RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 POTEAQ6S8J7 498 aa10.04□□□□□ -0.8
THUMPD3-202ENST00000416603 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
THUMPD3-202ENST00000416603 NCOA3Q9Y6Q9 1424 aa10.04□□□□□ -0.8
THUMPD3-202ENST00000416603 CLTCL1P53675 1640 aa10.04□□□□□ -0.8
THUMPD3-202ENST00000416603 ATF3P18847 181 aa10.03□□□□□ -0.8
THUMPD3-202ENST00000416603 FAM160A2Q8N612 972 aaPredicted RBP10.03□□□□□ -0.8
THUMPD3-202ENST00000416603 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
THUMPD3-202ENST00000416603 NALCNQ8IZF0 1738 aa10.02□□□□□ -0.8
THUMPD3-202ENST00000416603 SETBP1Q9Y6X0 1596 aa10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 PTPRUQ92729 1446 aa10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 MSS51Q4VC12 460 aa10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 ZNF326Q5BKZ1 582 aaKnown RBP10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 MEX3CQ5U5Q3 659 aaKnown RBP10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 LRP6O75581 1613 aa10.02□□□□□ -0.81
THUMPD3-202ENST00000416603 NHSL1Q5SYE7 1610 aa10.01□□□□□ -0.81
THUMPD3-202ENST00000416603 FDX1P10109 184 aa10.01□□□□□ -0.81
THUMPD3-202ENST00000416603 AMOTL2Q9Y2J4 779 aa10.01□□□□□ -0.81
THUMPD3-202ENST00000416603 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 NDUFV2P19404 249 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 USB1Q9BQ65 265 aaKnown RBP10□□□□□ -0.81
THUMPD3-202ENST00000416603 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
THUMPD3-202ENST00000416603 C19orf44Q9H6X5 657 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 PODXL2Q9NZ53 605 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 NEXMIFQ5QGS0 1516 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 ASXL1Q8IXJ9 1541 aa10□□□□□ -0.81
THUMPD3-202ENST00000416603 DIXDC1Q155Q3 683 aa9.99□□□□□ -0.81
THUMPD3-202ENST00000416603 FCF1Q9Y324 198 aaKnown RBP9.99□□□□□ -0.81
THUMPD3-202ENST00000416603 SPATA31A6Q5VVP1 1343 aa9.99□□□□□ -0.81
THUMPD3-202ENST00000416603 DCCP43146 1447 aa9.99□□□□□ -0.81
THUMPD3-202ENST00000416603 PLA2G2CQ5R387 149 aa9.98□□□□□ -0.81
THUMPD3-202ENST00000416603 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
THUMPD3-202ENST00000416603 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
THUMPD3-202ENST00000416603 NUTM2BA6NNL0 878 aaPredicted RBP9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 NUTM2EB1AL46 878 aaPredicted RBP9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 SLC19A1P41440 591 aa9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 BRINP3Q76B58 766 aa9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 NUTM2AQ8IVF1 878 aaPredicted RBP9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 EMID1Q96A84 441 aaPredicted RBP9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 MST1RQ04912 1400 aa9.97□□□□□ -0.81
THUMPD3-202ENST00000416603 PPLO60437 1756 aa9.96□□□□□ -0.81
THUMPD3-202ENST00000416603 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
THUMPD3-202ENST00000416603 TRIM52Q96A61 297 aa9.96□□□□□ -0.82
THUMPD3-202ENST00000416603 METP08581 1390 aa9.96□□□□□ -0.82
THUMPD3-202ENST00000416603 ADGRL3Q9HAR2 1447 aa9.96□□□□□ -0.82
THUMPD3-202ENST00000416603 ZNF772Q68DY9 489 aaPredicted RBP9.95□□□□□ -0.82
THUMPD3-202ENST00000416603 RETREG3Q86VR2 466 aa9.95□□□□□ -0.82
THUMPD3-202ENST00000416603 GPBP1L1Q9HC44 474 aaPredicted RBP9.95□□□□□ -0.82
THUMPD3-202ENST00000416603 NAIPQ13075 1403 aa9.95□□□□□ -0.82
THUMPD3-202ENST00000416603 RRBP1Q9P2E9 1410 aaKnown RBP9.95□□□□□ -0.82
THUMPD3-202ENST00000416603 MMP16P51512 607 aa9.94□□□□□ -0.82
THUMPD3-202ENST00000416603 RSBN1LQ6PCB5 846 aaPredicted RBP9.94□□□□□ -0.82
THUMPD3-202ENST00000416603 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
THUMPD3-202ENST00000416603 DXOO77932 396 aaKnown RBP9.93□□□□□ -0.82
THUMPD3-202ENST00000416603 SPRYD7Q5W111 196 aa9.93□□□□□ -0.82
THUMPD3-202ENST00000416603 KDM4CQ9H3R0 1056 aa9.93□□□□□ -0.82
THUMPD3-202ENST00000416603 SETD5Q9C0A6 1442 aa9.92□□□□□ -0.82
THUMPD3-202ENST00000416603 PTCH1Q13635 1447 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 AFF2P51816 1311 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 SPTLC1O15269 473 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 JUNDP17535 347 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 GJA5P36382 358 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 MTMR2Q13614 643 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 MYSM1Q5VVJ2 828 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 DDX17Q92841 729 aaKnown RBP9.91□□□□□ -0.82
THUMPD3-202ENST00000416603 IFT172Q9UG01 1749 aa9.9□□□□□ -0.82
THUMPD3-202ENST00000416603 LAMC1P11047 1609 aa9.9□□□□□ -0.82
THUMPD3-202ENST00000416603 RXRBP28702 533 aa9.9□□□□□ -0.82
THUMPD3-202ENST00000416603 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
THUMPD3-202ENST00000416603 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
THUMPD3-202ENST00000416603 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
THUMPD3-202ENST00000416603 C1orf167Q5SNV9 1468 aa9.9□□□□□ -0.83
THUMPD3-202ENST00000416603 HFM1A2PYH4 1435 aa9.9□□□□□ -0.83
THUMPD3-202ENST00000416603 PNPLA6Q8IY17 1366 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 GFRA3O60609 400 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 RPIAP49247 311 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 CSPP1Q1MSJ5 1256 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 C8orf37Q96NL8 207 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
THUMPD3-202ENST00000416603 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
THUMPD3-202ENST00000416603 MARF1Q9Y4F3 1742 aaKnown RBP9.88□□□□□ -0.83
THUMPD3-202ENST00000416603 CDK12Q9NYV4 1490 aaPredicted RBP9.88□□□□□ -0.83
THUMPD3-202ENST00000416603 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
THUMPD3-202ENST00000416603 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
THUMPD3-202ENST00000416603 CDC42BPGQ6DT37 1551 aa9.88□□□□□ -0.83
THUMPD3-202ENST00000416603 KNDC1Q76NI1 1749 aa9.87□□□□□ -0.83
THUMPD3-202ENST00000416603 SPDYE5A6NIY4 337 aa9.87□□□□□ -0.83
THUMPD3-202ENST00000416603 LAPTM4AQ15012 233 aa9.87□□□□□ -0.83
THUMPD3-202ENST00000416603 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
THUMPD3-202ENST00000416603 LIMD1Q9UGP4 676 aa9.87□□□□□ -0.83
THUMPD3-202ENST00000416603 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
THUMPD3-202ENST00000416603 RPGRIP1LQ68CZ1 1315 aa9.86□□□□□ -0.83
THUMPD3-202ENST00000416603 COL22A1Q8NFW1 1626 aaPredicted RBP9.86□□□□□ -0.83
THUMPD3-202ENST00000416603 RGS12O14924 1447 aa9.86□□□□□ -0.83
THUMPD3-202ENST00000416603 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
THUMPD3-202ENST00000416603 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
THUMPD3-202ENST00000416603 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms