RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 RGPD2P0DJD1 1756 aa12.55□□□□□ -0.4
RUNX1-206ENST00000416754 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
RUNX1-206ENST00000416754 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
RUNX1-206ENST00000416754 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
RUNX1-206ENST00000416754 RBM46Q8TBY0 533 aaKnown RBP12.54□□□□□ -0.4
RUNX1-206ENST00000416754 C5P01031 1676 aa12.54□□□□□ -0.4
RUNX1-206ENST00000416754 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 DPEP1P16444 411 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
RUNX1-206ENST00000416754 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 ITPK1Q13572 414 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 TOGARAM1Q9Y4F4 1720 aa12.53□□□□□ -0.4
RUNX1-206ENST00000416754 COG3Q96JB2 828 aa12.52□□□□□ -0.41
RUNX1-206ENST00000416754 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
RUNX1-206ENST00000416754 PCNTO95613 3336 aa12.52□□□□□ -0.41
RUNX1-206ENST00000416754 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 LOC102724428A0A0B4J2F2 783 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 GNPATO15228 680 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 FCHSD2O94868 740 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 SSFA2P28290 1259 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 SIK1P57059 783 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
RUNX1-206ENST00000416754 RRAGCQ9HB90 399 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
RUNX1-206ENST00000416754 KCNA3P22001 575 aa12.5□□□□□ -0.41
RUNX1-206ENST00000416754 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
RUNX1-206ENST00000416754 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
RUNX1-206ENST00000416754 ASAP1Q9ULH1 1129 aa12.5□□□□□ -0.41
RUNX1-206ENST00000416754 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
RUNX1-206ENST00000416754 WDR90Q96KV7 1748 aa12.5□□□□□ -0.41
RUNX1-206ENST00000416754 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 TGFB2P61812 414 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 FSTL1Q12841 308 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 GGNBP2Q9H3C7 697 aa12.48□□□□□ -0.41
RUNX1-206ENST00000416754 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
RUNX1-206ENST00000416754 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
RUNX1-206ENST00000416754 HSPA1AP0DMV8 641 aaKnown RBP12.47□□□□□ -0.41
RUNX1-206ENST00000416754 HSPA1BP0DMV9 641 aaKnown RBP12.47□□□□□ -0.41
RUNX1-206ENST00000416754 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
RUNX1-206ENST00000416754 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
RUNX1-206ENST00000416754 KIAA1551Q9HCM1 1747 aa12.46□□□□□ -0.41
RUNX1-206ENST00000416754 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
RUNX1-206ENST00000416754 TMF1P82094 1093 aa12.46□□□□□ -0.41
RUNX1-206ENST00000416754 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
RUNX1-206ENST00000416754 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
RUNX1-206ENST00000416754 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
RUNX1-206ENST00000416754 FYB1O15117 783 aa12.45□□□□□ -0.42
RUNX1-206ENST00000416754 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
RUNX1-206ENST00000416754 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
RUNX1-206ENST00000416754 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
RUNX1-206ENST00000416754 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
RUNX1-206ENST00000416754 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
RUNX1-206ENST00000416754 TRAPPC3LQ5T215 181 aa12.44□□□□□ -0.42
RUNX1-206ENST00000416754 NLGN1Q8N2Q7 840 aa12.44□□□□□ -0.42
RUNX1-206ENST00000416754 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
RUNX1-206ENST00000416754 MAP2P11137 1827 aaKnown RBP12.44□□□□□ -0.42
RUNX1-206ENST00000416754 GYS1P13807 737 aa12.43□□□□□ -0.42
RUNX1-206ENST00000416754 CHRNA5P30532 468 aa12.43□□□□□ -0.42
RUNX1-206ENST00000416754 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
RUNX1-206ENST00000416754 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
RUNX1-206ENST00000416754 ITGB4P16144 1822 aa12.43□□□□□ -0.42
RUNX1-206ENST00000416754 RTL1A6NKG5 1358 aa12.43□□□□□ -0.42
RUNX1-206ENST00000416754 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
RUNX1-206ENST00000416754 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
RUNX1-206ENST00000416754 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
RUNX1-206ENST00000416754 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
RUNX1-206ENST00000416754 INSRP06213 1382 aa12.42□□□□□ -0.42
RUNX1-206ENST00000416754 RASSF7Q02833 373 aa12.41□□□□□ -0.42
RUNX1-206ENST00000416754 DALRD3Q5D0E6 543 aaKnown RBP12.41□□□□□ -0.42
RUNX1-206ENST00000416754 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
RUNX1-206ENST00000416754 TESK2Q96S53 571 aa12.41□□□□□ -0.42
RUNX1-206ENST00000416754 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
RUNX1-206ENST00000416754 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
RUNX1-206ENST00000416754 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
RUNX1-206ENST00000416754 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
RUNX1-206ENST00000416754 SMG6Q86US8 1419 aaKnown RBP12.4□□□□□ -0.42
RUNX1-206ENST00000416754 KIF13BQ9NQT8 1826 aa12.4□□□□□ -0.42
RUNX1-206ENST00000416754 DDR1Q08345 913 aa12.4□□□□□ -0.42
RUNX1-206ENST00000416754 ST20-MTHFSA0A0A6YYL1 179 aa12.39□□□□□ -0.43
RUNX1-206ENST00000416754 RFC4P35249 363 aa12.39□□□□□ -0.43
RUNX1-206ENST00000416754 FKBP8Q14318 412 aa12.39□□□□□ -0.43
RUNX1-206ENST00000416754 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
RUNX1-206ENST00000416754 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
RUNX1-206ENST00000416754 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
RUNX1-206ENST00000416754 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
RUNX1-206ENST00000416754 PHKG2P15735 406 aa12.38□□□□□ -0.43
RUNX1-206ENST00000416754 EYA1Q99502 592 aa12.38□□□□□ -0.43
RUNX1-206ENST00000416754 POTECB2RU33 542 aa12.37□□□□□ -0.43
RUNX1-206ENST00000416754 SLC34A2O95436 690 aa12.37□□□□□ -0.43
RUNX1-206ENST00000416754 FLT4P35916 1363 aa12.37□□□□□ -0.43
RUNX1-206ENST00000416754 KDRP35968 1356 aa12.36□□□□□ -0.43
RUNX1-206ENST00000416754 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
RUNX1-206ENST00000416754 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
RUNX1-206ENST00000416754 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms