM1-205ENST00000417012 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
LRRTM1-205ENST00000417012 ERC2O15083 957 aa15.67■□□□□ 0.1
LRRTM1-205ENST00000417012 PRPF40AO75400 957 aaKnown RBP15.67■□□□□ 0.1
LRRTM1-205ENST00000417012 OFD1O75665 1012 aa15.66■□□□□ 0.1
LRRTM1-205ENST00000417012 ARHGEF10O15013 1369 aa15.66■□□□□ 0.1
LRRTM1-205ENST00000417012 HMMRO75330 724 aa15.66■□□□□ 0.1
LRRTM1-205ENST00000417012 RTF1Q92541 710 aaKnown RBP15.66■□□□□ 0.1
LRRTM1-205ENST00000417012 CRB1P82279 1406 aa15.66■□□□□ 0.1
LRRTM1-205ENST00000417012 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
LRRTM1-205ENST00000417012 MEIS3Q99687 375 aa15.65■□□□□ 0.1
LRRTM1-205ENST00000417012 RBSNQ9H1K0 784 aa15.65■□□□□ 0.1
LRRTM1-205ENST00000417012 KIAA0232Q92628 1395 aa15.65■□□□□ 0.1
LRRTM1-205ENST00000417012 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
LRRTM1-205ENST00000417012 TSPYL4Q9UJ04 414 aa15.65■□□□□ 0.1
LRRTM1-205ENST00000417012 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
LRRTM1-205ENST00000417012 HOXC9P31274 260 aa15.64■□□□□ 0.09
LRRTM1-205ENST00000417012 GPT2Q8TD30 523 aa15.64■□□□□ 0.09
LRRTM1-205ENST00000417012 IGSF1Q8N6C5 1336 aa15.64■□□□□ 0.09
LRRTM1-205ENST00000417012 USHBP1Q8N6Y0 703 aa15.63■□□□□ 0.09
LRRTM1-205ENST00000417012 RBM27Q9P2N5 1060 aaKnown RBP15.63■□□□□ 0.09
LRRTM1-205ENST00000417012 PDLIM2Q96JY6 352 aa15.63■□□□□ 0.09
LRRTM1-205ENST00000417012 ZDHHC9Q9Y397 364 aa15.63■□□□□ 0.09
LRRTM1-205ENST00000417012 KDRP35968 1356 aa15.62■□□□□ 0.09
LRRTM1-205ENST00000417012 NOL7Q9UMY1 257 aaKnown RBP15.62■□□□□ 0.09
LRRTM1-205ENST00000417012 MARF1Q9Y4F3 1742 aaKnown RBP15.62■□□□□ 0.09
LRRTM1-205ENST00000417012 ZBTB7CA1YPR0 619 aa15.62■□□□□ 0.09
LRRTM1-205ENST00000417012 G2E3Q7L622 706 aa15.62■□□□□ 0.09
LRRTM1-205ENST00000417012 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
LRRTM1-205ENST00000417012 MBD3O95983 291 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 TERF1P54274 439 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 LRSAM1Q6UWE0 723 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 ANKLE2Q86XL3 938 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 F6X3S4 739 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 MCM2P49736 904 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 NEK4P51957 841 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
LRRTM1-205ENST00000417012 PDE1AP54750 535 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 PDCL3Q9H2J4 239 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 TMEM63CQ9P1W3 806 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 SYCE3A1L190 88 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 ZNF500O60304 480 aaPredicted RBP15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 MCCP23508 829 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 TMX3Q96JJ7 454 aa15.6■□□□□ 0.09
LRRTM1-205ENST00000417012 ESCO1Q5FWF5 840 aa15.59■□□□□ 0.09
LRRTM1-205ENST00000417012 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
LRRTM1-205ENST00000417012 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
LRRTM1-205ENST00000417012 CCT4P50991 539 aaKnown RBP15.58■□□□□ 0.09
LRRTM1-205ENST00000417012 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
LRRTM1-205ENST00000417012 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.08
LRRTM1-205ENST00000417012 GNAT3A8MTJ3 354 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 ZKSCAN5Q9Y2L8 839 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 R3HCC1Q9Y3T6 440 aaKnown RBP15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 MCM5P33992 734 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 IL17REQ8NFR9 667 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 ESYT1Q9BSJ8 1104 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
LRRTM1-205ENST00000417012 PSME1Q06323 249 aa15.56■□□□□ 0.08
LRRTM1-205ENST00000417012 NWD1Q149M9 1564 aa15.56■□□□□ 0.08
LRRTM1-205ENST00000417012 BRD1O95696 1058 aa15.56■□□□□ 0.08
LRRTM1-205ENST00000417012 GNAI2P04899 355 aa15.56■□□□□ 0.08
LRRTM1-205ENST00000417012 CSPP1Q1MSJ5 1256 aa15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 LTN1O94822 1766 aa15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 CUL4AQ13619 759 aa15.55■□□□□ 0.08
LRRTM1-205ENST00000417012 ANAPC15P60006 121 aa15.54■□□□□ 0.08
LRRTM1-205ENST00000417012 LRRCC1Q9C099 1032 aa15.54■□□□□ 0.08
LRRTM1-205ENST00000417012 TSHZ3Q63HK5 1081 aa15.54■□□□□ 0.08
LRRTM1-205ENST00000417012 INTS4Q96HW7 963 aaKnown RBP15.54■□□□□ 0.08
LRRTM1-205ENST00000417012 ANO2Q9NQ90 1003 aa15.54■□□□□ 0.08
LRRTM1-205ENST00000417012 MX1P20591 662 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms