RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 PPP4R2Q9NY27 417 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 LRP6O75581 1613 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 EXOC5O00471 708 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 CABP4P57796 275 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 CDCA7Q9BWT1 371 aaPredicted RBP16.1■□□□□ 0.17
PRAMEF9-201ENST00000415919 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
PRAMEF9-201ENST00000415919 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
PRAMEF9-201ENST00000415919 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
PRAMEF9-201ENST00000415919 DISP2A7MBM2 1401 aa16.09■□□□□ 0.17
PRAMEF9-201ENST00000415919 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.17
PRAMEF9-201ENST00000415919 PDE3AQ14432 1141 aa16.08■□□□□ 0.17
PRAMEF9-201ENST00000415919 FNBP4Q8N3X1 1017 aaPredicted RBP16.08■□□□□ 0.17
PRAMEF9-201ENST00000415919 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.17
PRAMEF9-201ENST00000415919 USP21Q9UK80 565 aa16.08■□□□□ 0.17
PRAMEF9-201ENST00000415919 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
PRAMEF9-201ENST00000415919 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
PRAMEF9-201ENST00000415919 KCNQ3O43525 872 aa16.08■□□□□ 0.16
PRAMEF9-201ENST00000415919 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
PRAMEF9-201ENST00000415919 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
PRAMEF9-201ENST00000415919 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
PRAMEF9-201ENST00000415919 MS4A1P11836 297 aa16.07■□□□□ 0.16
PRAMEF9-201ENST00000415919 VPS72Q15906 364 aa16.07■□□□□ 0.16
PRAMEF9-201ENST00000415919 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
PRAMEF9-201ENST00000415919 BRPF1P55201 1214 aaPredicted RBP16.06■□□□□ 0.16
PRAMEF9-201ENST00000415919 FTSJ3Q8IY81 847 aaKnown RBP16.06■□□□□ 0.16
PRAMEF9-201ENST00000415919 PANK1Q8TE04 598 aa16.06■□□□□ 0.16
PRAMEF9-201ENST00000415919 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
PRAMEF9-201ENST00000415919 BCL9LQ86UU0 1499 aa16.06■□□□□ 0.16
PRAMEF9-201ENST00000415919 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
PRAMEF9-201ENST00000415919 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
PRAMEF9-201ENST00000415919 DDB1Q16531 1140 aa16.05■□□□□ 0.16
PRAMEF9-201ENST00000415919 ATF7IPQ6VMQ6 1270 aa16.05■□□□□ 0.16
PRAMEF9-201ENST00000415919 BARGINQ6ZT62 677 aa16.05■□□□□ 0.16
PRAMEF9-201ENST00000415919 TNNQ9UQP3 1299 aa16.05■□□□□ 0.16
PRAMEF9-201ENST00000415919 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 ZNF790Q6PG37 636 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 DZIP1LQ8IYY4 767 aaKnown RBP16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 STK31Q9BXU1 1019 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 SIPA1L3O60292 1781 aaPredicted RBP16.04■□□□□ 0.16
PRAMEF9-201ENST00000415919 TRIM27P14373 513 aa16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 COG6Q9Y2V7 657 aa16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 MRC1P22897 1456 aa16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 FAM98CQ17RN3 349 aaKnown RBP16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 CHMP4AQ9BY43 222 aa16.03■□□□□ 0.16
PRAMEF9-201ENST00000415919 AFF2P51816 1311 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 WNK3Q9BYP7 1800 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 HOXB7P09629 217 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 ARHGAP45Q92619 1136 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 TNS2Q63HR2 1409 aa16.02■□□□□ 0.16
PRAMEF9-201ENST00000415919 A0A0G2JS52 829 aa16.01■□□□□ 0.15
PRAMEF9-201ENST00000415919 RLBP1P12271 317 aa16.01■□□□□ 0.15
PRAMEF9-201ENST00000415919 TMOD3Q9NYL9 352 aa16.01■□□□□ 0.15
PRAMEF9-201ENST00000415919 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
PRAMEF9-201ENST00000415919 API5Q9BZZ5 524 aaKnown RBP16■□□□□ 0.15
PRAMEF9-201ENST00000415919 MVPQ14764 893 aaKnown RBP15.99■□□□□ 0.15
PRAMEF9-201ENST00000415919 FMNL2Q96PY5 1086 aa15.99■□□□□ 0.15
PRAMEF9-201ENST00000415919 ITPRIPQ8IWB1 547 aa15.98■□□□□ 0.15
PRAMEF9-201ENST00000415919 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
PRAMEF9-201ENST00000415919 PTPRCP08575 1304 aa15.98■□□□□ 0.15
PRAMEF9-201ENST00000415919 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
PRAMEF9-201ENST00000415919 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
PRAMEF9-201ENST00000415919 TMEM57Q8N5G2 664 aa15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 G2E3Q7L622 706 aa15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 MARCH10Q8NA82 808 aaPredicted RBP15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 GJD4Q96KN9 370 aaPredicted RBP15.97■□□□□ 0.15
PRAMEF9-201ENST00000415919 SNRPA1P09661 255 aaKnown RBP15.96■□□□□ 0.15
PRAMEF9-201ENST00000415919 PIGBQ92521 554 aa15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 DDX19BQ9UMR2 479 aa15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 TOGARAM1Q9Y4F4 1720 aa15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 FLIIQ13045 1269 aa15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 QTRT2Q9H974 415 aaKnown RBP15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 DBF4Q9UBU7 674 aaPredicted RBP15.95■□□□□ 0.14
PRAMEF9-201ENST00000415919 ABCC4O15439 1325 aa15.94■□□□□ 0.14
PRAMEF9-201ENST00000415919 PTCD1O75127 700 aaKnown RBP15.94■□□□□ 0.14
PRAMEF9-201ENST00000415919 PRIM1P49642 420 aaKnown RBP15.94■□□□□ 0.14
PRAMEF9-201ENST00000415919 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
PRAMEF9-201ENST00000415919 AAMPQ13685 434 aa15.93■□□□□ 0.14
PRAMEF9-201ENST00000415919 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
PRAMEF9-201ENST00000415919 ATRNO75882 1429 aa15.93■□□□□ 0.14
PRAMEF9-201ENST00000415919 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
PRAMEF9-201ENST00000415919 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
PRAMEF9-201ENST00000415919 ANXA1P04083 346 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms