RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 MTHFSDQ2M296 383 aaKnown RBP17■□□□□ 0.31
CHEK2-210ENST00000416671 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
CHEK2-210ENST00000416671 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
CHEK2-210ENST00000416671 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
CHEK2-210ENST00000416671 EYA1Q99502 592 aa17■□□□□ 0.31
CHEK2-210ENST00000416671 PIK3C2AO00443 1686 aa17■□□□□ 0.31
CHEK2-210ENST00000416671 PSME1Q06323 249 aa17■□□□□ 0.31
CHEK2-210ENST00000416671 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
CHEK2-210ENST00000416671 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
CHEK2-210ENST00000416671 FLT4P35916 1363 aa16.99■□□□□ 0.31
CHEK2-210ENST00000416671 PDLIM2Q96JY6 352 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 C19orf44Q9H6X5 657 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
CHEK2-210ENST00000416671 CSPP1Q1MSJ5 1256 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 ZSCAN23Q3MJ62 389 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 ARHGAP45Q92619 1136 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
CHEK2-210ENST00000416671 RGPD1P0DJD0 1748 aa16.98■□□□□ 0.31
CHEK2-210ENST00000416671 CHL1O00533 1208 aa16.97■□□□□ 0.31
CHEK2-210ENST00000416671 DYNC1I1O14576 645 aa16.97■□□□□ 0.31
CHEK2-210ENST00000416671 CAVIN1Q6NZI2 390 aaKnown RBP16.97■□□□□ 0.31
CHEK2-210ENST00000416671 SMAP1Q8IYB5 467 aaPredicted RBP16.97■□□□□ 0.31
CHEK2-210ENST00000416671 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.97■□□□□ 0.31
CHEK2-210ENST00000416671 ABCC4O15439 1325 aa16.97■□□□□ 0.31
CHEK2-210ENST00000416671 MCTP1Q6DN14 999 aa16.97■□□□□ 0.31
CHEK2-210ENST00000416671 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
CHEK2-210ENST00000416671 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
CHEK2-210ENST00000416671 RBSNQ9H1K0 784 aa16.96■□□□□ 0.31
CHEK2-210ENST00000416671 TBC1D9Q6ZT07 1266 aa16.95■□□□□ 0.3
CHEK2-210ENST00000416671 ZKSCAN5Q9Y2L8 839 aa16.95■□□□□ 0.3
CHEK2-210ENST00000416671 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
CHEK2-210ENST00000416671 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
CHEK2-210ENST00000416671 ATF3P18847 181 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 HOXC9P31274 260 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 MCM5P33992 734 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 NUCB2P80303 420 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
CHEK2-210ENST00000416671 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 C1orf167Q5SNV9 1468 aa16.94■□□□□ 0.3
CHEK2-210ENST00000416671 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
CHEK2-210ENST00000416671 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
CHEK2-210ENST00000416671 IGSF1Q8N6C5 1336 aa16.93■□□□□ 0.3
CHEK2-210ENST00000416671 CRB1P82279 1406 aa16.93■□□□□ 0.3
CHEK2-210ENST00000416671 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
CHEK2-210ENST00000416671 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
CHEK2-210ENST00000416671 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
CHEK2-210ENST00000416671 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
CHEK2-210ENST00000416671 KDRP35968 1356 aa16.91■□□□□ 0.3
CHEK2-210ENST00000416671 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
CHEK2-210ENST00000416671 CCDC39Q9UFE4 941 aa16.91■□□□□ 0.3
CHEK2-210ENST00000416671 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
CHEK2-210ENST00000416671 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
CHEK2-210ENST00000416671 ARID3AQ99856 593 aa16.9■□□□□ 0.3
CHEK2-210ENST00000416671 MST1RQ04912 1400 aa16.9■□□□□ 0.3
CHEK2-210ENST00000416671 NECTIN2Q92692 538 aa16.89■□□□□ 0.3
CHEK2-210ENST00000416671 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
CHEK2-210ENST00000416671 RABEP1Q15276 862 aa16.89■□□□□ 0.29
CHEK2-210ENST00000416671 CDC45O75419 566 aa16.88■□□□□ 0.29
CHEK2-210ENST00000416671 G2E3Q7L622 706 aa16.88■□□□□ 0.29
CHEK2-210ENST00000416671 RGS12O14924 1447 aa16.88■□□□□ 0.29
CHEK2-210ENST00000416671 F6X3S4 739 aa16.87■□□□□ 0.29
CHEK2-210ENST00000416671 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
CHEK2-210ENST00000416671 PRPF40AO75400 957 aaKnown RBP16.87■□□□□ 0.29
CHEK2-210ENST00000416671 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
CHEK2-210ENST00000416671 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
CHEK2-210ENST00000416671 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
CHEK2-210ENST00000416671 MSH6P52701 1360 aa16.86■□□□□ 0.29
CHEK2-210ENST00000416671 XIRP1Q702N8 1843 aaKnown RBP16.86■□□□□ 0.29
CHEK2-210ENST00000416671 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
CHEK2-210ENST00000416671 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
CHEK2-210ENST00000416671 CWC22Q9HCG8 908 aaKnown RBP16.86■□□□□ 0.29
CHEK2-210ENST00000416671 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
CHEK2-210ENST00000416671 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
CHEK2-210ENST00000416671 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
CHEK2-210ENST00000416671 MEIS3Q99687 375 aa16.85■□□□□ 0.29
CHEK2-210ENST00000416671 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
CHEK2-210ENST00000416671 PKP1Q13835 747 aa16.85■□□□□ 0.29
CHEK2-210ENST00000416671 APBB1O00213 710 aa16.84■□□□□ 0.29
CHEK2-210ENST00000416671 IL17REQ8NFR9 667 aa16.84■□□□□ 0.29
CHEK2-210ENST00000416671 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
CHEK2-210ENST00000416671 PRDM10Q9NQV6 1147 aa16.84■□□□□ 0.29
CHEK2-210ENST00000416671 GCP02774 474 aa16.83■□□□□ 0.28
CHEK2-210ENST00000416671 UTP14CQ5TAP6 766 aaKnown RBP16.83■□□□□ 0.28
CHEK2-210ENST00000416671 SYCE3A1L190 88 aa16.83■□□□□ 0.28
CHEK2-210ENST00000416671 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
CHEK2-210ENST00000416671 CABLES1Q8TDN4 633 aa16.83■□□□□ 0.28
CHEK2-210ENST00000416671 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
CHEK2-210ENST00000416671 TMEM63CQ9P1W3 806 aa16.83■□□□□ 0.28
CHEK2-210ENST00000416671 DMTNQ08495 405 aa16.82■□□□□ 0.28
CHEK2-210ENST00000416671 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
CHEK2-210ENST00000416671 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
CHEK2-210ENST00000416671 LTN1O94822 1766 aa16.82■□□□□ 0.28
CHEK2-210ENST00000416671 PTPRCP08575 1304 aa16.82■□□□□ 0.28
CHEK2-210ENST00000416671 ZHX1Q9UKY1 873 aaPredicted RBP16.82■□□□□ 0.28
CHEK2-210ENST00000416671 NFAT5O94916 1531 aa16.81■□□□□ 0.28
CHEK2-210ENST00000416671 KIAA2012Q0VF49 1180 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms