RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CABP4P57796 275 aa23.85■■□□□ 1.41
PDLIM2-208ENST00000416159 MSL1Q68DK7 614 aa23.85■■□□□ 1.41
PDLIM2-208ENST00000416159 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
PDLIM2-208ENST00000416159 SSFA2P28290 1259 aa23.84■■□□□ 1.41
PDLIM2-208ENST00000416159 ITPK1Q13572 414 aa23.84■■□□□ 1.41
PDLIM2-208ENST00000416159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-208ENST00000416159 KDM6AO15550 1401 aaPredicted RBP23.83■■□□□ 1.4
PDLIM2-208ENST00000416159 UBR3Q6ZT12 1888 aa23.82■■□□□ 1.4
PDLIM2-208ENST00000416159 PHF14O94880 888 aa23.82■■□□□ 1.4
PDLIM2-208ENST00000416159 GPR162Q16538 588 aa23.82■■□□□ 1.4
PDLIM2-208ENST00000416159 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
PDLIM2-208ENST00000416159 RBM42Q9BTD8 480 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-208ENST00000416159 GNPATO15228 680 aa23.8■■□□□ 1.4
PDLIM2-208ENST00000416159 DIAPH1O60610 1272 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-208ENST00000416159 AKAP4Q5JQC9 854 aa23.79■■□□□ 1.4
PDLIM2-208ENST00000416159 NLGN2Q8NFZ4 835 aa23.79■■□□□ 1.4
PDLIM2-208ENST00000416159 SMIM5Q71RC9 77 aa23.78■■□□□ 1.4
PDLIM2-208ENST00000416159 NFATC2IPQ8NCF5 419 aa23.78■■□□□ 1.4
PDLIM2-208ENST00000416159 SLC4A9Q96Q91 983 aa23.78■■□□□ 1.4
PDLIM2-208ENST00000416159 CHD4Q14839 1912 aa23.77■■□□□ 1.4
PDLIM2-208ENST00000416159 HMOX1P09601 288 aa23.77■■□□□ 1.4
PDLIM2-208ENST00000416159 RC3H1Q5TC82 1133 aaKnown RBP23.77■■□□□ 1.4
PDLIM2-208ENST00000416159 ZNF831Q5JPB2 1677 aa23.76■■□□□ 1.39
PDLIM2-208ENST00000416159 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
PDLIM2-208ENST00000416159 CD2APQ9Y5K6 639 aa23.76■■□□□ 1.39
PDLIM2-208ENST00000416159 CNGB1Q14028 1251 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-208ENST00000416159 RTCBQ9Y3I0 505 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-208ENST00000416159 TRAPPC3LQ5T215 181 aa23.73■■□□□ 1.39
PDLIM2-208ENST00000416159 CNTNAP4Q9C0A0 1308 aa23.73■■□□□ 1.39
PDLIM2-208ENST00000416159 SCN11AQ9UI33 1791 aa23.73■■□□□ 1.39
PDLIM2-208ENST00000416159 PTCD1O75127 700 aaKnown RBP23.72■■□□□ 1.39
PDLIM2-208ENST00000416159 RNMTO43148 476 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-208ENST00000416159 ADRA2BP18089 450 aa23.71■■□□□ 1.39
PDLIM2-208ENST00000416159 SLC52A2Q9HAB3 445 aa23.71■■□□□ 1.39
PDLIM2-208ENST00000416159 GRIN3BO60391 1043 aa23.7■■□□□ 1.38
PDLIM2-208ENST00000416159 RPS6KA4O75676 772 aa23.7■■□□□ 1.38
PDLIM2-208ENST00000416159 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
PDLIM2-208ENST00000416159 LGR6Q9HBX8 967 aa23.7■■□□□ 1.38
PDLIM2-208ENST00000416159 U2SURPO15042 1029 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-208ENST00000416159 ZNF784Q8NCA9 323 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-208ENST00000416159 ARHGEF1Q92888 912 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-208ENST00000416159 COL3A1P02461 1466 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-208ENST00000416159 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-208ENST00000416159 NLGN1Q8N2Q7 840 aa23.67■■□□□ 1.38
PDLIM2-208ENST00000416159 MYH14Q7Z406 1995 aaKnown RBP23.66■■□□□ 1.38
PDLIM2-208ENST00000416159 YBX3P16989 372 aaKnown RBP eCLIP23.66■■□□□ 1.38
PDLIM2-208ENST00000416159 RFC4P35249 363 aa23.66■■□□□ 1.38
PDLIM2-208ENST00000416159 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
PDLIM2-208ENST00000416159 CRKLP46109 303 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-208ENST00000416159 MMP10P09238 476 aa23.64■■□□□ 1.37
PDLIM2-208ENST00000416159 MRC1P22897 1456 aa23.63■■□□□ 1.37
PDLIM2-208ENST00000416159 GAS2L2Q8NHY3 880 aa23.63■■□□□ 1.37
PDLIM2-208ENST00000416159 VIRMAQ69YN4 1812 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-208ENST00000416159 NUDCQ9Y266 331 aa23.62■■□□□ 1.37
PDLIM2-208ENST00000416159 GYS1P13807 737 aa23.61■■□□□ 1.37
PDLIM2-208ENST00000416159 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
PDLIM2-208ENST00000416159 CICQ96RK0 1608 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-208ENST00000416159 DNAJC10Q8IXB1 793 aa23.6■■□□□ 1.37
PDLIM2-208ENST00000416159 ADAMTS7Q9UKP4 1686 aa23.6■■□□□ 1.37
PDLIM2-208ENST00000416159 TJP1Q07157 1748 aa23.59■■□□□ 1.37
PDLIM2-208ENST00000416159 GNAT3A8MTJ3 354 aa23.59■■□□□ 1.37
PDLIM2-208ENST00000416159 INTS5Q6P9B9 1019 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-208ENST00000416159 PPP2R1AP30153 589 aa23.58■■□□□ 1.37
PDLIM2-208ENST00000416159 CCDC87Q9NVE4 849 aa23.58■■□□□ 1.37
PDLIM2-208ENST00000416159 VSIG10Q8N0Z9 540 aa23.57■■□□□ 1.36
PDLIM2-208ENST00000416159 PARP3Q9Y6F1 533 aa23.57■■□□□ 1.36
PDLIM2-208ENST00000416159 UTRNP46939 3433 aa23.57■■□□□ 1.36
PDLIM2-208ENST00000416159 CYP19A1P11511 503 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-208ENST00000416159 TEFQ10587 303 aa23.56■■□□□ 1.36
PDLIM2-208ENST00000416159 PRKAR2BP31323 418 aa23.55■■□□□ 1.36
PDLIM2-208ENST00000416159 TGFB2P61812 414 aa23.55■■□□□ 1.36
PDLIM2-208ENST00000416159 TTC5Q8N0Z6 440 aa23.55■■□□□ 1.36
PDLIM2-208ENST00000416159 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
PDLIM2-208ENST00000416159 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
PDLIM2-208ENST00000416159 USP42Q9H9J4 1324 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-208ENST00000416159 C4AP0C0L4 1744 aa23.54■■□□□ 1.36
PDLIM2-208ENST00000416159 SRP68Q9UHB9 627 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-208ENST00000416159 KCPQ6ZWJ8 1503 aa23.54■■□□□ 1.36
PDLIM2-208ENST00000416159 U2AF1L5P0DN76 240 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-208ENST00000416159 U2AF1Q01081 240 aaKnown RBP eCLIP23.53■■□□□ 1.36
PDLIM2-208ENST00000416159 PHACTR3Q96KR7 559 aa23.53■■□□□ 1.36
PDLIM2-208ENST00000416159 SOS1Q07889 1333 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-208ENST00000416159 KIF13BQ9NQT8 1826 aa23.52■■□□□ 1.36
PDLIM2-208ENST00000416159 ZPR1O75312 459 aa23.52■■□□□ 1.36
PDLIM2-208ENST00000416159 FCHSD2O94868 740 aa23.51■■□□□ 1.35
PDLIM2-208ENST00000416159 FKBP8Q14318 412 aa23.51■■□□□ 1.35
PDLIM2-208ENST00000416159 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
PDLIM2-208ENST00000416159 C10orf71Q711Q0 1435 aa23.5■■□□□ 1.35
PDLIM2-208ENST00000416159 ZNF790Q6PG37 636 aa23.5■■□□□ 1.35
PDLIM2-208ENST00000416159 PXDNLA1KZ92 1463 aa23.49■■□□□ 1.35
PDLIM2-208ENST00000416159 STARD3NLO95772 234 aa23.49■■□□□ 1.35
PDLIM2-208ENST00000416159 TEX13AQ9BXU3 409 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-208ENST00000416159 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
PDLIM2-208ENST00000416159 UBR2Q8IWV8 1755 aa23.49■■□□□ 1.35
PDLIM2-208ENST00000416159 CEMIPQ8WUJ3 1361 aa23.49■■□□□ 1.35
PDLIM2-208ENST00000416159 A0A0G2JLW4 131 aa23.48■■□□□ 1.35
PDLIM2-208ENST00000416159 USPL1Q5W0Q7 1092 aa23.48■■□□□ 1.35
PDLIM2-208ENST00000416159 NARFQ9UHQ1 456 aa23.48■■□□□ 1.35
PDLIM2-208ENST00000416159 TM4SF1P30408 202 aa23.47■■□□□ 1.35
PDLIM2-208ENST00000416159 ZNF496Q96IT1 587 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms