RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-210ENST00000416778 HMOX1P09601 288 aa24.2■■□□□ 1.46
CPNE1-210ENST00000416778 NFATC2IPQ8NCF5 419 aa24.2■■□□□ 1.46
CPNE1-210ENST00000416778 KDM6AO15550 1401 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-210ENST00000416778 YY1P25490 414 aa24.19■■□□□ 1.46
CPNE1-210ENST00000416778 TUBGCP6Q96RT7 1819 aa24.19■■□□□ 1.46
CPNE1-210ENST00000416778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.18■■□□□ 1.46
CPNE1-210ENST00000416778 MSL1Q68DK7 614 aa24.18■■□□□ 1.46
CPNE1-210ENST00000416778 AKAP4Q5JQC9 854 aa24.17■■□□□ 1.46
CPNE1-210ENST00000416778 RBM42Q9BTD8 480 aaKnown RBP24.17■■□□□ 1.46
CPNE1-210ENST00000416778 COL24A1Q17RW2 1714 aa24.17■■□□□ 1.46
CPNE1-210ENST00000416778 C5P01031 1676 aa24.17■■□□□ 1.46
CPNE1-210ENST00000416778 SSFA2P28290 1259 aa24.16■■□□□ 1.46
CPNE1-210ENST00000416778 LGR6Q9HBX8 967 aa24.16■■□□□ 1.46
CPNE1-210ENST00000416778 UTRNP46939 3433 aa24.16■■□□□ 1.46
CPNE1-210ENST00000416778 TAF1LQ8IZX4 1826 aa24.15■■□□□ 1.46
CPNE1-210ENST00000416778 PHF14O94880 888 aa24.15■■□□□ 1.46
CPNE1-210ENST00000416778 KLHL34Q8N239 644 aa24.15■■□□□ 1.46
CPNE1-210ENST00000416778 C4BP0C0L5 1744 aa24.14■■□□□ 1.45
CPNE1-210ENST00000416778 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
CPNE1-210ENST00000416778 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
CPNE1-210ENST00000416778 GNPATO15228 680 aa24.13■■□□□ 1.45
CPNE1-210ENST00000416778 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
CPNE1-210ENST00000416778 RNMTO43148 476 aaKnown RBP24.11■■□□□ 1.45
CPNE1-210ENST00000416778 PTCD1O75127 700 aaKnown RBP24.11■■□□□ 1.45
CPNE1-210ENST00000416778 GPR162Q16538 588 aa24.1■■□□□ 1.45
CPNE1-210ENST00000416778 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
CPNE1-210ENST00000416778 SLC52A2Q9HAB3 445 aa24.1■■□□□ 1.45
CPNE1-210ENST00000416778 U2SURPO15042 1029 aaKnown RBP24.09■■□□□ 1.45
CPNE1-210ENST00000416778 RTCBQ9Y3I0 505 aaKnown RBP24.09■■□□□ 1.45
CPNE1-210ENST00000416778 CD2APQ9Y5K6 639 aa24.09■■□□□ 1.45
CPNE1-210ENST00000416778 RPS6KA4O75676 772 aa24.08■■□□□ 1.45
CPNE1-210ENST00000416778 ARHGEF1Q92888 912 aaKnown RBP24.07■■□□□ 1.44
CPNE1-210ENST00000416778 COL3A1P02461 1466 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-210ENST00000416778 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
CPNE1-210ENST00000416778 CNTNAP4Q9C0A0 1308 aa24.06■■□□□ 1.44
CPNE1-210ENST00000416778 UBR3Q6ZT12 1888 aa24.05■■□□□ 1.44
CPNE1-210ENST00000416778 ADRA2BP18089 450 aa24.03■■□□□ 1.44
CPNE1-210ENST00000416778 SLC39A6Q13433 755 aa24.03■■□□□ 1.44
CPNE1-210ENST00000416778 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CPNE1-210ENST00000416778 GOLGB1Q14789 3259 aaKnown RBP24.03■■□□□ 1.44
CPNE1-210ENST00000416778 CRKLP46109 303 aaKnown RBP24.02■■□□□ 1.44
CPNE1-210ENST00000416778 NLGN1Q8N2Q7 840 aa24.02■■□□□ 1.44
CPNE1-210ENST00000416778 IL17REQ8NFR9 667 aa24.02■■□□□ 1.44
CPNE1-210ENST00000416778 INTS5Q6P9B9 1019 aaKnown RBP24.01■■□□□ 1.43
CPNE1-210ENST00000416778 PELP1Q8IZL8 1130 aaKnown RBP24.01■■□□□ 1.43
CPNE1-210ENST00000416778 PHACTR3Q96KR7 559 aa24.01■■□□□ 1.43
CPNE1-210ENST00000416778 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
CPNE1-210ENST00000416778 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.432e-6■■■■□ 21.8
CPNE1-210ENST00000416778 RFC4P35249 363 aa24■■□□□ 1.43
CPNE1-210ENST00000416778 GNAT3A8MTJ3 354 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 MMP10P09238 476 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 GYS1P13807 737 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 DNAJC10Q8IXB1 793 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 GAS2L2Q8NHY3 880 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
CPNE1-210ENST00000416778 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
CPNE1-210ENST00000416778 GRIN3BO60391 1043 aa23.97■■□□□ 1.43
CPNE1-210ENST00000416778 CYP19A1P11511 503 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-210ENST00000416778 PRKAR2BP31323 418 aa23.96■■□□□ 1.43
CPNE1-210ENST00000416778 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-210ENST00000416778 FCHSD2O94868 740 aa23.95■■□□□ 1.42
CPNE1-210ENST00000416778 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
CPNE1-210ENST00000416778 MYH14Q7Z406 1995 aaKnown RBP23.94■■□□□ 1.42
CPNE1-210ENST00000416778 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-210ENST00000416778 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.422e-6■□□□□ 8.5
CPNE1-210ENST00000416778 CCDC87Q9NVE4 849 aa23.94■■□□□ 1.42
CPNE1-210ENST00000416778 MRC1P22897 1456 aa23.94■■□□□ 1.42
CPNE1-210ENST00000416778 SRP68Q9UHB9 627 aaKnown RBP23.92■■□□□ 1.42
CPNE1-210ENST00000416778 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-210ENST00000416778 TEFQ10587 303 aa23.91■■□□□ 1.42
CPNE1-210ENST00000416778 ADAMTS7Q9UKP4 1686 aa23.91■■□□□ 1.42
CPNE1-210ENST00000416778 FKBP8Q14318 412 aa23.9■■□□□ 1.42
CPNE1-210ENST00000416778 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
CPNE1-210ENST00000416778 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.42
CPNE1-210ENST00000416778 ZNF496Q96IT1 587 aaPredicted RBP23.89■■□□□ 1.41
CPNE1-210ENST00000416778 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
CPNE1-210ENST00000416778 SOS1Q07889 1333 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-210ENST00000416778 TM4SF1P30408 202 aa23.88■■□□□ 1.41
CPNE1-210ENST00000416778 TGFB2P61812 414 aa23.88■■□□□ 1.41
CPNE1-210ENST00000416778 TTC5Q8N0Z6 440 aa23.88■■□□□ 1.41
CPNE1-210ENST00000416778 PARP3Q9Y6F1 533 aa23.88■■□□□ 1.41
CPNE1-210ENST00000416778 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
CPNE1-210ENST00000416778 ZBTB1Q9Y2K1 713 aa23.86■■□□□ 1.41
CPNE1-210ENST00000416778 TJP1Q07157 1748 aa23.86■■□□□ 1.41
CPNE1-210ENST00000416778 CHD4Q14839 1912 aa23.86■■□□□ 1.41
CPNE1-210ENST00000416778 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 KCNQ3O43525 872 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 ZPR1O75312 459 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 STARD3NLO95772 234 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 USPL1Q5W0Q7 1092 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 TEX13AQ9BXU3 409 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-210ENST00000416778 NARFQ9UHQ1 456 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 WWC3Q9ULE0 1092 aa23.85■■□□□ 1.41
CPNE1-210ENST00000416778 BTBD11A6QL63 1104 aa23.84■■□□□ 1.41
CPNE1-210ENST00000416778 DDR1Q08345 913 aa23.84■■□□□ 1.41
CPNE1-210ENST00000416778 CICQ96RK0 1608 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-210ENST00000416778 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.41
CPNE1-210ENST00000416778 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms